Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01018 AGTTCAGAAGCGATCCAAAGTTATGGCAAAAGTGAAGGTCCCCACAATCACAAGTGAGGTCAAACTAGGGACAACGAAGACACAACGACACAAGAATAGAGGAAGCTATGGAGGAAACAGGGCTTCGCTAGAATCAAAAGCTATGGTGGAAATAGGACTTCGTCAGAATCGGAAGCTATGGCGGAAAGCTGAAAGCAAAGGTGAGGTTGTAATCACAAGGTTCACACTTGCAAGGACCAACTTCGAGGTCGACCTCGGAAGGTTCTATGAGAGAAAGGGTAGGAACGAAAGGACAAGAATTAGAGTGAAAAAGGAGGACGACCCCCATTCAAAAAGCTCAAGGCCTCCACAGGAAGATCCCCAAAAAGGATTCGTCGACGATGCCTATACATATGGCGGCGATGATGCATACGACGATGACGAAGGGAAAACCAAGGATTTTAGCAAATTAGAGCTGAAACCGGATCACGGCAATCGCCCTCTGTGGGCGTGTGGCAATGGGCGCATATTCCTGGAGACTTTCTCGCCTTTGTACAAGCAAGCTTATGATTTTCTTATCGCCATCGCGGAGCCTGTTTGCAGGCCCGAGTCCATGCACGAATACAACCTTACTCCCCACTCCCTCTATGCGGCTGTTTCTGTTGGTCTGGAAACAGAAACAATCGTTGCTGTTTTGAACAAGTTATCCAAGACCAAGCTTCCCAAAGAGATGATTAAGTTTATACATGATTCTACTGCAAATTATGGCAAAGTCAAACTCGTGCTCAAGAAGAATCACTACTTCATTGAATCTCCATTTCCAGAGGTGTTGAAGACATTGCTCAGAGACGAAACTATATCTAGAGCGAGGATTATTTCTGAGAATGTAAATGGAGATGGGTTTACAATCAGCAAAGCAGCAGGTGAAATTGAAGGCACTCATGATGAGTTGCTACATGAAGCAGAAGTGGCAGCGGTTGCAGAAGAGAAAGAAGCCCATTCATTTGAAATTGATCCTTCTCAGGTTGAAAATGTAAAGCAACGTTGCTTGCCAAATGCTTTAAATTATCCCATGTTGGAGGAGTATGACTTCAGAAATGATACTGTGAACCCAGACCTTGACATGGAACTAAAGCCTCAAGCACAACCACGGCCATATCAAGAGAAGAGCCTTAGTAAAATGTTTGGAAATGGAAGAGCAAGATCTGGTATAATAGTTCTACCCTGTGGTGCTGGAAAGTCCCTAGTTGGTGTTTCTGCAGCTTGCCGGATTAAAAAAAGCTGCCTCTGTTTGGCGACAAATGCTGTTTCTGTAGATCAGTGGGCTTTTCAATTTAAACTATGGTCAACTATTCGAGAAGAACAAATATGCCGTTTCACGTCTGATAGCAAAGAGAGATTCCGTGGTAATGCTGGAGTTGTTGTGACAACATATAATATGGTTGCTTTTGGCGGTAAACGGTCTGAAGAATCTGAAAAGATCATTGAAGAAATAAGAAACAGAGAATGGGGATTGCTCCTCATGGATGAGGTGCATGTGGTTCCTGCCCATATGTTTCGAAAAGTCATTAGTATTACTAAATCTCATTGTAAACTCGGGCTCACAGCTACACTTGTCAGAGAGGACGAAAGGATTACAGATCTGAACTTCCTGATTGGTCCCAAGCTGTATGAGGCAAATTGGCTAGATCTAGTAAAAGGTGGATTTATTGCAAATGTACAGTGTGCTGAAGTATGGTGTCCAATGACAAAAGAGTTTTTTGCTGAGTATTTGAAGAAAGAGAACTCCAAGAAGAGGCAGGCTCTTTATGTGATGAATCCTAATAAGTTCAGAGCGTGTGAATTTCTTATAAATTTCCATGAAAGAGAACGTGGTGATAAAATTATAGTCTTTGCTGATAATCTTTTTGCCCTCACTGAGTATGCCATGAAGCTTCGCAAACCAATGATATATGGTGCTACAAGCCATGTTGAGAGGACAAAAATTTTACAAGCATTCAAAACTAGCAAAGATGTAAATACTATATTTCTTTCCAAGGTGGGTGACAACTCAATTGATATTCCTGAAGCAAATGTGATAATTCAGATCTCTTCACATGCTGGTTCAAGGCGACAAGAAGCCCAGCGTCTGGGTCGTATTCTTAGGGCAAAGGGAAAGCTCCAGGACAGGATGGCAGGGGGCAAGGAGGAGTATAATGCATTTTTTTATTCCCTTGTCTCAACCGATACCCAGGTATACATTGATTCTATGCCAAGTCATTTATTCATTCATCAGGTCATGCGTTCAATGAAAAATACAGGATACGAGATGTATTACTCAACTAAGAGGCAGCAATTTTTAATTGATCAGGGTTACAGCTTTAAGGTGATTACTAGCTTGCCTCCTGCTGATCAAGGACCTAGTTTGAGCTACTATCATCTGGAGGATCAATTGGCACTTCTTGGAAAGGTGTTGAGTGCTGGTGATGATGCTGTTGGATTAGAGCAACTAGAAGAAGATGCAGATGAAATAGCTCTTCATAATGCCCGTCGTTCTCAAGGATCCATGAGTGCAATGTCAGGTGCAAAAGGGATGGTTTATATGGAATATAGTACTGGGCGTAGCAAAGGCCAAGGACAGATCAAGAGCAAACCGAAAGATCCATCGAAGAGACATTTCTTATTTAAAAGAAGATATGGCGCAACCTAAAATGGTGTACCTGGCTGGGAATAGTAACGAGCGAGCACCTATAATGTGTTATCAGACGAAAGTGATCGAGTCTATGCAGGATTTGCAGCCTTACTTGACATAATGCTGCTGATGGCCTCTTTTTAAGAAAAAAGACTAATATACATACAGATCATTTGATGTTTCGACAATGCTAGCCTAATGCTTACAAGAGAAGTAGGTGCTTGCAACACCATTTCACCATGAAAATGACAAAATTTAGAAAGAAATATTAAATGAAATGTGAAAGTCCTTAAAATTGGGCTGATTGACCTAAGTGGGTTTATTTTTTAAAAAAATTATCAATATGGG 2998 0.4163 MAKVKVPTITSEVKLGTTKTQRHKNRGSYGGNRASLESKAMVEIGLRQNRKLWRKAESKGEVVITRFTLARTNFEVDLGRFYERKGRNERTRIRVKKEDDPHSKSSRPPQEDPQKGFVDDAYTYGGDDAYDDDEGKTKDFSKLELKPDHGNRPLWACGNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIVAVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNHYFIESPFPEVLKTLLRDETISRARIISENVNGDGFTISKAAGEIEGTHDELLHEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLINFHERERGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQVYIDSMPSHLFIHQVMRSMKNTGYEMYYSTKRQQFLIDQGYSFKVITSLPPADQGPSLSYYHLEDQLALLGKVLSAGDDAVGLEQLEEDADEIALHNARRSQGSMSAMSGAKGMVYMEYSTGRSKGQGQIKSKPKDPSKRHFLFKRRYGAT 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01018 881 Gene3D - 551 815 IPR027417 -
Pste3g01018 881 PRINTS Xeroderma pigmentosum group B protein signature 592 607 - -
Pste3g01018 881 PRINTS Xeroderma pigmentosum group B protein signature 554 576 - -
Pste3g01018 881 PRINTS Xeroderma pigmentosum group B protein signature 488 508 - -
Pste3g01018 881 PRINTS Xeroderma pigmentosum group B protein signature 152 172 - -
Pste3g01018 881 PRINTS Xeroderma pigmentosum group B protein signature 659 677 - -
Pste3g01018 881 PRINTS Xeroderma pigmentosum group B protein signature 612 634 - -
Pste3g01018 881 PRINTS Xeroderma pigmentosum group B protein signature 238 257 - -
Pste3g01018 881 PRINTS Xeroderma pigmentosum group B protein signature 715 738 - -
Pste3g01018 881 PRINTS Xeroderma pigmentosum group B protein signature 381 403 - -
Pste3g01018 881 PRINTS Xeroderma pigmentosum group B protein signature 678 703 - -
Pste3g01018 881 PRINTS Xeroderma pigmentosum group B protein signature 350 376 - -
Pste3g01018 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 478 729 IPR027417 -
Pste3g01018 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 328 544 IPR027417 -
Pste3g01018 881 PANTHER RAD25/XP-B DNA REPAIR HELICASE 143 849 - -
Pste3g01018 881 FunFam Putative DNA repair helicase rad25 551 750 - -
Pste3g01018 881 MobiDBLite consensus disorder prediction 1 32 - -
Pste3g01018 881 Gene3D - 359 550 IPR027417 -
Pste3g01018 881 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 380 542 IPR014001 -
Pste3g01018 881 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 597 744 IPR001650 -
Pste3g01018 881 Pfam Helicase conserved C-terminal domain 154 277 IPR032830 -
Pste3g01018 881 SMART helicmild6 625 703 IPR001650 -
Pste3g01018 881 FunFam Probable DNA repair helicase RAD25 359 550 - -
Pste3g01018 881 NCBIfam DNA repair helicase rad25 139 735 IPR001161 GO:0003678|GO:0006289|GO:0006367
Pste3g01018 881 MobiDBLite consensus disorder prediction 92 109 - -
Pste3g01018 881 MobiDBLite consensus disorder prediction 11 32 - -
Pste3g01018 881 MobiDBLite consensus disorder prediction 92 119 - -
Pste3g01018 881 SMART ultradead3 365 546 IPR014001 -
Pste3g01018 881 Pfam Type III restriction enzyme, res subunit 368 524 IPR006935 GO:0003677|GO:0005524|GO:0016787
Pste3g01018 881 Pfam ERCC3/RAD25/XPB C-terminal helicase 550 822 IPR032438 -
Pste3g01018 881 CDD SF2_C_XPB 561 725 - -
Pste3g01018 881 MobiDBLite consensus disorder prediction 852 881 - -
Pste3g01018 881 CDD DEXHc_XPB 361 530 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01018 3 6458175 6473323 Pste3g01018 3 6458175 6473323 ECH