Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01121 CTGGATTCTAATTTCTAAGTCGTAAGTTGTAACGAAACCGCAAAGACCTTGCTTCCATTCAGGGTTAGCTTCTCTCTCTTGATGCAACGTTGCACTTGCATATCATCGCTACTTCGTTTCGACTTTTCTTTACTTCCCTTCCAAGATTAGGTCATTCATCACTCAATACTTACTTAACATCTTAGGGTTGCTACTTCCCTTACTGAACCAGGATTAGGGTTTTGTCTAATTCTCAATTTCTATTGTCTCCACCGTGGATTTGCACACAATTTGAAAATTTTAGACCACCGTGTGAGATGGCGCTGCAGGAGAGGCTAGACAAGTTCAAGAGGCAGCAGGAGAAGTGCCAGTCGACGCTGTCGAGCATTGCAGCGAGCAAGGCCGCAGCGAGCCAAAAATCTTCGTCCGCATCCGCTAATGGAAGAAACGCTGCCCCTGCGGTTAAGTTTTCCAACGATACAGAGAGGCTTCAGCATATCAACAGCATACGCAAAGCTCCCGTGGGTGCTCAGATGAAGCGTGTTATTGATCTCCTTCTGGAGACACGACAAGCTTTAACACCAGAGCAGATAAATGAGGCATGCTATGTTGACATGAAGGCTAACAAAGATGTCTTTGAGAATCTGAGGAAAAACCCAAAAGTGAACTATGATGGGCAACGATTCTCTTACAAGTCAAAGTACGGTCTTAAGGACAAAACAGAGCTTCTTCAACTGATACGGAAGTATCCTGAAGGTCTTGCTGTTATTGACTTAAAGGATGCTTACCCCACTGTGATGGAAGATTTGCAGGCTCTGAAAGCTGCAGGGCAGATTTGGCTGCTATCAAACTTTGATTCACAAGAAGACATTGCCTACCCTAACGATCCTAAAGTACACATTAAGGTGGATGATGATCTAAAACAGCTTTTCCGGAGTATTGAATTGCCTCGTGATATGATTGATATAGAGAGGGATCTTCAAAAGAATGGAATGAAGCCCGCTACCAACACTGCAAAGAGGAGGAGTGCAGCTCAAATTCAAGGCATTTCTTCCAAGCCAAAGCCTAAGAAGAAGAAGAGTGAGATCAGCAAGAGAACGAAGCTGACCAATGCCCATCTTCCAGAGCTTTTTCAGAATTTAAACAGTTCCTGATTAAGGATCAGCAGCAAGTGTGGGTTTAGTCCAAACAGATAATTTATCAGCCAGCCTAGATTAGCAGTGAGAAAATTCAGTAGTTTTTTATGCACTGCCCAACTCTTAATCTGTTTATTGTTATACATCAAGGCTACAAGCTAATCGACTGGTGTGATATGTAATGTAACAACTCATAATAGTTTGTGAATCCTTGTATATTAAAACCCTGTTATTTTAAATTCCTAACCTTGTAACTTTTTATACATAAAATCACTAG 1392 0.4195 MALQERLDKFKRQQEKCQSTLSSIAASKAAASQKSSSASANGRNAAPAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLLETRQALTPEQINEACYVDMKANKDVFENLRKNPKVNYDGQRFSYKSKYGLKDKTELLQLIRKYPEGLAVIDLKDAYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPKVHIKVDDDLKQLFRSIELPRDMIDIERDLQKNGMKPATNTAKRRSAAQIQGISSKPKPKKKKSEISKRTKLTNAHLPELFQNLNSS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01121 278 MobiDBLite consensus disorder prediction 30 48 - -
Pste3g01121 278 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 57 132 IPR003166 GO:0006367
Pste3g01121 278 PIRSF TFIIE-beta 1 277 IPR016656 GO:0005673|GO:0006367
Pste3g01121 278 MobiDBLite consensus disorder prediction 30 51 - -
Pste3g01121 278 MobiDBLite consensus disorder prediction 225 278 - -
Pste3g01121 278 Pfam TFIIE beta subunit core domain 71 129 IPR003166 GO:0006367
Pste3g01121 278 MobiDBLite consensus disorder prediction 225 244 - -
Pste3g01121 278 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 276 IPR016656 GO:0005673|GO:0006367
Pste3g01121 278 Pfam TFA2 Winged helix domain 2 132 189 IPR040501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01121 Pste-Chr3 7178278 7181047 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01121 3 7178278 7181047 Pste3g01121 3 7178278 7181047 ECH
Pste1g00349 1 1238805 1242386 Pste3g01121 3 7178278 7181047 PCT