Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00752 TTATTATCCTTCCTCTATCAAATACAAAATTCACCTTCCAAAGGCACAGCAAAGCACAGCACAAGACAACACTATGCTGGGTCTGGTATCCGTAAAAGCCCAGCGGAAGCTGAGGCACTCGAATCTCTGTGCCAAACACGCTGAGCCAGGTGCAAGCCTCGAACAAAACCCCTTCACCACTCCCGAAAAAGCCACCCTCCCATCCCCTTCTCGCTCCTCTAAAAAGAAAACGCCAGAAACCCCTCCCAATGATGCCTCTCTCGACAACCCCGATCTCGGCCCATTCCTCCTCAAACTGGCCCGTGACACCATCGCCTCGGGCGATGGCCCTGCCAAGGCCCTTGACTTCGCCATCCGTGCCTCCAAGTCCTTCGAGCGCTGCTCCGACGAGGCCCAGCCCAGCCTCGATCTCGCCATGAGCCTCCACCCTCGGCCGCTTGAAGAAGCCGTCCCCGTCCTCCAACGCGCCATCCAAGTCCCCGACGTCTCCCTCGGCCCCGATCACGCCCTCGCCGCCTTCTCCGGCTACATGCAGCTCGGCGATACCTTCTCCATGCTCGGCCAGGTCGACCGATCCATCTCTTCCTACGACCTCGGCCTTCAGATCCAGATCCAAGCCCTTGGCGACACTGATCCCCGTGTCGGCGAAACTTGCCGATACTTGGCTGAGGCAAATGTGCAAGCGATGCAGTTTGATAAGGCGGAGGAACTGTGTAAGAAGACGCTTGAGATTCATCGTGCTCATAGTGAACCAGCTTCGCTTGAGGAAGCAGCTGATAGGAGGCTCATGGCACTGATTTGTGAGGCGAAGGGAGATTATGAATCGGCATTGGAGCATCTTGTGCTGGCTAGCATGGCCATGATCGCAAATGCTCAAGATAATGAGGTTGCGTCGATTGATGTTAGCATCGGGAACATTTACATGTCGCTTTGTCGTTTTGACGAGGCAATTTTCTCATACCAGAAGGCACTTACTGTGTTCAAGTCTGCCAAGGGTGAGAATCATCCTTCTGTTGCATCAGTTTTTGTGCGGCTTGCTGATTTGTATCATAGGACTGGCAAGCTTCGCGAGTCAAAATCGTATTGTGAGAATGCGCTTAGGATTTACTCGAAGCCGGTACCAGGGACTACTGCAGAGGAGATTGCTGGTGGCTTGACGGAGGTTTCGGCAGTTTTTGAATCCGTGGATGAGCCAGAGGAGGCGCTGAAGCTGTTGAACAGGGCGATGAAATTGTTGGAGGATAAGCCGGGCCAGCAGAGCACAATTGCAGGTATCGAGGCACGAATGGGAGTGATGTATTACATGATTGGGAGGTATGAGGACTCGAGGAACTCTTTTGAGAGTGCTGTGGCAAAACTCAGGGCCAGTGGCGAGAGGAAGAGTGCCTTCTTTGGAGTTGTTTTGAACCAGATGGGGTTGGCGTGTGTTCAACTGTTCAAGATTGATGAGGCTGCTGAGTTGTTTGAAGAAGCTAGGGGAATTCTTGAACAGGAGTGTGGCCCCTGTCATCAGGATACGCTTGGGGTATACAGCAATCTTGCAGCTACATATGATGCTATGGGAAGAGTGGGAGATGCGATTGAAATCTTAGAATATGTCCTGAAGTTGAGGGAAGAAAAACTTGGAATAGCAAATCCTGATTTTGAAGATGAGAAGCGTCGTTTGGCTGAGCTTCTGAAAGAAGCAGGCAAGACACGGGACAGAAAAGCAAAATCTCTGGAAAACCTTATTGATCCCGGCTCAAAGAGGACGAAGAAGGAGGGGACAAAGAGATGGCCTGGTTTGGGGTTTAGAATTTAACCATATTTTTATTCATATATATATTGAATGCACATTCTGTAACATAGGATATCTTGTATAGGGTTGAATATGTAATTTGGGAGGGAGCTTCCTGTTTCTTGATATTTGTTCATGCATTTGTTTTTCTTGATTAATTGCTTTATCAATTGTGTTGTGATATTTTAGCTGTACAACAAAATTCCATACATGTCCCCCGTTTCCGGAAAATGTTGAAAGCAAATTTTTATTCGAGTGAATAAATTTTGATGATATTGTG 2057 0.4915 MLGLVSVKAQRKLRHSNLCAKHAEPGASLEQNPFTTPEKATLPSPSRSSKKKTPETPPNDASLDNPDLGPFLLKLARDTIASGDGPAKALDFAIRASKSFERCSDEAQPSLDLAMSLHPRPLEEAVPVLQRAIQVPDVSLGPDHALAAFSGYMQLGDTFSMLGQVDRSISSYDLGLQIQIQALGDTDPRVGETCRYLAEANVQAMQFDKAEELCKKTLEIHRAHSEPASLEEAADRRLMALICEAKGDYESALEHLVLASMAMIANAQDNEVASIDVSIGNIYMSLCRFDEAIFSYQKALTVFKSAKGENHPSVASVFVRLADLYHRTGKLRESKSYCENALRIYSKPVPGTTAEEIAGGLTEVSAVFESVDEPEEALKLLNRAMKLLEDKPGQQSTIAGIEARMGVMYYMIGRYEDSRNSFESAVAKLRASGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEARGILEQECGPCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEDEKRRLAELLKEAGKTRDRKAKSLENLIDPGSKRTKKEGTKRWPGLGFRI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00752 575 MobiDBLite consensus disorder prediction 29 60 - -
Pste3g00752 575 ProSiteProfiles TPR repeat profile. 273 306 IPR019734 GO:0005515
Pste3g00752 575 Coils Coil 524 544 - -
Pste3g00752 575 SMART tpr_5 149 182 IPR019734 GO:0005515
Pste3g00752 575 SMART tpr_5 483 516 IPR019734 GO:0005515
Pste3g00752 575 SMART tpr_5 273 306 IPR019734 GO:0005515
Pste3g00752 575 SMART tpr_5 441 474 IPR019734 GO:0005515
Pste3g00752 575 SMART tpr_5 399 432 IPR019734 GO:0005515
Pste3g00752 575 SMART tpr_5 191 224 IPR019734 GO:0005515
Pste3g00752 575 SMART tpr_5 233 266 IPR019734 GO:0005515
Pste3g00752 575 SMART tpr_5 358 391 IPR019734 GO:0005515
Pste3g00752 575 SMART tpr_5 315 348 IPR019734 GO:0005515
Pste3g00752 575 SUPERFAMILY TPR-like 148 346 IPR011990 GO:0005515
Pste3g00752 575 Gene3D Tetratricopeptide repeat domain 116 258 IPR011990 GO:0005515
Pste3g00752 575 Pfam Tetratricopeptide repeat 272 346 - -
Pste3g00752 575 Pfam Tetratricopeptide repeat 443 515 - -
Pste3g00752 575 MobiDBLite consensus disorder prediction 540 569 - -
Pste3g00752 575 FunFam Protein KINESIN LIGHT CHAIN-RELATED 2 435 552 - -
Pste3g00752 575 Gene3D Tetratricopeptide repeat domain 259 441 IPR011990 GO:0005515
Pste3g00752 575 Gene3D Tetratricopeptide repeat domain 442 566 IPR011990 GO:0005515
Pste3g00752 575 Pfam MalT-like TPR region 121 259 IPR041617 -
Pste3g00752 575 MobiDBLite consensus disorder prediction 540 575 - -
Pste3g00752 575 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 41 556 - -
Pste3g00752 575 SUPERFAMILY TPR-like 272 512 IPR011990 GO:0005515
Pste3g00752 575 MobiDBLite consensus disorder prediction 16 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00752 Pste-Chr3 4704668 4708560 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00752 3 4704668 4708560 Pste3g00752 3 4704668 4708560 ECH