Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03653 ATGTCGACCCACTCTCCTTCAGAGTCAGAATCAGCGGAAGGCAAGAACCTAATCCCGTCCCTACCAGACGACGTAGCTTTGAACTGCCTGGCGCGCATCCCTCGGTGGCAGCACCCAACTCTATCTCTGGTTTCCAAACCCATCCGCACCGTCCTCTCTTCCTCTCTCTTGTTCACCACGCGCTCGCTCCTCCAATGCACCCAGCCCCTCCTCTACCTCACTCTCCGCTCACGCGACTCCTCCCTCCAATGGTTCACGCTCCACCGTACAAACCCTAACCCACTCCTCGCCCCGCTCCCTCCCATCCCCTCCCCCGCCGTCGGCTCCGCCTACGCCGTCCTCGGCCCCACCATCTTCGTCCTCGGTGGCTCCATCAACGACCTCCCCTCCCCCCACGTCTGGCTCCTCGACTGCCGCTTCCACCGCTGGATCCCCGGCCCCTCCATGCGCGTTGCCCGCGAGTTCGCTGCTGCCGGCGTCCTCGCCGGCAAGATCTACGTCCTCGGCGGCTGCATCGCCGACACCTGGGCCCGCTCCGCCAACTGGGCCGAGGTCCTCGACCCCGCCGTGGGCCGCTGGGAGAGAGTCCCCAGCCCCGCCGAGGTCCGGGAGAAGTGGATGCACGCAAGCGCCGTCGTTGGCGACAGAGTGTACGCCATGGCGGACCGCGGCGGCATCTCGTTCGAGCCGCGCAGCGGCGCGTGGGAGAGCGTGGGGGGAGACTTGGACCACGGGTGGAGAGGGAGGGCGTGCGTGGTGGAGGGAATTTTGTATTGCTACGACTATTTGGGGAAAATCAAAGGGTTCGACGTGGGGCGCGGGGTGTGGGAGGAGTTAAAGGGGTTGGATAAGGGTTTACCGAGGTTTCTGTGTGGGGCCACCATGGCTGATTTGGGTGGGAAATTGTGTGTCGTTTGGGAGTGTCAAGGGAATGGGAAAGAAATGGAGATTTGGTACGCTGAAATTGGGGTGAAGAAGAATTCAGATGGTGAACTGTGGGGTCAACTTGGTTGGTTAGGGAAGCTTCTTTCTCTTCCCAAAGGTTCCTCCATTGTACATTGCTCTTCTGTTGCCGTGTGA 1080 0.6176 MSTHSPSESESAEGKNLIPSLPDDVALNCLARIPRWQHPTLSLVSKPIRTVLSSSLLFTTRSLLQCTQPLLYLTLRSRDSSLQWFTLHRTNPNPLLAPLPPIPSPAVGSAYAVLGPTIFVLGGSINDLPSPHVWLLDCRFHRWIPGPSMRVAREFAAAGVLAGKIYVLGGCIADTWARSANWAEVLDPAVGRWERVPSPAEVREKWMHASAVVGDRVYAMADRGGISFEPRSGAWESVGGDLDHGWRGRACVVEGILYCYDYLGKIKGFDVGRGVWEELKGLDKGLPRFLCGATMADLGGKLCVVWECQGNGKEMEIWYAEIGVKKNSDGELWGQLGWLGKLLSLPKGSSIVHCSSVAV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03653 359 Gene3D - 62 329 IPR015915 GO:0005515
Pste2g03653 359 SMART kelc_smart 117 163 IPR006652 GO:0005515
Pste2g03653 359 SMART kelc_smart 164 216 IPR006652 GO:0005515
Pste2g03653 359 SUPERFAMILY F-box domain 11 101 IPR036047 GO:0005515
Pste2g03653 359 CDD F-box_AtAFR-like 17 61 - -
Pste2g03653 359 Pfam Kelch motif 153 199 IPR006652 GO:0005515
Pste2g03653 359 Pfam Kelch motif 106 150 IPR006652 GO:0005515
Pste2g03653 359 SUPERFAMILY Kelch motif 77 326 IPR015915 GO:0005515
Pste2g03653 359 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 10 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03653 Pste-Chr2 39481818 39482897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03653 21 343 Miscellaneous Gene Families AT4G33900 37.037 4.30e-58 191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03653 2 39481818 39482897 Pste2g03653 2 39481818 39482897 ECH