Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00795 AATATTTCTGAAATTGAAGCATTGTATGATCTGTTCAAGAAATTAAGCAGCTCCATTGTGGACGACGGGCTTATCAGCAAAGAAGAGTTTCAGCTTGGCTTATTTGGAAGCAGCCAGAAACGGAACTTCTTTGCTGACAAGGTATTTCATTTATTTGACTCAAAAAATGACGGGGTTATAGAATTTGGAGAGTTCGTTCGAGCTCTGAGCGTCTTCCACCCAGCAGCACCACAAACACAAAAAGCAGATTTTGCATTTCAGCTCTATGACATACGTCAAAGAGGCTTTATTGAACGTGGCGAGGTAAGAGAGATGGTTCTGGCACTACTAAATGAGTCGGAATTGATTCTGTCTCGCGACATAATTGAAGTCATAACTGATAAGTCCTTTCAAGAAGCAGACTCAAAAGGAGATGGAAGGATTGATAGAGAGGAGTGGCAAGAATTTGTAATACGAAATCCATCCTCATTGAGGAATATGACAATTCCCTATTTG 495 0.404 NISEIEALYDLFKKLSSSIVDDGLISKEEFQLGLFGSSQKRNFFADKVFHLFDSKNDGVIEFGEFVRALSVFHPAAPQTQKADFAFQLYDIRQRGFIERGEVREMVLALLNESELILSRDIIEVITDKSFQEADSKGDGRIDREEWQEFVIRNPSSLRNMTIPYL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00795 165 ProSiteProfiles EF-hand calcium-binding domain profile. 40 75 IPR002048 GO:0005509
Pste3g00795 165 PANTHER CALCINEURIN B 2 165 IPR045198 GO:0005509|GO:0019722|GO:0019900
Pste3g00795 165 FunFam calcineurin B-like protein 3 1 165 - -
Pste3g00795 165 SUPERFAMILY EF-hand 3 163 IPR011992 -
Pste3g00795 165 Gene3D - 1 165 - -
Pste3g00795 165 ProSiteProfiles EF-hand calcium-binding domain profile. 77 112 IPR002048 GO:0005509
Pste3g00795 165 PRINTS Recoverin family signature 141 161 - -
Pste3g00795 165 PRINTS Recoverin family signature 95 113 - -
Pste3g00795 165 PRINTS Recoverin family signature 48 69 - -
Pste3g00795 165 SMART efh_1 44 72 IPR002048 GO:0005509
Pste3g00795 165 SMART efh_1 81 109 IPR002048 GO:0005509
Pste3g00795 165 SMART efh_1 125 153 IPR002048 GO:0005509
Pste3g00795 165 Pfam EF-hand domain pair 81 150 IPR002048 GO:0005509
Pste3g00795 165 Pfam EF hand 46 67 IPR002048 GO:0005509
Pste3g00795 165 ProSiteProfiles EF-hand calcium-binding domain profile. 121 156 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00795 Pste-Chr3 4914201 4917810 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00795 1 165 EF-hand Containing Proteins AT5G24270 64.848 6.10e-79 231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00795 3 4914201 4917810 Pste3g00795 3 4914201 4917810 ECH