Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00336 GGGAAGAGTAATGATAGCCTCTTGCGTGTGTTCGTTTAGGCTGACAATGAGAATATGGTCCAGCAATGCAAAAGCAAAACGGTTGAAAGCCGAAATGAAACGGCAATGGCTTGAAGCTTGTAATGTATCCCTGGGCCAGGGCCTGGGCCTGGGCCTGGCGTCTCCAGAAAGATTCAGCGTGGCCTCATACAACATACTCGGGGATACAAATGCTTCTCAGCACTCTGATTTATATGTAAACGTTCCTTCTCGTTACATGCATTGGCCTCGTCGCAAGAGTGTTATTTGTGACGAACTCTTTGGGTGGGACCCTGACATTATATGCTTACAAGAGGTGGACAAGTATTTGGAACTCTCACACATTATGGTTAAAGCAGGATATGCAGGATCTTACACGAGACGCACTGGAGGTTCACTTGACGGTTGTGCAATGTTTTGGAAAGCTGATAAGTTCCGGTTACTAGAAGGAGAGAGCATTCAATTTAAGGACATTGGCCTTCGTCATAATGTTGCCCAACTTTCAGTTTTCGAGATGTGTGAATCTGACTCAAGAAGACTGTTAGTTGGTAACATTCACGTACTTTACAACCCAAACAAGGGAGAAGTTAAATTAGGTCAAATTCGTTTTCTCTCATCAAGAGCACAGTACCTCTCAGAGAAATGGGGTAATACCCCGGTTGTGCTAGCTGGTGATTTTAATAGTACTCCTCAGAGTGGAATATACAAGTTCTTGTCATCATCTAAGAGCTGGACAAATGAAGAGGTAAAAATTGCAACTGGAGATTCTGAGCTTCATTGGGCTGTGCATCCATTGAAGCTGAATAGCTCTTATGCCACAGTTAATGGTTCAACTAGTACACGGGGATTCAATGGTGAACCATTGGCAACTTCCTATCACTCAAAATTTCTTGGCACCGTAGATTATTTATGGTACTCCGATGGTATTTTACCTACAAGAGTTCTTGATACCGTTTCAATAAGTGATCTCCTAATAGCAGTTACCAACAATGAACGTACAGACACAGTGGCTGCAGTAGCTTCACCTATAGTATATAGTCAAGAGCCTAACGAACAG 1075 0.4307 MIASCVCSFRLTMRIWSSNAKAKRLKAEMKRQWLEACNVSLGQGLGLGLASPERFSVASYNILGDTNASQHSDLYVNVPSRYMHWPRRKSVICDELFGWDPDIICLQEVDKYLELSHIMVKAGYAGSYTRRTGGSLDGCAMFWKADKFRLLEGESIQFKDIGLRHNVAQLSVFEMCESDSRRLLVGNIHVLYNPNKGEVKLGQIRFLSSRAQYLSEKWGNTPVVLAGDFNSTPQSGIYKFLSSSKSWTNEEVKIATGDSELHWAVHPLKLNSSYATVNGSTSTRGFNGEPLATSYHSKFLGTVDYLWYSDGILPTRVLDTVSISDLLIAVTNNERTDTVAAVASPIVYSQEPNEQ 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00336 355 Gene3D Endonuclease/exonuclease/phosphatase 20 335 IPR036691 -
Pste3g00336 355 Pfam Endonuclease/Exonuclease/phosphatase family 58 318 IPR005135 GO:0003824
Pste3g00336 355 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 27 326 - -
Pste3g00336 355 SUPERFAMILY DNase I-like 53 327 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00336 Pste-Chr3 1695555 1707603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g00336 56 266 EF-hand Containing Proteins AT5G54130 28.070 2.06e-10 59.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00336 3 1695555 1707603 Pste3g00336 3 1695555 1707603 ECH