Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00747 CTGGGGTGAAGAGTAGAGTCAAGAGTGTGTAGTATGAATTCCTCACCTCACTCACTCACTCACCTCACTGTGTGACGGTCTCACTCTTGTTTCTCACTCTCACTCTCAAACCCTAACTCTCCTCCAATCCCCAATCAATGGTGATCCTATCCCAATCCACCGCCAGCTTTTCCCCTTCCTTTGTCTCCACGCGCACCGATTCCACTCGCGTCCCCTTCCCCTGCCACGTCACCTTCCGAATCCGCTCTCCCCCTCGCCGCCTCGCCGTCTATTCGCGCCTCAACTCCTCCAGGTCCCCCGACGCCGGCGGCTCCCTCTCGCCTGACAACGGAGGCGACGTCGCCTACGAGCTCCACCACGACTTCTCGCCGCAGCGCCGCCGCCGCGGCTCGCCGGTGTTCGTCACGCTGCCCGTGAATTCCGTGGGCCGAGAGGGCCGCATCACGAGGCCCAAAGCTATGATGTTCTCTCTCAAGGCGCTCGCCACGGCCGGCGTGGAAGGCGTGGTTATTGAAATTTGGTGGGGCTTGGTTGAGAAGAACAAACCTAGGGTTTACGATTGGAGAGGGTATGATGAACTCTTCACTATGGCCTGCAAGTGCGGCCTTAAGGTTCGAGCGGTTCTCGCGTTTCACCAGCATGGTAGTGGACCGGATGATCCCAATTGGATACCGCTTCCTCTATGGGTGCTTGATGAGATACAGAAAGATCTAGAGTTAACATATTGTGACAGGTTTGGAAGAAGAAATATTGAATACATTTCCCTTGGATGTGACATTCTTCCTGTGTTGCGTGGGCGTTCTCCTATTCAAGCATATGCCGATTTTATGAGGAACTTTAGGGACACTTTTAGGACTTTGCTTGGTGTTATCATCACAGGTGTACAGATTGGCATGGGTCCTGGTGGTGAGCTAAGATATCCTTCATTCTCTTCACCAGAGCCAAATTTGGCTTGGTCTCAAGAACTTGGAGAATTTCAGTGCTATGATAAGTATATGCTTGCTTCTCTGAATGCTTCTGCAAGAAATATTGGACAGCCTGAATGGGGAAATGGTGGTCCATTTGGTACTGGAACTTTGATGCAAAATCCTGAGCATACTGATTTTTTCAAAAATGATGGTGGCTCTTGGGACACACCATATGGTAAATTTTTCCTTGAGTGGTACTCAGATATGTTGCTTCTGCATGGAGAAAGGATTTGTAGGGAAGCAGAAACTATATTTAGGGGTACAGAGGTCAAGATATCAGCAAAATTGGCTGTCATTCACTGGCACTATGTCACGCAATCCCATCCATCAGAGTTAACAGCTGGCTATTATAATACTTTTAACAGGGATGGATATTTACCCATTGCCCGCATGTTTAGTAAGTATGGTTTCTCCATGTGCTGCTCTTGTTTTGAAATGCAAGACACAGCAATGCAGAAGGTCAATCCCGATGGTAGCCCAGAAGGTTTTCTTAGACAGCTTTTGCTGGCTGCTAGGCTATGTGATTTATCACTTGAAGGTCAAAATTTTTCTTCTAATTTGGATGACGGTGCATTCACCCAGGTGCTGAAAATGTCAAAATTTTACTCAGATGGGATTGAGAAACGACCTTTCTCATTCAACTTTGTAAGAATGGACAAAAGCTTGTTTGAATCCCGAAATTGGGATCGGTTTACTCGTTTTGTAAGACAAATGTCTAATGGAAATATTTTTCGAGCCAGATTAAATTCTGTTGGTGACATACGGTTGAAGACCACACCCGTGATAGCAGAAGTGGGATTGTTGTACCATCTATATCAGCACTCGTGAAACTATTCTTGTTCTCTGTTCTTTAGGCATATTCAGTATTACTGCCTTCATTGCAAGAAAGTCTGGTGACCTCCGGTCTAATGTTGTGAAATGTGTAGCTACTGCTGATTCTTCAAATGATTCTTTTATTGCTTTTTGGCAAGAAGTTACTTCCCCAAGGTAACACAATACATTGCCTTCCAGTTTTTTTTATATGGGTGGCGTGTTACCCACTTGTACCTGTATTTCGTGTAGACAGAAATATATAATTTAAAGTCAGTTACTGTTGTGATCTTGGTTCTTCACAGCCTTCTCTTTTTAATATTTTGTTCTGTTGAGATTGACTCTTGATATGCTGGTTTTATATTTTGTGGT 2150 0.4558 MVILSQSTASFSPSFVSTRTDSTRVPFPCHVTFRIRSPPRRLAVYSRLNSSRSPDAGGSLSPDNGGDVAYELHHDFSPQRRRRGSPVFVTLPVNSVGREGRITRPKAMMFSLKALATAGVEGVVIEIWWGLVEKNKPRVYDWRGYDELFTMACKCGLKVRAVLAFHQHGSGPDDPNWIPLPLWVLDEIQKDLELTYCDRFGRRNIEYISLGCDILPVLRGRSPIQAYADFMRNFRDTFRTLLGVIITGVQIGMGPGGELRYPSFSSPEPNLAWSQELGEFQCYDKYMLASLNASARNIGQPEWGNGGPFGTGTLMQNPEHTDFFKNDGGSWDTPYGKFFLEWYSDMLLLHGERICREAETIFRGTEVKISAKLAVIHWHYVTQSHPSELTAGYYNTFNRDGYLPIARMFSKYGFSMCCSCFEMQDTAMQKVNPDGSPEGFLRQLLLAARLCDLSLEGQNFSSNLDDGAFTQVLKMSKFYSDGIEKRPFSFNFVRMDKSLFESRNWDRFTRFVRQMSNGNIFRARLNSVGDIRLKTTPVIAEVGLLYHLYQHS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00747 552 Pfam Glycosyl hydrolase family 14 88 511 IPR001554 GO:0000272|GO:0016161
Pste3g00747 552 SUPERFAMILY (Trans)glycosidases 84 547 IPR017853 -
Pste3g00747 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 254 276 IPR001554 GO:0000272|GO:0016161
Pste3g00747 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 367 383 IPR001554 GO:0000272|GO:0016161
Pste3g00747 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 402 425 IPR001554 GO:0000272|GO:0016161
Pste3g00747 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 119 133 IPR001554 GO:0000272|GO:0016161
Pste3g00747 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 140 158 IPR001554 GO:0000272|GO:0016161
Pste3g00747 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 384 395 IPR001554 GO:0000272|GO:0016161
Pste3g00747 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 162 183 IPR001554 GO:0000272|GO:0016161
Pste3g00747 552 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 331 350 IPR001554 GO:0000272|GO:0016161
Pste3g00747 552 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 75 518 IPR001554 GO:0000272|GO:0016161
Pste3g00747 552 Gene3D Glycosidases 77 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00747 Pste-Chr3 4676824 4680084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00747 71 545 Glycoside Hydrolase AT4G17090 47.639 1.47e-153 449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00747 3 4676824 4680084 Pste3g00747 3 4676824 4680084 ECH