Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03659 CACACACCTATGTATTATTCTACCTGGATGGTTATCTATCTGTTGGCTGATTTTTTGTATTTGCGGCTTTTGTTGTGGCCACAATAAATCCATTTAGTTAAGTTAAACAAAACCCAGTGAAGGAAGTGCAAAAGTATATCTAGTGGCTTGCGATTGCGAAACCTGTTTATGGGTTGAAATTTAGTTGTGCATTTGTGGGGAAGAGAACTCACACAATATCTGTTCTCCCTCCTCAGTTCCATATCCGTTAATCTTTTTCTATCAACAATGGACTTGGCTGCGAAGCTTCACCACATAGACCTCACCGGCGCGGTCATTTTGGATGCACGAAAGCCCTCCGTACTCCGCCACCCTCCGCCACGCGTCCTCAGCAGAGTCACCACCATCGCCACCAATTTAATATGCATCAAGCGCTTCTCGGGCCCACTGAGGCCTAATTCCGCTGCCTCATCGAGCCTCTCGACTGTGACCGTGGAGGACGACATCGAGTCTCTGTTTTCCAAGGAGTCTTCCTCGGAGGAGGAGCGGCGCGTGAGGAAGCAACCGAGCAGCGGCGCGTCGGGCGTTTCGTCCGGTGTGAAGCTGGAAAACGTGGGGAAAGCGTACAAAGGCGTGACGGTGTTGAAGGACGTGAGTTGGGAGGTGAAGAAGGGGGAGAAGGTGGGTTTGGTGGGCGTGAACGGCGCGGGGAAGACGACGCAGATGAGGATTATCGCGGGTTTGGAGGAGCCTGATTTTGGGAACGTGGTGAAGGCGAAGGCGAACATGAGAATCGCGTTTCTGAACCAGGAGTTCGAGGTGTCGCCGAGTAGGACGGTGAGGGAGGAGTTCATGAGCGCGTTCAAGGAGGAAATGGAGGTGGCTGGGAAGTTGGAGAAGGTTCAGAAGGCCCTGGAGGGTGCTGTCAATGATTTGGAGTTGATGGGGAGGCTTTTGGATGAGTTTGATTTGCTTCAACGGCGAGCGCAATCTGTGGACCTTGATGAGGTTGATTCCAAGATAAGTAAGTTGATGCCTGACCTTGGTTTTTCTGCTGAGGATTCTGATAGGTTGGTCGCTTCTTTCAGTGGAGGCTGGCAAATGAGGATGTGTCTTGGCAAGATTTTACTTCAGGAGCCTGATTTGTTGCTGTTAGATGAGCCTACAAATCACCTTGACCTTGACACCATTGAATGGCTTGAGGACTATCTTAACCAGCAGGAAGTGCCGATGGTTATCATTTCCCATGACCGAGCTTTTCTTGATCAGCTGTGTACAAAAATTGTGGAAACTGACATGGGTGTGTCCAGGACGTTTGAGGGAAATTATTCTCAGTATAAACTGGAGAGACTTCAGGAAGAAGAATTAGTGGAGAAGCCATTTGAACGGAAACAAATGAAAATCACGTTCCCTGAACGGGGAAGGAGTGGAAGATCTGTTGTATCAGTTAAGAACTTGGAATTTGGCTTTGAGGGTAAGACACTTTTTAAAAAGGCAAATCTTACTATTGAAAGGGGAGAAAAAATTGCCATTATAGGTCCGAATGGATGTGGCAAGAGTACTTTACTGAAATTGATTATGGGTCTGGAACAGCCAACTGGAGGTGAAATTTTGCTTGGGGAGCATAATGTATTGCCTAACTATTTTGAGCAGAATCAGGCTGAGGCACTTGATCTGGAAAAGACTGTGCTTGAGACAGTAGAGGGAGCTGCAGAGGACTGGAGGATTGATGATATTAAAGGGCTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGACCGAAAAGTTTCACTATTGAGTGGTGGTGAGAAGGCACGGCTGGCTTTTTGCAAATTCATGGTAAAACCATCAACTCTGCTTGTGTTGGATGAACCAACGAATCACTTGGATATACCTTCTAAAGAAATGCTCGAGGAGGCAATAACTGAATACCAGGGCACTGTTATCACAGTATCTCATGACCGATACTTTATAAAGCAAATAGTTAATAGAGTGATAGAAATTAGGGATGGCACTATACAGGATTATGCAGGAGATTACAATTATTATTTAGAGAAGAATCTTGATGCTAGGGAAAGAGAACTTGAACGCGAGGCAGAACTTGATAGTAAAGCTCCTAAAGTGAAAGCCAAATCTAAGATGTCCAAGGCTGAGAAAGAAGCACGGAAGAAACAAAAGATGCAGGCTTTTCAGGCAGCAAAACAGAAGTCTAAAGGCGTGAAAAATGCGAAGAGATGGAATTGAGGGAACCATTTCAATGTTAGAGTAGTTTACTATAAGGTGGTGATGTAGCATATTGGGTTAGCTACACAGCCTTTGTATAATCATGTATCTATTCACTAACTAAATTACGGGAATATAGAAGGATGATTACACAGCATCTCTGATTCTCAACTGCGACTTGCTACCCTGGGCATGCTAATTCACTCATTAAGTGCGAATAACAAACGAAAGCAACTGGCCTAGAGATAACACCAATTATTTATTTTGGGTCCAAGTAGAGATATAACTTTTCTTTGGAAAAAGCTATTTTAGGCTTAACGGGCTTTATTTATTTAACTGATATGAAACATGCAGCTACTTTTAGTTGTGGGCATCTTTTTTTGTCCCTTTTAAGAAGGCAG 2606 0.4467 MDLAAKLHHIDLTGAVILDARKPSVLRHPPPRVLSRVTTIATNLICIKRFSGPLRPNSAASSSLSTVTVEDDIESLFSKESSSEEERRVRKQPSSGASGVSSGVKLENVGKAYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGLEEPDFGNVVKAKANMRIAFLNQEFEVSPSRTVREEFMSAFKEEMEVAGKLEKVQKALEGAVNDLELMGRLLDEFDLLQRRAQSVDLDEVDSKISKLMPDLGFSAEDSDRLVASFSGGWQMRMCLGKILLQEPDLLLLDEPTNHLDLDTIEWLEDYLNQQEVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYKLERLQEEELVEKPFERKQMKITFPERGRSGRSVVSVKNLEFGFEGKTLFKKANLTIERGEKIAIIGPNGCGKSTLLKLIMGLEQPTGGEILLGEHNVLPNYFEQNQAEALDLEKTVLETVEGAAEDWRIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAITEYQGTVITVSHDRYFIKQIVNRVIEIRDGTIQDYAGDYNYYLEKNLDARERELEREAELDSKAPKVKAKSKMSKAEKEARKKQKMQAFQAAKQKSKGVKNAKRWN 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03659 652 CDD ABCF_EF-3 385 577 - -
Pste2g03659 652 Gene3D - 381 650 IPR027417 -
Pste2g03659 652 SMART AAA_5 128 343 IPR003593 GO:0016887
Pste2g03659 652 SMART AAA_5 409 577 IPR003593 GO:0016887
Pste2g03659 652 MobiDBLite consensus disorder prediction 602 632 - -
Pste2g03659 652 ProSitePatterns ABC transporters family signature. 504 518 IPR017871 GO:0005524|GO:0016887
Pste2g03659 652 MobiDBLite consensus disorder prediction 602 652 - -
Pste2g03659 652 Coils Coil 612 641 - -
Pste2g03659 652 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 351 643 - -
Pste2g03659 652 ProSitePatterns ABC transporters family signature. 266 280 IPR017871 GO:0005524|GO:0016887
Pste2g03659 652 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 339 IPR027417 -
Pste2g03659 652 Gene3D - 101 379 IPR027417 -
Pste2g03659 652 FunFam ABC transporter ATP-binding protein 348 614 - -
Pste2g03659 652 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 385 600 IPR003439 GO:0005524
Pste2g03659 652 MobiDBLite consensus disorder prediction 76 92 - -
Pste2g03659 652 Pfam ABC transporter 119 294 IPR003439 GO:0005524
Pste2g03659 652 MobiDBLite consensus disorder prediction 76 102 - -
Pste2g03659 652 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 104 362 IPR003439 GO:0005524
Pste2g03659 652 Pfam ABC transporter 401 532 IPR003439 GO:0005524
Pste2g03659 652 CDD ABCF_EF-3 105 334 - -
Pste2g03659 652 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 590 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03659 Pste-Chr2 39590439 39596391 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03659 382 602 Calmodulin-binding Proteins AT2G36910 24.696 1.97e-12 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03659 2 39590439 39596391 Pste2g03659 2 39590439 39596391 ECH