Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00839 TGTCAATTTCTGGGTTCTTGATGCCTTCCTTTTTCCCTCCCCTCCACAGTATATAGAGCCTCGAGCTCCTCAGTTTCCAATCCCCGTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCCTCCTAATTTCCTGCTAACAGTCATCCACATTGCCATTTCCCGTTCCAGTGACCACATGGACAAGCTTGTTTGCATGCTTCTTGTTCTTCTTGTGTGCCCTCCTTTTGCCTTTGGTGGCCATGACTATGCCCAAGCTCTGACCAAGAGCATTCTCTTCTTTGAAGCTCAGAGATCTGGGTACCTTCCCCACAACCAGAGAGTAACATGGAGAGCACATTCTGGCTTGCAAGATGGGAAAGCAAGCGGAGTGGATCTAGTTGGTGGGTACTATGATGCAGGGGACAATGTGAAGTTCGGGTTACCCATGGCGTTTACAGTCACAATGATGTCGTGGAGCATAATTGAATACGGTAAACAAATGGCGGCTAGCGGTGAGTTTGGACACGCCATGGAAGCCGTTAGGTGGGGTACGGACTACTTTATCAAAGCACATCCTCACCCCAATGTTCTGTATGCAGAGGTGGGAGACGGGAACACTGACCATTACTGTTGGCAAAGGCCAGAGGATATGACAACTGACCGTCATGCTTACAAGATCGATTCCAGCAATCCCGGTTCGGATCTCGCCGGAGAAACCGCCGCCGCTATGGCCGCCGCATCCATTGTTTTCCGACGCTCTGACCCAGCCTATGCCGCCCAACTCCTCCGCCATGCCTACCAGTTATTTGATTTTGCTGACAAATACAGAGGCAAATATGACAGCAGCGTTACTGTTGCCCAGAAATATTACAGATCCATCAGTGGCTACAATGATGAATTGCTCTGGGCTGCTGCTTGGTTGTATCAAGCATCTAACAATCAGTATTACTTAGATTACCTCGGAAGAAATGGTGATTCAATGGGTGGAACTGGCTGGGAAATGACTGAATTTGGCTGGGATGTCAAGTATGCTGGGGTTCAGACATTAGTTGCCAAGTTCCTAATGCAGGGCAAAGCTGGCCATCATGCTCCAGTTTTTGAGAGATATCAGCAGAAGGCTGAATCTTTCATGTGTTCTTGCCTTGGAAAGGGTAATACCAATGTTCAGAAAACTCCTGGCGGTCTCATCTTCCGCCAGAGATGGAATAACATGCAGTTTGTCACAAGTGCCTCATTTCTAGCCACTGTATACTCTGATTACCTTGCTTCTTCTGGTAAAAACTTGAGATGCAATTCAGGCAATGTGGACTACCTTCTTGGGGACAACCCAAGAGCCACCAGTTACATGGTGGGCTATGGAAGCAACTTTCCACAAAGAGTTCATCACCGTGGTTCGTCCATTGTTTCTATCAAGGTTAACCCTTCATTTGTCAGCTGCCGTGGAGGTTATGCTACATGGTTTAGCAGCAAAAGGAGCGATCCCAACCTACTCACTGGTGCTGTTGTTGGTGGACCTGATGCATATGACGACTTTGCTGATGAAAGAGACAATTATGAGCAAACAGAGCCAGCAACCTATAACAATGCTCCTCTCCTTGGTATTCTAGCACGACTAAGTGGAGGTCATGGGGGTTATAACCAGCTTCTTCCAGTTGTTGTTCCAGCTCCTAAGCCTGTTGTTACCAAGCCTCAACCGTCCCCTAATCCTAAGGCAATTCCATCTCCAGCTTCATGGTCAGCCCCAATTTCCATTGAGCAGAAAATGACTAAATCATGGGTTGCCAACAGCAAAACTTATTACAGATACTCAACGGTGGTGACTAACAAATCCAACAAGAGTCTCAATTCTCTCAATCTTTCAATATCCAAGCTCTACGGTCCAATCTGGGGTCTCACAAAGTCTGGTGATTCTTACACATTCCCATCATGGCTCAGCTCATTATCAGCAGGCAAAAGCCTTGAATTTGTCTACATCCATTCTGCTTCTCCAGCAGATGTCTCCGTGGCTAACTACGTGTTAGCCTGAGAGTGACACGAGAACGGTTTACTGCTTTCTTGTTTAAGACTGTGTAGCAATACAAATGTGCAGTGAGGAGAGTCTTTACGTTTTTCCTTCAATATTTTGGTGTCAAATCTTCTTTTGTGTATTTTGCATTTCAGTAGGTTAGATAAAAATAGGTAGATTATATAAGACGGAAGGACCGGAGCAGAAAGGAGTGAAGAGACAAAAGGCAGAGCTCATCCTCTTCTTCTCCGCTTTACAACTTATATACAGTGAGTGATACAAGACAGACAGAGTGAAACAGGGTTGTTGAGAAGTTTTTAAAAATGAACATCTCAATATTTCAGAGAAGAGTCATCACTTGTATTTTTTAAAGCTTTCGATGTCTTTTCTGTGTTTGATGTTGTAACCTTTGCAGCATTTTGTACTCTCGACAGAGAACAGTTTGTGCTATATTGTATTATGTCCTTGTGCTGTGCAATGCTTGTTTTGTATATTTGGCTATTTCGACTTTCCAGTTTATGGCTACAAGTTGAATGGTTGAGAACTTTCCGGTCTGTGGTATATCTGAGGTTAACGAAGATGGTGTTG 2576 0.4515 MDKLVCMLLVLLVCPPFAFGGHDYAQALTKSILFFEAQRSGYLPHNQRVTWRAHSGLQDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYGKQMAASGEFGHAMEAVRWGTDYFIKAHPHPNVLYAEVGDGNTDHYCWQRPEDMTTDRHAYKIDSSNPGSDLAGETAAAMAAASIVFRRSDPAYAAQLLRHAYQLFDFADKYRGKYDSSVTVAQKYYRSISGYNDELLWAAAWLYQASNNQYYLDYLGRNGDSMGGTGWEMTEFGWDVKYAGVQTLVAKFLMQGKAGHHAPVFERYQQKAESFMCSCLGKGNTNVQKTPGGLIFRQRWNNMQFVTSASFLATVYSDYLASSGKNLRCNSGNVDYLLGDNPRATSYMVGYGSNFPQRVHHRGSSIVSIKVNPSFVSCRGGYATWFSSKRSDPNLLTGAVVGGPDAYDDFADERDNYEQTEPATYNNAPLLGILARLSGGHGGYNQLLPVVVPAPKPVVTKPQPSPNPKAIPSPASWSAPISIEQKMTKSWVANSKTYYRYSTVVTNKSNKSLNSLNLSISKLYGPIWGLTKSGDSYTFPSWLSSLSAGKSLEFVYIHSASPADVSVANYVLA 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00839 609 Pfam Carbohydrate binding domain CBM49 517 594 IPR019028 GO:0030246
Pste3g00839 609 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 372 398 IPR018221 -
Pste3g00839 609 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 446 464 IPR033126 -
Pste3g00839 609 FunFam Endoglucanase 20 478 - -
Pste3g00839 609 Gene3D - 21 476 IPR012341 GO:0005975
Pste3g00839 609 Pfam Glycosyl hydrolase family 9 24 470 IPR001701 GO:0004553|GO:0005975
Pste3g00839 609 SMART CBM49_2 517 597 IPR019028 GO:0030246
Pste3g00839 609 PANTHER ENDO-1,4-BETA-GLUCANASE 7 474 - -
Pste3g00839 609 SUPERFAMILY Six-hairpin glycosidases 20 486 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00839 Pste-Chr3 5195443 5200790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00839 14 609 Glycoside Hydrolase AT1G64390 77.011 0.0 984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00839 3 5195443 5200790 Pste3g00839 3 5195443 5200790 ECH