Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00809 TACCTTATCATTTTCCTCCCTTCTCTCTATCGCCAAACGCCAAACGCCAAACGCCAAACGCTACGTACCACTATGCCCACCCAAACCATTATGGTTACCGGTGGAGCCGGTTACATCGGTAGCCACACCGTCCTTCAGCTTCTCCTCGGCGGTTATCACGTCGTCGCCGTTGACAACTTTGACAATTCTTCCGAAACCGCCATCCTCAGAGTCAAGGAACTTGCCGGAGAATTCGCAAAAAACTTTTCCTTTTCCATGTTAGACTTGCGGGACAAATGTGCCCTCGATAAAATTTTTTCAACCACAAGGTTTGATGCTGTCATACATTTTGCTGGTCTTAAGGCAGTGGGTGAAAGTGTGGAGAAACCACTGCTCTACTTTGACAACAACCTGATTGGGACAATCATTCTATTTGAAGTCATGGCTGCCCACGGATGCAAGAATCTTGTGTTCTCATCTTCAGCAACTGTATATGGCTGGCCAAAGGAGGTTCCATGTACTGAAGAGTTCCCTCTGTCAGCAGCAAACCCATATGGTCGAACCAAGCTTATGATCGAAGAAATTTGCCGCGATGTCCACAGTGCAGATTCAGATTGGAAAATTATACTGTTGAGATACTTCAACCCAGTTGGTGCACATCCTAGTGGTTATATCGGCGAGGATCCTCGTGGAATTCCAAACAATCTCATGCCCTTTGTTCAACAAGTAGCAGTTGGCAGGCGCCCTGCTTTGACAGTTTATGGAAACGATTATAAAACAAGTGATGGCACCGGAGTTCGTGATTACATTCATGTTGTTGATTTAGCAGACGGGCATATTGCTGCATTGCGTAAACTTCAAGATCCTAAAATAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTCAAGGCTTTCGAACAGGCCTCTGGAAAGAAAATTCCACTTGCAATGGCTGGTCGGAGACCTGGAGATGCTGCAATTGTTTATGCATCAACAGATAAAGCCGAAAGAGTACTTAATTGGAAGGCCAAATATGGCATCGGTGAAATGTGCCGTGATCAATGGAATTGGGCCAGCAAAAACCCTTATGGCTACAGTGGATCTAAAGATTCCTCCAATTGATGTTGATGATTGTTGGATATAGTATCAGTATATATGTTCTCTTTTGGGGGTCTTTCTCAACCCAGTCACACAATAGGTCACTAAAGTTTTTGTTTAGCGATTCTAAGGTGGAAAATCCTTTCCTAATTATGAATTCTATTAATGTGGTAAATAAGTAGTGGTTTAGTTTACTTTAATGATTCTTTAGGCTCCAGCGCACAGGTCATTGGATGAGCATTCTCTCATGTTCTTCAAGAACATGACCGTATCCTGTTTTGTAAATCTAAACCACAAGTATGACTGACAGGTATAATCTTCTTACATTACCTCAATTCATAATAAAGTTTACTTAGCATTATATGTCAA 1470 0.4259 MPTQTIMVTGGAGYIGSHTVLQLLLGGYHVVAVDNFDNSSETAILRVKELAGEFAKNFSFSMLDLRDKCALDKIFSTTRFDAVIHFAGLKAVGESVEKPLLYFDNNLIGTIILFEVMAAHGCKNLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLMIEEICRDVHSADSDWKIILLRYFNPVGAHPSGYIGEDPRGIPNNLMPFVQQVAVGRRPALTVYGNDYKTSDGTGVRDYIHVVDLADGHIAALRKLQDPKIGCEVYNLGTGKGTSVLEMVKAFEQASGKKIPLAMAGRRPGDAAIVYASTDKAERVLNWKAKYGIGEMCRDQWNWASKNPYGYSGSKDSSN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00809 350 Gene3D - 6 275 - -
Pste3g00809 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 342 IPR036291 -
Pste3g00809 350 PANTHER UDP-GLUCOSE 4-EPIMERASE 2 344 - -
Pste3g00809 350 NCBIfam UDP-glucose 4-epimerase GalE 6 340 IPR005886 GO:0003978|GO:0006012
Pste3g00809 350 CDD UDP_G4E_1_SDR_e 5 334 IPR005886 GO:0003978|GO:0006012
Pste3g00809 350 PRINTS Nucleotide sugar epimerase signature 236 251 - -
Pste3g00809 350 PRINTS Nucleotide sugar epimerase signature 262 277 - -
Pste3g00809 350 PRINTS Nucleotide sugar epimerase signature 32 48 - -
Pste3g00809 350 PRINTS Nucleotide sugar epimerase signature 301 318 - -
Pste3g00809 350 Pfam GDP-mannose 4,6 dehydratase 7 330 IPR016040 -
Pste3g00809 350 FunFam UDP-glucose 4-epimerase 4 278 346 - -
Pste3g00809 350 Gene3D - 194 335 - -
Pste3g00809 350 FunFam UDP-glucose 4-epimerase 6 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00809 Pste-Chr3 5017382 5021568 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00809 5 319 Miscellaneous Gene Families AT4G00110 27.273 3.72e-21 92.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01829 1 5628089 5629182 Pste3g00809 3 5017382 5021568 PCT