Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03736 TGGACATTGGACAAAACAAACCAAAACCTCTGATGGAACGAAAGACTAACCTCTGAATTCCCCCAACTGGGCCCCACCCTACCGTTTTTTATAATTTAATATTAATTTCCCATGTTTCTTACATTAAGCCCGTCCCTTCCAATGGTGTTAAACGCGCTGACCGATATGCAAATAGTAGTGCAACACGCATTTGGTTCCACCTTCACGTCAACGTATCACAACACACCCTCTCTTTTCCTAACGAAAACCCAACCAGCCCCTGTTTCATTCATATTTCATTGCCCACGTTGGATTCGATGGAATCGGAGAAAACAGCCTTTCGGGCCGTGGTCCTAGGAGCCTCTACCCGAGCCTCCTGGGCCCTCCTCTCCATGCTCATCACCCTCGTCACCTTTATCTCCCTCCACCTTTCCCCCAGGCCCGTCTGGCTCCTCTTCGGCCCGTACCCGGCTCCCGATCCCACAACCACCTGTTCTTCCTTCTTCCGCCATCTTCCGCCCAGGAAGCTCGTCATGTCCATCGAGGATTTCGGCGGCGTTGGCGACGGCATCACGTCCAATACTGACTCTTTTCGCAGGGCCATTCGCTACATGCACCGTTTCCAGCACCGCGGTGGGGCCCAGTTGGATATCCCCTCTGGTACCTGGCTCACCGGCAGTTTCAATCTCACCAGCAATTTCACGCTTTTTCTTCACCACGGTGCCGTCATTCTCGCCTCCCAGGTTGACGGAGGAGTATGCGGTGCTTGGGCTCCGCATGTAAAAGAGGTGAGAAATTGCTTTTTGACTTGTGTCGCGACAAACGGTACAATTAGCAACCACGTGGACCCTAAAGAATGGCCTATAATTGAGGCATTGCCATCTTATGGAAGAGGGAGAGAGAGATTGGGAGGAAGACATATTAGCCTTATTCATGGAAATGGAATTAGCAATGTTGTCATTACAGGACAAAATGGTACAGTTGATGGTCAAGGAAAGATGTGGTGGGAACTTTGGTGGAACAGAACATTGGAGCACACAAGAGGGCACCTCCTTGAACTGATAAACTCTGATAATGTTCTCATAACTAATCTCACCTTTCGAAATTCCCCTTTTTGGACCATCCATCCTGTTTACTGCAGTAATGTTGTGATCAAAGGGATGACCATCTTGGCTCCTCTTAATGCCCCGAATACTGATGGCATAGACCCAGACTCAAGTACAAATGTATGTATAGAAGATAACTACATAGAAAGTGGGGATGATCTTGTGGCCATTAAGAGTGGTTGGGATCAATATGGAATCGCCCTGGCCCATCCGAGCACAAATATTATAGTGAGGAGAATATCAGGCACTACCCCAACTTGTTCTGGAGTAGGCATAGGTAGTGAAATGTCTGGCGGAATTTCAAATATAATAATTGAGGATTTGCATGTGTGGGATTCTGCAGCTGGTGTTCGCATAAAATCTGACAAAGGAAGAGGAGGCTATATATCCAATGTTACCATAAGTGACATAAGAATGGAGAGAGTCAAGATACCCATTAGGTTCAGTAGAGGTTCTAATGACCACCCTGATGATGGGTGGGATCCAAAAGCTGTTCCTAGATTCAAAGATATTTTAATCAGTAATGTGGTCAGTTTAAATTCAACAAAAGCCCCGGTTTTGGAAGGTGTAGAGGGGTCATCATTTGAAGGCTTATGTTTCAAAAATATTACCCTACATGGGGTAGCCTCGTCTAAGAGATGGCGATGTGAATTTGTCTCTGGTTTTGCCAGCGAGGTTTTCCCTGTTCCATGTATTGAGTTGCGGAACAATAGCTGTTCATCCTGGTGTTCAACTTCTTGA 1826 0.4671 MESEKTAFRAVVLGASTRASWALLSMLITLVTFISLHLSPRPVWLLFGPYPAPDPTTTCSSFFRHLPPRKLVMSIEDFGGVGDGITSNTDSFRRAIRYMHRFQHRGGAQLDIPSGTWLTGSFNLTSNFTLFLHHGAVILASQVDGGVCGAWAPHVKEVRNCFLTCVATNGTISNHVDPKEWPIIEALPSYGRGRERLGGRHISLIHGNGISNVVITGQNGTVDGQGKMWWELWWNRTLEHTRGHLLELINSDNVLITNLTFRNSPFWTIHPVYCSNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKSGWDQYGIALAHPSTNIIVRRISGTTPTCSGVGIGSEMSGGISNIIIEDLHVWDSAAGVRIKSDKGRGGYISNVTISDIRMERVKIPIRFSRGSNDHPDDGWDPKAVPRFKDILISNVVSLNSTKAPVLEGVEGSSFEGLCFKNITLHGVASSKRWRCEFVSGFASEVFPVPCIELRNNSCSSWCSTS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03736 509 Pfam Glycosyl hydrolases family 28 204 483 IPR000743 GO:0004650|GO:0005975
Pste2g03736 509 SUPERFAMILY Pectin lyase-like 65 497 IPR011050 -
Pste2g03736 509 Gene3D - 63 484 IPR012334 -
Pste2g03736 509 PANTHER PECTIN LYASE-RELATED 42 505 - -
Pste2g03736 509 SMART pbh1 335 357 IPR006626 -
Pste2g03736 509 SMART pbh1 251 273 IPR006626 -
Pste2g03736 509 SMART pbh1 392 413 IPR006626 -
Pste2g03736 509 SMART pbh1 274 300 IPR006626 -
Pste2g03736 509 SMART pbh1 301 333 IPR006626 -
Pste2g03736 509 SMART pbh1 363 384 IPR006626 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03736 Pste-Chr2 41478474 41481815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03736 1 497 Glycoside Hydrolase AT4G33440 64.458 0.0 629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03736 2 41478474 41481815 Pste2g03736 2 41478474 41481815 ECH