Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00725 ATCGAATCAATCTGTTGGTGGCAGTATCCTTTTCCCTTTTCCTTCTTTATTTTCTTCACCACGTACCCTTCTCTCTGTATTGACTATTGAGATTAATGCAGTGCAGAGGTGTATATTGCAGCTTAGGTACAGCTACAGCTACTGCTACAGAAAGCACCATCTGCAAAACCTGACAGTGAAAAAGAGTAACACCTTTTTTACAACTAAAGTCCCCGTCTTTTTCTCTGTCATCTAAACAAAGAAGAAGAACCAAGATTTTAATTTCCTTCCCCAACCCAAAAGTCTGGTGTCTCCCAACTCCTTCCCAATTTAAATCCAACAAACAAACACACCCTTACGTCTTAAGCCTTAATATAAATATATATATTCTCCCAACTAGTAAGTTGTAACTAACTACCAAGATGCTGGAAACAGTTAAGTACCTTCTCGGGTCAACCGGTGCTAGCGGGTTTGGCTCCAAATCCACCGCCGAACAAGTCACAGAAAACAGCACCGATCTCCGCTCCATCACCGCCATCATCACCGGTGCTACGTCTGGAATCGGAGCCGAAACGGCGCGCGTGTTAGCCAAGCGTGGTGCGAGACTGGTTCTACCGGCGCGTAGCATCAAAGCTGCGGAAGAAGCCAAAGCGCGCATAATGTCAGAGTGTCCCGATTCGGAGATACTTGTTATGGCTCTTGATCTTAGTTCTCTCAATTCGGTTGCAAACTTCGTTGCTCACTTCAACTCTCTCGGTTTGCCTCTCCATCTTCTCATAAACAACGCTGGAAAGTTTGCACATGAACACGCAATTTCTGAAGACGGAGTTGAAATGACCTTCGCCACCAATTACTTAGGTCATTTTGTGCTGACAAAGCTACTGGTGAAGACGATGGTGGAAACGGCGAAGGAGACAGGAGTGCAGGGTCGGATAGTGAACGTGTCGTCGAGCATCCACGGGTGGTTTTCCGGCGATGCGATTTCATATCTGGCTCTTATAAGCGGCAACAAAAGTCACTACCACGCCACACGTGCGTATGCTCTTTCGAAGCTCGCCAACGTTTTCCACACCAAGGAGCTTGCCCGTAGACTCCAGCAAATGGGGGCCAATGTGACCGTCAATTGTGTTCATCCTGGCATCGTCAGAACCAGACTCACCCGAGAGCGCGAGGGCTTACTCACAGATTTAGTCTTCTTTTTGGCTTCCAAGCTCTTGAAGACCATTCCTCAGGCAGCTGCTACGACATGTTACGTGGCAACTCATCCGAGACTCTTCAATGTCTCCGGCAAGTACTTTGCTGACTGCAACGAAACCACAACCTCAAAGTTGGGATCCAACTCAACTGAAGCCGCAAGGTTATGGGCCACTTCCGAGTTCATGGTTTCTAGAGGTCCAAAAGCTGCCTTTGACCTACTGAAGCACCTTGAATTTTGAAGTTTCTTTGGCAACCCAATATACATAGTATGTGATATATGATTATTTTATGGAAACTGGAAAACATACATAGGCGGTCTAGGGAGCAACCCTAATATTGTTTTGCTCTCTATGAGAAGGGTTAACTCTGCACAGTTTTATATGATCTTCCATATCTAGGGTATAATATACCATGTCAATGTATAATTATTATTTTGGTCATTAGGCTAAAGCATAGGAAACTAGTTAGTTTTATTTTATTGTTGCAAGTCTAAAATATGATTGCTTGCTTTAGATGCCTAATTAGATTGGATTGCCATATGATGATACAATGATTGTAGAGCTTGAGTTATGTTAAGTTGGATCTTAGCTAGATTGGAAATGAGAG 1782 0.4428 MLETVKYLLGSTGASGFGSKSTAEQVTENSTDLRSITAIITGATSGIGAETARVLAKRGARLVLPARSIKAAEEAKARIMSECPDSEILVMALDLSSLNSVANFVAHFNSLGLPLHLLINNAGKFAHEHAISEDGVEMTFATNYLGHFVLTKLLVKTMVETAKETGVQGRIVNVSSSIHGWFSGDAISYLALISGNKSHYHATRAYALSKLANVFHTKELARRLQQMGANVTVNCVHPGIVRTRLTREREGLLTDLVFFLASKLLKTIPQAAATTCYVATHPRLFNVSGKYFADCNETTTSKLGSNSTEAARLWATSEFMVSRGPKAAFDLLKHLEF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00725 337 PRINTS Glucose/ribitol dehydrogenase family signature 206 225 IPR002347 -
Pste3g00725 337 PRINTS Glucose/ribitol dehydrogenase family signature 37 54 IPR002347 -
Pste3g00725 337 PRINTS Glucose/ribitol dehydrogenase family signature 113 124 IPR002347 -
Pste3g00725 337 PRINTS Glucose/ribitol dehydrogenase family signature 163 179 IPR002347 -
Pste3g00725 337 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Pste3g00725 337 Pfam short chain dehydrogenase 37 249 IPR002347 -
Pste3g00725 337 PANTHER RETINOL DEHYDROGENASE 15 318 - -
Pste3g00725 337 CDD retinol-DH_like_SDR_c_like 37 314 - -
Pste3g00725 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 31 296 IPR036291 -
Pste3g00725 337 Gene3D - 22 323 - -
Pste3g00725 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 225 IPR002347 -
Pste3g00725 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 113 124 IPR002347 -
Pste3g00725 337 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 177 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00725 Pste-Chr3 4584708 4587137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00725 21 292 Acyl Lipid Metabolism Gene Families AT1G24360 27.817 6.22e-10 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00725 3 4584708 4587137 Pste3g00725 3 4584708 4587137 ECH