Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03690 ATGAGCTCTCGTGATCTTCCTCTAATCGTGGAGCACACAACAAACTTTACAAAGCTGAGTCATGAATCAAATAAGGACCGTTCTTTCACGCGGGGCATGCATGGTCTTTTGGAAAATGAGACATGTGGCGTTAATGAATCACGCGACTTAGAGTTATTAGGCCATGCACAAATAGCCAAGAAGAGTGGTGAGAAAGAACTTGATCACGAGTTCTTGGAATGTGATCTTGTGAGCAACATGGAACAGTTATCCTTGGGCCACAATGTTGTGCATGTGGCAGCTGTTTCCGTGATGGACAACGCTGAACTGACTCAATCTTTGCTGCAACCGCTTCAACATCATTATGGCATAGACTGTGACTTAGTGTGCAGTATGGGGAAATCTTTTTTGGACCATGACGTGGAGCGTGTGGACGCTGGTTTCTTGGGGAGAACTGTTGCAGTCAAAGAAGTACATATATCGGTGCCTTGTCATGAAAATCTCAAAGATGCATTTGTATGGAATCAAGAGAATGCTACGGTGTATTGCCAAGGGAATGATTCGATGCCTAGTCATGGGAATGTTTCAGTGGATTGCAAACTACCTCATCATACCAATTGTGCGGAGTCAGGGGCTGGCGGTGTTAATGAAGGAAAGAAGGGGTATCAATGTGGCGTGAATGCTCATCTCATGCCTTTGGAGTCGACAGACACATCTTTATGTTTTTCAAAGGGACCTCATGCAGAAATTTCGAATGCTCAAGTGTGTTCTGGAAGTGTTATAAGCCTTGGTGATGCTGACTGGGAGGCGGTCTTGAATGAAAAAAATCTAATGGATATTCAGATGGAGCCAATGTCGAACTTGCCTAAAGCTGTGAAGATGAGTAAGCCTATAGTTGTTGGATGTGGCATAGAAGGGACCAAGAGGGGTGAGAGGAGTGAGATCATAACAAGGCGGGATGCAGGAACTTTCCCGGGAAATTCTCAGTCTGGGCTAATCGCTAAGAGCTCATCCCGAGAGAACTCGGGACGGGATAACTCGAAGTACAGCATGAAGAGTGGTTCCACAGACATATCTGTAACGGTGCTGCTTTTAGCTTCAATGGCCACAAAAACTTTGTCCTTCGCTCTGTCTCTCAATGACCTCACCAACTCCTTCGCTTCCTCGTCGCCACGCGCCGCCGCCGCCAAAGTTTCAGTCTTTACCGTCAGATGCTCTGCGAGGAGTGGAGAGAGGCCTTGGAAAAATTCTGATGCTAGACTTGTGTTGGAAGATGGTTCAATTTGGAGAGCGAAATCGTTTGGTGCTTCGGGGACACAAGTTGGGGAAGTTGTTTTCAATACATCATTGACAGGGTATCAAGAAATTTTGACAGATCCTAGTTATGCTGGCCAATTTGTGCTGATGACCAACCCCCATATTGGGAATACTGGCATAAATTTTGATGATGAGGAATCAATACAGTGTTTCCTTGCTGGTCTTGTAATCAGAAGTTTGAGCATCAGTACCTCTAACTGGAGATGTGCAAAGAATCTGGGGGATTACTTAGCTGAAAGGAATATCATGGGAATATATGATGTTGATACTCGGGCAATCACACGAAGGCTGCGGCAAGATGGAAGTCTTATTGGTGTCTTGAGCACTGACAATTCCAAAACAGATGAGGAACTACTTCAGATGTCTAAGTCGTGGGACATTGTTGGTATTGATCTAATAAGTGGAGTATCATGCAAAACTCCACATGAATGGGTTGATAAAACAAAGCAACAATGGGAGTTTAGTTCCGGTAAAGTGCCTGGAGAGACTTTCCATGTAGTTGCTTATGATTTTGGAATCAAGCATAATATACTTAGACGCCTAGCATCTTATGGATGCAAAATCACTGTTGTGCCATCTACATGGCCAGCATCAGAAACTTTGAAGATTAAGCCAGATGGAGTTCTTTTCAGCAATGGCCCTGGAGATCCTTCTGCCGTTCCTTATGCTGTTGAAACTGTGAAGAATATTATCGGGAAGGTGCCTGTTTTTGGAATTTGCATGGGTCATCAATTGCTAGGCCAGGCATTAGGAGGTAAAACATTCAAGATGAAATTTGGTCACCACGGAGGAAATCATCCTGTCCGTAACCTTCGAACTGGCCATGTTGAAATTAGTGCTCAGAACCACAACTATGCTGTTGACCCTGCCACACTGCCGGAAGGAGTCGAGGTTACTCATATCAATCTCAATGATGGAAGTTGTGCTGGTCTTGCTTTCCCTGCTCAACAACTTATGTCTCTTCAATACCACCCTGAAGCATCCCCTGGGCCACATGATTCTGACTATGCTTTTAGAGAGTTTATAGAGCTAATGAAGCAAGGAAAGAACAGAACAAAGGAAAGACTACACAAACTATCAGCTGTGCATGCTTTGGATGCATAGTGGTTAAAGCGAGCTGCTCCAAAAAGAATAAAGAAGCATTTGCTGAAAAACTGATTCTGTCTATGATTTTGTAGATGAGTTTATTAATTATTAAGTTATCCTAGATCGATTTAGTTTTTCTTATGTCCGTTCTCTGTGCAAGAGTAAGTATGGTCATACTTGTCATAAGCCTCACCATGAGGCTTTACTGTACTACACGCTGTCGGCACCAAATTTTGTTGCTGGCATTATTTGTTAATTTTGTGGCTGGCATTGTTTGTTTCTTTTTAAGAAGTTAAACTAA 2683 0.4346 MSSRDLPLIVEHTTNFTKLSHESNKDRSFTRGMHGLLENETCGVNESRDLELLGHAQIAKKSGEKELDHEFLECDLVSNMEQLSLGHNVVHVAAVSVMDNAELTQSLLQPLQHHYGIDCDLVCSMGKSFLDHDVERVDAGFLGRTVAVKEVHISVPCHENLKDAFVWNQENATVYCQGNDSMPSHGNVSVDCKLPHHTNCAESGAGGVNEGKKGYQCGVNAHLMPLESTDTSLCFSKGPHAEISNAQVCSGSVISLGDADWEAVLNEKNLMDIQMEPMSNLPKAVKMSKPIVVGCGIEGTKRGERSEIITRRDAGTFPGNSQSGLIAKSSSRENSGRDNSKYSMKSGSTDISVTVLLLASMATKTLSFALSLNDLTNSFASSSPRAAAAKVSVFTVRCSARSGERPWKNSDARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGINFDDEESIQCFLAGLVIRSLSISTSNWRCAKNLGDYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLSTDNSKTDEELLQMSKSWDIVGIDLISGVSCKTPHEWVDKTKQQWEFSSGKVPGETFHVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKIKPDGVLFSNGPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNLRTGHVEISAQNHNYAVDPATLPEGVEVTHINLNDGSCAGLAFPAQQLMSLQYHPEASPGPHDSDYAFREFIELMKQGKNRTKERLHKLSAVHALDA 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03690 799 FunFam Carbamoyl-phosphate synthase small chain 409 558 - -
Pste2g03690 799 Pfam Glutamine amidotransferase class-I 601 775 IPR017926 -
Pste2g03690 799 SUPERFAMILY Class I glutamine amidotransferase-like 576 779 IPR029062 -
Pste2g03690 799 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 709 720 - -
Pste2g03690 799 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 667 683 - -
Pste2g03690 799 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 684 701 - -
Pste2g03690 799 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 598 612 - -
Pste2g03690 799 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 637 651 - -
Pste2g03690 799 Gene3D - 559 781 IPR029062 -
Pste2g03690 799 SUPERFAMILY Carbamoyl phosphate synthetase, small subunit N-terminal domain 411 555 IPR036480 -
Pste2g03690 799 MobiDBLite consensus disorder prediction 304 345 - -
Pste2g03690 799 Hamap Carbamoyl-phosphate synthase small chain [carA]. 410 781 IPR006274 GO:0004088|GO:0006207|GO:0006541
Pste2g03690 799 CDD GATase1_CPSase 598 774 IPR035686 -
Pste2g03690 799 MobiDBLite consensus disorder prediction 315 333 - -
Pste2g03690 799 PANTHER CARBAMOYLTRANSFERASE FAMILY MEMBER 408 773 - -
Pste2g03690 799 FunFam carbamoyl-phosphate synthase small chain, chloroplastic 559 781 - -
Pste2g03690 799 PRINTS Anthranilate synthase component II signature 667 678 - -
Pste2g03690 799 PRINTS Anthranilate synthase component II signature 640 649 - -
Pste2g03690 799 PRINTS Anthranilate synthase component II signature 752 765 - -
Pste2g03690 799 Pfam Carbamoyl-phosphate synthase small chain, CPSase domain 414 538 IPR002474 -
Pste2g03690 799 Gene3D - 410 558 IPR036480 -
Pste2g03690 799 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 597 783 - -
Pste2g03690 799 NCBIfam glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 412 779 IPR006274 GO:0004088|GO:0006207|GO:0006541
Pste2g03690 799 SMART CPSase_sm_chain_2 410 540 IPR002474 -
Pste2g03690 799 PRINTS Glutamine amidotransferase superfamily signature 640 649 - -
Pste2g03690 799 PRINTS Glutamine amidotransferase superfamily signature 752 765 - -
Pste2g03690 799 PRINTS Glutamine amidotransferase superfamily signature 667 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03690 Pste-Chr2 40364443 40384358 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03690 2 40364443 40384358 Pste2g03690 2 40364443 40384358 ECH