Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00969 ATGTATTGTAGCTGTGTTGTGCTGTTGGTTTTTCCTGTCCAGATGTTTTATGAAGATCCAGTAAAGGATATTGATATTGAGAAGCAAACTTTGACAACAATTTCTGGAAAACTTCTGAAGTATGGTTCGCTTATTATTGCAACAGGGTGTACGGCATCAAGGTTTCCGGAGAAAATTGGGGGAAACCTACCTGGTGTGCACTATATCCGGGATGTTGCAGATGCTGATGCACTGATTTTATCATTAGAAAAAGCGAAAAAGGTTGTAGTTGTTGGAGGTGGTTATATAGGAATGGAGGTTGCTGCTGCTGCTGCTGGTTGGAAACTTGATACAACAATCATATTCCCCGAAGACCACTTTTTGCAAAGACTGTTTACTCCTTCCCTTGCCCGGAGATATGAAGAACTCTATCAAAAGAATGGAGTCAAAACCTTGAAGGGTGCCTCCATAAAAAATTTGGAAGCTGGTTCTAATGGACATGTAGCTGCTGTGAAACTTGGAGATGGATCTATTGTGGAAGCAGATACGGTAATTATAGGCATTGGAGCAAAACCTGCTGTGAGCCCTTTTGAGAGGGTGGGCCTGAATACAGATGTTGGTGGTATACAGGTTGATGGGATGTTCCGGACAAGCATTCCTGGGATCTTTGCTGTTGGTGATGTAGCAGCTTTCCCTTTAAAGATCTATAACCGTGTCACTCGAGTGGAACATGTAGATCATGCTCGTCGCTCTGCTCAGCACTGTGTGAAAGCATTACTCAGTGCACAAACTCACATGTACGACTATCTTCCATACTTCTACTCGAGGGTTTTTGAATATGAAGGGAGCCCTAGGAAAGTATGGTGGCAGTTCTTTGGAGACAATGTTGGAGAAACAGTTGAAATTGGAAATTTTGATCCTAAGATAGCTACTTTCTGGATTGACTCTGGTAAGCTGAAGGGAGTTCTTCTCGAAAGCGGGAGCCCTGAGGAATTTCAACTCCTGTCTAAACTTGCCAGAAGTCAGCCTCTGATTGATAAAGCTAAACTTCAAAAGGCAACTTCAGTGGAGGAGGCCCTAGAGATTGCTCGGGGATCCTTGCAAGCCTCTGTCTAGTACACATCCTGTAATTTATCTTCTTTTACGACATCACCATCCGTATCCGTGACTATCTGTCATCATCTGAGTTCCCTTTGAGAGAGAATAATTTTTATTATATTCTCAGCCACATGGTATCATTAATGCTTTTAAACTCTGGAAGAATGTCTAATTTGGATTTGATCTAGCGCCATACGGCGTCATCAATAATTTAAGATAGCCTTTGCCTTTACACGTTATATTCATTGTCCAGGAATGTCATTTTTGTTCTCAACTTACTACCGACAACTCTTCTTCTATTTTAGGGCGACCCATAGGATATCCTGTCCTCGGGAAGAGTATCATATTTTCTCGTGTTATTTTGTGACTTGGAATATAGGATCTGATAAGC 1468 0.4183 MYCSCVVLLVFPVQMFYEDPVKDIDIEKQTLTTISGKLLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRDVADADALILSLEKAKKVVVVGGGYIGMEVAAAAAGWKLDTTIIFPEDHFLQRLFTPSLARRYEELYQKNGVKTLKGASIKNLEAGSNGHVAAVKLGDGSIVEADTVIIGIGAKPAVSPFERVGLNTDVGGIQVDGMFRTSIPGIFAVGDVAAFPLKIYNRVTRVEHVDHARRSAQHCVKALLSAQTHMYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEIGNFDPKIATFWIDSGKLKGVLLESGSPEEFQLLSKLARSQPLIDKAKLQKATSVEEALEIARGSLQASV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00969 364 PRINTS Pyridine nucleotide disulphide reductase class-II signature 210 228 - -
Pste3g00969 364 PRINTS Pyridine nucleotide disulphide reductase class-II signature 83 107 - -
Pste3g00969 364 PRINTS Pyridine nucleotide disulphide reductase class-II signature 42 50 - -
Pste3g00969 364 SUPERFAMILY FAD/NAD(P)-binding domain 16 252 IPR036188 -
Pste3g00969 364 Gene3D - 55 182 IPR036188 -
Pste3g00969 364 Gene3D - 265 352 IPR016156 GO:0016491|GO:0050660
Pste3g00969 364 Gene3D - 13 248 IPR036188 -
Pste3g00969 364 PRINTS FAD-dependent pyridine nucleotide reductase signature 41 59 - -
Pste3g00969 364 PRINTS FAD-dependent pyridine nucleotide reductase signature 200 222 - -
Pste3g00969 364 PRINTS FAD-dependent pyridine nucleotide reductase signature 87 105 - -
Pste3g00969 364 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 190 - -
Pste3g00969 364 Pfam Pyridine nucleotide-disulphide oxidoreductase 13 245 IPR023753 GO:0016491
Pste3g00969 364 PANTHER APOPTOSIS-INDUCING FACTOR 1 13 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00969 Pste-Chr3 6099976 6104631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00969 30 264 Acyl Lipid Metabolism Gene Families AT1G48030 27.092 1.11e-13 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00969 3 6099976 6104631 Pste3g00969 3 6099976 6104631 ECH