Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g00278 AAGACATCTATTGAGCCATTTTTACCCCGCGAGAAACGAAAATGACATGGCATCCTCTGATCTGATCTGTGCGGCGTGCGCCATTGACGACGAATAAGCTTCGCTGAACTGAGAGCGGAACTACGCAGCATCAGCATATTTGTATTCCGGCTCCGGGGAAGCAAATAAGAAGGGACGATGTGTTCTTCGGAGACGATCAACATCGCTGCCAGTACGCAGAAACTCGATGTTGATAATCGAATTGCACTCCGCTTCTACTACAGGATCGCCGATAATATCCTCAAACAGGCTGATATCTTTCGTGCAGAGAAAAATATTGTTGATCTATATATCATGCTTCTAAGATTTTCTAGTTTGGTCTCTGAGACAATACCACGTCATCGAGATTATAAATCATCTCCACAAGGCAAGAAAAAAGCTTTGAGAAAGAAATTATTACATTCTGTGAATGAGCTAGAAAAATTGAAGCCCAAGGTTCAACAGAAGATCAATGAGTTTAACAGCAGGCGAGCTTACCAGCACAATGTGTGGGAAAAATGTCATTCGAATAATTCAATGGATTTTTCTCCAGAGAAAATGAAAACTATGGCTAGTTATAATCAAATAAAGTTATCCAATGTAAAGCCTGTGGAAGAGAATATGAGGAGACTATCTCTAAGTCTCCCACGTCCAAAGGAGGAAACTCTCTCCAAACATTCTATTCTGGGTCCCAATGGGCTGAAAGGGCAGTGGCAACCACCTACAAGTGATAAAGGGGTCAAGTATCCAACCCTCATAGATCTGTCTCCAGTTAAAATTCCAAGGCTTCAACAACCATTGGAAGATGGATCTCTGGATAAAAAAGATAATAGCATTTCAGAACAACATAGATCCGATTTAGAATCAATTCTTACCCAGAGTGATGACTGCCTGGCAAAGCATGCTGATGAAGCTCCTTCTCTTATCTCGTTTGAAGCCACAGATATCCCTGCTCAAATAGAAGTTATCAGACAACCTTCTCCTCCACCTGTACTTGCTGAAGTACAAGATTTGGTTCCTGTAGTGTCACCTCATGTTAATGAGGAAGGATGTAAGGCAGAGATTCCAATGTCAGATGGTATTGTTCGTGCTGAGTCTCCGCTACAACTACACATTTCAACTTCTATGATGGAGAGTTTTATGAAGCTTGCCAAGTCAAACACTGACAAAAATTTAGAGACTTGTGGTATCCTTGCAGGTTTGCTTAAAAATAGAAAATTTTATATAACCGCCCTTATAATCCCAAAGCAGGAGGCAACATCCAGTTCTACGCATCCTACACAATCTTGTTTCATGTCATCAATTGATGTACACACCCATTACTCATATCAGATTATGCTGCCAGAAGCTGTTGCAATAGTCATGGCTCCAACAGACAGTTCAAGAACCCATGGCATTTTTCGGTTGACAACCCCTGGTGGAATGTCGGTCATTAGACAATGCCAGCAGCGTGGCTTTCATTCACATAATCAGCCTCCAGATGGTGGTCCCATTTACGATACATGTACAGATGTTTACATGAACCCAGATTTACAATTTGATGTCATTGATCTTCGATGATATGTAGTTTGTTGTTTCTTGATGGGTAAACTATACATCTAGCCATCTAATTGTTTATATTACCATGCTTCATAATTTATAGGTTTTACCATCAAATTAATGCAGCCGTTGACATCACCATCTTGTCTGGCTGTGTTTGTAAAAGGATTCGAACTATTCACCAATTGTCACTATTGATGTTTGTAAAAGGATTCGAACTATTCGTCAATGGTCATTATTTTTTTG 1803 0.4032 MCSSETINIAASTQKLDVDNRIALRFYYRIADNILKQADIFRAEKNIVDLYIMLLRFSSLVSETIPRHRDYKSSPQGKKKALRKKLLHSVNELEKLKPKVQQKINEFNSRRAYQHNVWEKCHSNNSMDFSPEKMKTMASYNQIKLSNVKPVEENMRRLSLSLPRPKEETLSKHSILGPNGLKGQWQPPTSDKGVKYPTLIDLSPVKIPRLQQPLEDGSLDKKDNSISEQHRSDLESILTQSDDCLAKHADEAPSLISFEATDIPAQIEVIRQPSPPPVLAEVQDLVPVVSPHVNEEGCKAEIPMSDGIVRAESPLQLHISTSMMESFMKLAKSNTDKNLETCGILAGLLKNRKFYITALIIPKQEATSSSTHPTQSCFMSSIDVHTHYSYQIMLPEAVAIVMAPTDSSRTHGIFRLTTPGGMSVIRQCQQRGFHSHNQPPDGGPIYDTCTDVYMNPDLQFDVIDLR 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g00278 466 FunFam AMSH-like ubiquitin thioesterase 3 3 119 - -
Pste3g00278 466 MobiDBLite consensus disorder prediction 215 230 - -
Pste3g00278 466 PANTHER AMSH-LIKE PROTEASE 4 370 - -
Pste3g00278 466 CDD MPN_AMSH_like 316 466 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Pste3g00278 466 Gene3D Cytidine Deaminase, domain 2 371 466 - -
Pste3g00278 466 Gene3D Cytidine Deaminase, domain 2 308 370 - -
Pste3g00278 466 SUPERFAMILY JAB1/MPN domain 316 422 - -
Pste3g00278 466 Coils Coil 90 110 - -
Pste3g00278 466 SMART pad1_6 316 419 IPR000555 GO:0005515|GO:0008233|GO:0008237
Pste3g00278 466 MobiDBLite consensus disorder prediction 161 196 - -
Pste3g00278 466 Pfam USP8 dimerisation domain 8 103 IPR015063 -
Pste3g00278 466 MobiDBLite consensus disorder prediction 211 230 - -
Pste3g00278 466 SUPERFAMILY USP8 N-terminal domain-like 21 114 - -
Pste3g00278 466 Gene3D - 3 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g00278 Pste-Chr3 1297603 1311511 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g00278 3 1297603 1311511 Pste3g00278 3 1297603 1311511 ECH