Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00764 ATGCAAGACCAGAGCGAGCAGATGCGAGACCAAGACCAAGACCAAGATGATGAATGTACCAAGAGCGATACCCATCAAGAAAGCGAGAAAGAGATGGCAGGCATTGCTGGTACATGTCCTTTAGGAGCATTGCTCGCAAACAAAGTTTCAGAAAGCAATGGCAATTCTGTGGTTCATTATAAGGGGCTTAGATTGCAGCACAGAATGCAAATGCCTTCACGCCAAATTTCATATTCATCGGCTCCAAGATGCAGAACAATCAAGGCCATGGCTTCTCCAACTGTTGCAGCGCCAAAGAGAGAAAAGGATCCAAAAAAGCGGGTGGTAATAACAGGAATGGGTCTTGTGTCAGTGTTTGGTAGTGACATTGATGTCTTTTACAAAAGGCTTCTTGAGGGAGAAAGTGGAATAAGCGTGATAGATAGGTTTGATGCTTCAAATTTCTCAGTCCGTTTTGGAGGTCAGATACGTGATTTCTCTTCAGAAGGCTACATTGATGGCAAGAATGACCGCCGCCTTGATGATTGCTGGAGGTATTGCATTGTTGCAGGCAAGAGGGCCCTTGATGATGCCAACCTTGGACAGCAAGTCCTCAACACTATGGACAAAACAAGAATAGGGGTTCTGGTGGGATCAGGAATGGGAGGTTTAACGGCTTTCAGCAGTGGTGTGGAAGCTCTTATACAGAAGGGATACAAGAAAATTACTCCATTTTTCATTCCCTACTCCATCACCAACATGGGTTCTGCTTTGTTGGCTATAGACACTGGTCTAATGGGTCCCAACTATTCCATTTCCACTGCTTGTGCAACTGCAAATTACTGCTTTTATGCGGCTGCTAATCACATTAGAAGAGGTGAAGCAGATATCATGGTGGTTGGTGGGACTGAGGCTGCAATCATGCCTACTGGTGTTGGAGGCTTCATTGCTTGCAGGGCCTTGTCTCAAAGGAATGAAGACCCCAAAAAGGCTTCAAGACCATGGGACAAAGATCGTGATGGTTTTGTAATGGGTGAAGGCTCTGGTGTGCTGGTAGAATCTAGAACACAAATTTCTTTAATAATGGAGAGTTTGGAGAGTGCAACAAAAAGGGGAGCCAGAATAATAGCAGAATATTTGGGGGGTGCCATAACTTGTGATGCTCATCACATGACTGATCCGAGATCTGATGGACTTGGAGTTTCATCTTGCATAACAAAGAGTTTAGAAGATGCCGGAGTTTCCCCACAAGAGGTGAACTATGTGAATGCTCATGCCACGTCAACGCTGGCTGGTGACCTCGCTGAAGTTAATGCAATAAAAAAGGTTTTTAAAGACACATCAGGATTGAAAATGAATGCAACTAAGTCGATGATTGGTCATGGTCTTGGGGCTGCTGGTGGTTTGGAAGCCATAGCAACTATCAAAGCCATAACAACTGGCTGGTTGCATCCAACCATTAACCAAGATAACTTGGAGGCTAGTGTTACAATTGACACTGTTCCTAACGTTAAGAAGCGGCATGAAGTTAATGTTGGTATATCCAACTCATTTGGCTTCGGTGGACACAACTCAGTAGTTGTCTTTGCCCCATTCAGGCCATAAGTAGAATCCAAACTCAACCTTAGTATTTCTTGTTTTTAGTCATTTTTCTCTTCACATTTTGAGAACCAGTGATTTTTGGACACAAATTCATATAGACAATATGAGTTATGGACGCAAAATAGTGGTATTTCTTTTCATATTTTTTGAAATCATAAAAGGGTATATGACTAACTACCAGATCATGTGGTCCAATGTATTGAGCCCTGAAGTCAATAAAATGTTATTTTCAGC 1815 0.4292 MQDQSEQMRDQDQDQDDECTKSDTHQESEKEMAGIAGTCPLGALLANKVSESNGNSVVHYKGLRLQHRMQMPSRQISYSSAPRCRTIKAMASPTVAAPKREKDPKKRVVITGMGLVSVFGSDIDVFYKRLLEGESGISVIDRFDASNFSVRFGGQIRDFSSEGYIDGKNDRRLDDCWRYCIVAGKRALDDANLGQQVLNTMDKTRIGVLVGSGMGGLTAFSSGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVVGGTEAAIMPTGVGGFIACRALSQRNEDPKKASRPWDKDRDGFVMGEGSGVLVESRTQISLIMESLESATKRGARIIAEYLGGAITCDAHHMTDPRSDGLGVSSCITKSLEDAGVSPQEVNYVNAHATSTLAGDLAEVNAIKKVFKDTSGLKMNATKSMIGHGLGAAGGLEAIATIKAITTGWLHPTINQDNLEASVTIDTVPNVKKRHEVNVGISNSFGFGGHNSVVVFAPFRP 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00764 527 CDD KAS_I_II 106 522 IPR000794 -
Pste3g00764 527 Pfam Beta-ketoacyl synthase, C-terminal domain 370 482 IPR014031 -
Pste3g00764 527 NCBIfam beta-ketoacyl-ACP synthase II 106 522 IPR017568 GO:0006633|GO:0016747
Pste3g00764 527 FunFam 3-oxoacyl-[acyl-carrier-protein] synthase 2 80 527 - -
Pste3g00764 527 SUPERFAMILY Thiolase-like 106 366 IPR016039 GO:0016746
Pste3g00764 527 ProSitePatterns Ketosynthase family 3 (KS3) active site signature. 260 276 IPR018201 GO:0004315|GO:0006633
Pste3g00764 527 Pfam Beta-ketoacyl synthase, N-terminal domain 106 345 IPR014030 -
Pste3g00764 527 MobiDBLite consensus disorder prediction 1 31 - -
Pste3g00764 527 Gene3D - 71 526 IPR016039 GO:0016746
Pste3g00764 527 PANTHER POLYKETIDE SYNTHASE-RELATED 104 525 IPR000794 -
Pste3g00764 527 SUPERFAMILY Thiolase-like 320 523 IPR016039 GO:0016746
Pste3g00764 527 MobiDBLite consensus disorder prediction 1 30 - -
Pste3g00764 527 ProSiteProfiles Ketosynthase family 3 (KS3) domain profile. 105 524 IPR020841 -
Pste3g00764 527 SMART Beta-ketoacyl synthase 108 527 IPR020841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00764 Pste-Chr3 4773129 4781967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00764 63 527 Acyl Lipid Metabolism Gene Families AT5G46290 71.694 0.0 715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00764 3 4773129 4781967 Pste3g00764 3 4773129 4781967 ECH