Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01134 AGAAAGGGGAAAACAACTAAATATTACGATACTCACTAATGCTTATCCCAAAATCAAATTATATTCTCTCACACTTTTTAAATAAATTCTCAACGCCCCTCTCATAATCAATTCACACTCCAAAATGGTCTCTTCTTCTTCTTCGCAGAAGATTCTGGTCACCGGCGGGGCCGGTTTCATAGGTACACACACGGTTGTTCAACTTCTCAAAGATGGCTTCACTGTCTCAATAATCGATAATTTCGACAATTCAGTCATGGAAGCCGTCCACCGTGTCCGCCAACTGGTGGGCCCTCAGCTTTCTCAGAATCTCCAATTCACCCAGGCTGATCTCAGGAACAGGGATGACTTGGAGACACTCTTTTCCAAAACAACATTTGATGCCGTTATCCACTTTGCTGGCCTCAAAGCGGTTGCTGAAAGCGTTGCCAAGCCACGTCGCTATTTTGATTTTAATTTGGTCGGAACCATCAACCTCTACCAAGTTATGGCCAAGTATAACTGTAAGAAGATGGTATTCTCATCGTCTGCAACCGTTTATGGCCAACCTGAAAAGATACCGTGCTTGGAGGATTTCAACTTAAAAGCTATGAATCCCTATGGACGGACCAAGCTCTTCCTGGAAGAAATTGCCCGAGATATTCAGAAAGCTGAGCCAGATTGGAAGATCATATTGCTGAGATACTTCAATCCAGTCGGGGCTCATGAAAGTGGTCAACTCGGTGAAGATCCTAAGGGCATTCCAAATAACCTCATGCCTTACATCCAGCAAGTAGCTGTTGGAAGATTGCCCGAACTCAACGTATACGGCTATGATTACCCCACAAGGGATGGCTCTGCGATCCGGGACTATATCCATGTGATGGACTTAGCCGATGGTCATATTGCGGCCTTGCGAAAGCTCTTTACAACAGAGAACATAGGTGAATTGTTCTTTTTCTTCCCTGGACAGTTTTGTGTGTCTTCGTGTTTTGATATTTATAGGTTGATTTCTTTTTTCAGTTGTACTGCTTACAACCTAGGAACAGGTCGTGGAACATCTGTGCGTGAAATGGTAGCAGCATTTGAAAAGGCTTCTGGAAAGAAAATTCCGGTGAAATTATGTCCAAGAAGACCGGGAGATGCTACGGAGGTTTATGCATCTACAGAGAAAGCTGAGAAAGAGCTTGGTTGGAAGGCAAAATATGGTGTGGAGGAGATGTGCAGAGACCAATGGAATTGGGCAAAAAACAATCCCTGGGGTTACACGGGGAAGCCTTGAATTAACTTGAGAAATATATTGCTCATCTACAAATGTTTTCAACAAAAATAGGCATCTCTTTACATATTCCTTTTATGTTGGATGATTTGTTTAGGTAATTCGATGTATAATCTTGAGAATAAAAATTTGGCAGCATTCCAAGAAGTAAAAGCTATATATATTTAAACAATATTTTGAAATTAGACTGCCAACTATTGCTTTGATATTTAGATGTTTATCCAACCGGCCATCCTTTTTGAAAGGTGTAAATACTCTTCCTGTTTATTAAGTCCGGA 1536 0.4154 MVSSSSSQKILVTGGAGFIGTHTVVQLLKDGFTVSIIDNFDNSVMEAVHRVRQLVGPQLSQNLQFTQADLRNRDDLETLFSKTTFDAVIHFAGLKAVAESVAKPRRYFDFNLVGTINLYQVMAKYNCKKMVFSSSATVYGQPEKIPCLEDFNLKAMNPYGRTKLFLEEIARDIQKAEPDWKIILLRYFNPVGAHESGQLGEDPKGIPNNLMPYIQQVAVGRLPELNVYGYDYPTRDGSAIRDYIHVMDLADGHIAALRKLFTTENIGELFFFFPGQFCVSSCFDIYRLISFFSCTAYNLGTGRGTSVREMVAAFEKASGKKIPVKLCPRRPGDATEVYASTEKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGYTGKP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01134 378 FunFam UDP-glucose 4-epimerase 10 205 - -
Pste3g01134 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 7 375 - -
Pste3g01134 378 Gene3D - 199 367 - -
Pste3g01134 378 FunFam UDP-glucose 4-epimerase 4 310 378 - -
Pste3g01134 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 374 IPR036291 -
Pste3g01134 378 Pfam GDP-mannose 4,6 dehydratase 11 362 IPR016040 -
Pste3g01134 378 NCBIfam UDP-glucose 4-epimerase GalE 9 264 IPR005886 GO:0003978|GO:0006012
Pste3g01134 378 Gene3D - 10 307 - -
Pste3g01134 378 CDD UDP_G4E_1_SDR_e 9 368 IPR005886 GO:0003978|GO:0006012
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01134 Pste-Chr3 7248755 7251610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01134 10 366 Miscellaneous Gene Families AT4G00110 25.886 1.18e-18 85.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01134 3 7248755 7251610 Pste3g01134 3 7248755 7251610 ECH