Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01070 GAGCAACATAATTAGAGGATTGAAGTGTGTTATTGGAGGATTAAATTGAGAAGTATATTTATTTTCAGATACATTTATAAGTTTGAAGGATTATATAAAAGGCTGATGAAAAATAACGAGGTTCTTCATCTGGCAGAAAGTTTTACAATTACAAAATCAAATTTGTGGTGTGACAGTGGCGGTGGGTGTGAGAATGGGGAATCGACGCTTCACTCAGGTCGCAACCAGCGATGAGGAGGACGAAGCGCCTCCGCCGCCGCCGCCTCCGAAGCAGCAATCTTCGGCCAGTGCCTCCGAAGAGAACCGTCCGAAGAAGCAGCGCAAGAGGAAGAGAATGAAGCTCCAAGAGGAAGAGGAGGAGGAGGAGGAAGAAGACAAAAAGAAGAAGAGAAAGACCAAGGACAAGCAAGAAGAAAGATCCAACGAAGAAGAGGAAGCACCGCAGGAAGACGCCAAGCCCATTGGCGAACCGATTAAGTTTTCCGGAAAGGGGAGAGGCCGGAAAAAGCATTACGAATCCTTCGAGTACGATGGAAACCAATACACGCTGGAGGACCCTATACTTCTAACGCCTGAGGACAAAGACCAAAAGCCGTATGTGGCAATTATTAAGGACATTACCCAATCCCTAAATGGCAGCATGATGGTCTCAGGGCAGTGGTTTTATCGTCCTGAAGAAGCTGAAAGGAAAGGTGGTGGCAGTTGGCAATCACGTGATACAAGGGAGCTGTTTTATAGTTTCCACCGTGATGATGTTCCTGCAGAATCTGTTATGCATAAGTGTGTGGTGCATTTTGTTCCCATTAACAAACAACTTCCAAATCGTAAGCAGCATCCTGGGTTTATTGTGCAAAAGGTATATGACACAGTAGAAAGGAAACTCTGGAAGCTAACTGATAAGGATTATGAGGATAATAAACAGCAAGAAATTGATGAGCTTGTTCAGAAAACTCTTCAACGATTGGGTGAACTACTTGATATTGAGCCTGAAGAACCTGTTGCTGATCAGGAAGATCTGATGAAAAATAAAAGAATCTTAAGGAAAAAGAGCATTTCACCTCTTGACGTTTCTAAGGAGGAGGAAACAACTCATAAGGGTGACCAGCCTATGAAACCTGAAACACCAGGAAGTTGTGTGAACACTGGCTCAGAACATTATCGTATTTTAGTGGATTTCAATGCTCTAACTGGAGATACCCATCGTGACAAATGCTTGGAGAAGTTGCTTCAAAGTGTTCAATTCATGTTTAATTCTGATGATAGCACAAAGAAGGAAGACAATGGAAATTCTGATGCAATTAACAATGGAAGCAATAACAGAAGTTTAGAATTAGCAAATGAGTGTAAAGACAAGGTTCAACAGAGTTCCAAATCTTTTGTCTGGCCAGATATTGCTGTTCCAGCAGTAGTTGCTCTGGAAAAAGCTTCACATGATACCTTCTCATTAGATTATCAAAAGTATAATCAAAAGCTACGACAGTTAGTATTTAATCTCAAGAACAATGCAATCCTAGCATGCCGTCTATTAAATGGAGAGTTGGAACCTTCCAAAATATTGAATATGACACCCAATGAATTGAAGGAGGGTTTGACTGCGGAGGAAACAACCAAGAAGGAGCCTGATGAGTCACAACACATGCAGATGACGGGTGCCCGATGCAGTAGATGCATGGAGTGTAAGGTGGGCTTGAGGGATATTATCCATGCTGGACATGGTGATCGATATCAGTTGGAATGTACTGCCTGTGGTCATTTCTGGTTTGCCTCCCGTGATGAGGTGTCTGAACTGACTTTAGATGCATCAGATTCAAAAAGAAGTGTAGGCACAGCGCCATGGGCCACTGCAAAATTTGAGCATGTTGAGAAGAAGCTGGTGAGTCCCCGCGAATCTGAAAAGAATGACATCTTTAAGAAAACAAGTGAAGCTTATATGCCAGTTTTGGATACCCAGAAATCATTTGGCAAATCTAGGAAAGATGAAAACGTACAAGCTTCAAAACACCCTGATTAGTGACTAAGAGGAATATTTATCCTGTGCTGTACTTATAGATTTTGTTTTGGTACCGATAGTAGCAAAAGCTCGTATATAGTTCGCATACAATGTAGCCGTTGGTTTTCTGTATAGCTCTAACGGAATATTTTATGTAAACAGTTAGAATGGCTGTTGCCGTGTTGGGTGTGATAGTCTTTTAGGTTCAGGCCGTTACTTTCTATCAAGTATCTTCAGTCTGAAATAGTACACGAGAAAAAAACTAATTGAATGAATTATTTAGATATGTATTTTTTTTATAACTTTACACATTTTATATTAAAATTAAGTAA 2322 0.4096 MGNRRFTQVATSDEEDEAPPPPPPPKQQSSASASEENRPKKQRKRKRMKLQEEEEEEEEEDKKKKRKTKDKQEERSNEEEEAPQEDAKPIGEPIKFSGKGRGRKKHYESFEYDGNQYTLEDPILLTPEDKDQKPYVAIIKDITQSLNGSMMVSGQWFYRPEEAERKGGGSWQSRDTRELFYSFHRDDVPAESVMHKCVVHFVPINKQLPNRKQHPGFIVQKVYDTVERKLWKLTDKDYEDNKQQEIDELVQKTLQRLGELLDIEPEEPVADQEDLMKNKRILRKKSISPLDVSKEEETTHKGDQPMKPETPGSCVNTGSEHYRILVDFNALTGDTHRDKCLEKLLQSVQFMFNSDDSTKKEDNGNSDAINNGSNNRSLELANECKDKVQQSSKSFVWPDIAVPAVVALEKASHDTFSLDYQKYNQKLRQLVFNLKNNAILACRLLNGELEPSKILNMTPNELKEGLTAEETTKKEPDESQHMQMTGARCSRCMECKVGLRDIIHAGHGDRYQLECTACGHFWFASRDEVSELTLDASDSKRSVGTAPWATAKFEHVEKKLVSPRESEKNDIFKKTSEAYMPVLDTQKSFGKSRKDENVQASKHPD 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01070 605 ProSiteProfiles TFIIS central domain profile. 336 490 IPR003618 GO:0006351
Pste3g01070 605 MobiDBLite consensus disorder prediction 584 605 - -
Pste3g01070 605 SMART mid_6 367 472 IPR003618 GO:0006351
Pste3g01070 605 MobiDBLite consensus disorder prediction 287 304 - -
Pste3g01070 605 Gene3D - 319 464 IPR036575 GO:0006351
Pste3g01070 605 MobiDBLite consensus disorder prediction 1 103 - -
Pste3g01070 605 MobiDBLite consensus disorder prediction 59 88 - -
Pste3g01070 605 Coils Coil 40 82 - -
Pste3g01070 605 ProSiteProfiles BAH domain profile. 115 234 IPR001025 GO:0003682
Pste3g01070 605 Gene3D - 25 223 IPR043151 -
Pste3g01070 605 SMART BAH_4 115 234 IPR001025 GO:0003682
Pste3g01070 605 MobiDBLite consensus disorder prediction 588 605 - -
Pste3g01070 605 MobiDBLite consensus disorder prediction 355 375 - -
Pste3g01070 605 MobiDBLite consensus disorder prediction 287 315 - -
Pste3g01070 605 CDD BAH_plant_3 97 243 - -
Pste3g01070 605 SUPERFAMILY Elongation factor TFIIS domain 2 331 463 IPR036575 GO:0006351
Pste3g01070 605 Pfam Transcription factor S-II (TFIIS), central domain 332 481 IPR003618 GO:0006351
Pste3g01070 605 PANTHER BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 1 599 - -
Pste3g01070 605 Pfam BAH domain 116 232 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01070 Pste-Chr3 6898129 6904378 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01070 3 6898129 6904378 Pste3g01070 3 6898129 6904378 ECH