Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01051 CTCACTATATTAAAAGTTTTACACAAACTAAAGCCTGATTTGTTTGTTTGTCGTGCAAAAGTAAGTAAAAATGTGGTTTCTTGGTTGGAAAGGGCCATCAGGGTTCTCAGCCTCTTCTACTGCCGAACAAGTCACTCAAGGGATTGATGGAACCGCCCTCACCGCCGTCGTAACGGGAGCATCAAGTGGTCTTGGTCTGGAGACCACCCGGGTTCTTGCATTGCGCGGTGTCCATGTTGTCATGGCAGTAAGGAATGTGGACAGTGGTAAGAAAGTCAAAGAAACAATACTTAAGGAAATTCCCTCGGCTAAAATTGATGTTATGGGGTTAGACTTGAGCTCTATTGCATCTGTAAGGAAATTTGCAGCAGCTTTTAGTTCATCTGGTCTTCCACTCAACATCCTAATTAACAATGCAGGGGTTATGGCAACTCCATTCACGCTCTCCCAAGATAATATTGAATTGCAGTTCGCAACCAATCATTTAGGTCATTTTCTCTTGACAAACCTTTTATTGGAAACTATGAAAAAAACAGTACGAGAGTGCAATCGGGAAGGAAGAATTGTTATTCTATCATCAGAGGCACACAGATTTGCATATAGTGAAGGGATTCGATTTGATAAGATCAATGATGAATCAGGGTACAGCAGTTATTTTGCTTATGGACAATCAAAGCTTGCTAATATCTTACATGCAAATGAGCTTTCAAGGCGCTTGAAGGAAGAAGGAGTGGAAATAACCGTCAACTCCCTTCATCCTGGATCAATTATTACAAATATTCTGCGATACCATGATTATATTAATGTCCTTGCTAATATGGTGGGCAAGTACTTCCTTAAGAATGTGCAACAGGGAGCTGCAACTCAATGTTATGTGGCATTGCATCCACAAGTCAAGGGAATATCTGGTGAATACTTTATGGATAGCAATAAGGCAAACCCAACCTCTCTGGCTAAAGATTCAGAACTGGCGAAAAAATTATGGGAATTCAGCTTAAACCTGACAGACTAATCCAAAGTAGCTTAGAGGTTTGGCTTGAGGAAGCTTCATACAGCTCAGACTATCAATTACTGTTTTGAGATCTTTATTGTTGAAAATCAAGCAGTATATATAATTAATTCAAACATGACCCATCACAGTACTCCATTGCATTGATATGGAAATCGTTAACAGAAATTGTATTAGTGTAATTGCTACATAATATTACCACATTGCGACCATGCCTTTTTATGTGTGTATACTAGACTCGGCAAATATTACCACAAAGTAGACAATGAGAAGAAAATGTTGCCTTTATTGATTGGCAAG 1309 0.3927 MWFLGWKGPSGFSASSTAEQVTQGIDGTALTAVVTGASSGLGLETTRVLALRGVHVVMAVRNVDSGKKVKETILKEIPSAKIDVMGLDLSSIASVRKFAAAFSSSGLPLNILINNAGVMATPFTLSQDNIELQFATNHLGHFLLTNLLLETMKKTVRECNREGRIVILSSEAHRFAYSEGIRFDKINDESGYSSYFAYGQSKLANILHANELSRRLKEEGVEITVNSLHPGSIITNILRYHDYINVLANMVGKYFLKNVQQGAATQCYVALHPQVKGISGEYFMDSNKANPTSLAKDSELAKKLWEFSLNLTD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01051 313 PRINTS Glucose/ribitol dehydrogenase family signature 31 48 IPR002347 -
Pste3g01051 313 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Pste3g01051 313 PRINTS Glucose/ribitol dehydrogenase family signature 107 118 IPR002347 -
Pste3g01051 313 PRINTS Glucose/ribitol dehydrogenase family signature 157 173 IPR002347 -
Pste3g01051 313 Pfam short chain dehydrogenase 31 177 IPR002347 -
Pste3g01051 313 PANTHER RETINOL DEHYDROGENASE 9 312 - -
Pste3g01051 313 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 287 IPR036291 -
Pste3g01051 313 CDD retinol-DH_like_SDR_c_like 31 305 - -
Pste3g01051 313 Gene3D - 25 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01051 Pste-Chr3 6777475 6780385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01051 33 291 Acyl Lipid Metabolism Gene Families AT3G55290 29.779 4.45e-10 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01051 3 6777475 6780385 Pste3g01051 3 6777475 6780385 ECH