Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03456 ATGGAGATTGCACAGACAACCATAACTTTGAAATTCTACTTTCGAACTCAAACAAAAACCCAATCCAATCCCATGGAAAGGTCTAGATCTAAGAGGAACTACTACTATGACCAAGACTATGATTCTGAGACCTTGGCCAGGACCAGGCCGCGCTATAATCACCACTACAGCACCGGCGGCGGAAACCACCGCCATCGCGGCGGTGCCACCCGCCATGCCAAGACCCAGGACTCGCCCTTGACCGTCACGACCAGCTACCGCATTCTGTGTCACGACATGAAGGCCGGTGGTGTCATTGGCAAGTCCGGCAGCATTATAAAGTCGATACGCCAGCACACTGGCGCGTGGATCAACGTGCACGAGCTCATGCCTGGTGACGAGGAGCGGATCATCGAGATTTCGGACACGCGCCGGCGCGACCCCGAGGGCCGAATGCCGTCGTTCTCTCCGGCGCAGGAGGCGCTGCTGCTGATCCATGAGCGGATTCTGGAGAGCGACGCGGCGTTCGGAGTGGCGGAGGAGGAAGACGAGTATGGCGGAAGGGGCGGCGGGAGGGACCGCGTGGCAACGAGGTTGGTGGTGTCGCGAATGCATGTGGGTTGCCTTTTGGGGAAAGGAGGGAAGATTATTGAACAAATGAGGATGGAAACCAAGACGCAAATTAGGATACTCCCTAGAGATCACAACCTTCCTCGTTGTGTTTCAATGTCCGAAGAGATTGTTCAGGTTGTAGGTGATGTAAATGCTGTAAAGAATGCTCTAGTAATTATATCATCACGGTTGAGGGAGAGCCAACACCGTGATCGCAGTCATTTCCATGGACGTGTACATTCACCAGAGCGTTTTTTCTCTCCTGATGATGATTATATTTCTCATGTGACTAGTGGATCTCGTAGATCGTCTATGGATGGAGCCGCTTTTGGATCACGAGGATCTAACACAAATAGCAGAAACAGTAACCACCCATCATTGAGTTATGCATTGGAACCTGGGTCTGCTCCTGTTGCCGATGATGCACAGGGCTACTATGGGGAGGAGCTTGTTTTCCGTATACTCTGTCCAGTTGAGAAAGTTGATCGAATTATTGGGGAATCAGATGGAATTGTAGAGTTCCTTCAGAATGAAGTTGGTGTAGATGTTAAGGTCACTGATCCTGTTGGCGGTTCGGATGAACAGATAATAATCATTACTTCAGAGGAGGGTCCTGATGATGAGCTTTTCCCAGCTCAGGAAGCTTTGTTACATATACAAACCCGTATCGTTGATCTTGTTCTAGATAAGGACAATACTATAACCACAAGGCTTGTTGTCCCAACTAGTGATGTTGAATGCTTAGATGGAAAAGATGTTTCACTTTCTGAAATAAGGAGGTTGACTGGTGCAAATATTCAAATTTTGCCAAGAGATGAGCTGCCTATCTGTGTTGCAAAAACTGATGAACTCGTACAGGTTTCCCGTGATGCTGTTGTGGAAGTGACATCAAGATTAAGAAGTTATTTGTACAGGGATTTCTTTCAAAGGGACATAGTACCATTACCAGCTCCCTTACCTGGTTTGGAGGCATCTTCGTCCAATAATGTAGTTCCAGTTACTGACACTCCCACAAACTATCAAAATGTGCAAACTGTTGCAGCAGCCCTTCCATCCAAGGAAACTGGAGGATCTAGCACTGAGACAGGAAAGCAGAAAGAAAATGACCGTCGCGAAGATGTGCTTAGTGGTTTAAATAGGATTGCTGTGCCTCTTGTCACCAGGAGTACGCTTGAAGTTGTTTTACCAGAGTATGCTGTACCTAAGCTTATAGCAAAATCCAAAAGCAAACTTGCCCAAATAAGCGAGTTATCAGGGGCCAATGTAACCCTAGTAGAGGATAGACCAGATGCAACACAGAAGATTATTCAGATATCTGGTACTCCAGAGCAGGCAGAGAGAGCTCAGAGCTTGCTCCAAGGATTTATTTTGAGCAGGAATGGTTCCATCTCATTTTCTATTCATACCTCATACCCTTACTACGTACAAATCGGGAAATTCAAGAGTACCAATGCAACTCTACTGGAAAGATTTGAGAGATTTTCTGAGCTATTTCATTCCATGCTTGATTTGAAGATGATCACTGAGGGGTTGATGCTTGGAAAACAATATGGGACGGGGCAGGACCAATTGAATATCATAGACAAGAACAAAGGTGGGTCTAACATATTAGAGGATGAGAAAGACCTATGA 2223 0.4669 MEIAQTTITLKFYFRTQTKTQSNPMERSRSKRNYYYDQDYDSETLARTRPRYNHHYSTGGGNHRHRGGATRHAKTQDSPLTVTTSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRRRDPEGRMPSFSPAQEALLLIHERILESDAAFGVAEEEDEYGGRGGGRDRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNALVIISSRLRESQHRDRSHFHGRVHSPERFFSPDDDYISHVTSGSRRSSMDGAAFGSRGSNTNSRNSNHPSLSYALEPGSAPVADDAQGYYGEELVFRILCPVEKVDRIIGESDGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHIQTRIVDLVLDKDNTITTRLVVPTSDVECLDGKDVSLSEIRRLTGANIQILPRDELPICVAKTDELVQVSRDAVVEVTSRLRSYLYRDFFQRDIVPLPAPLPGLEASSSNNVVPVTDTPTNYQNVQTVAAALPSKETGGSSTETGKQKENDRREDVLSGLNRIAVPLVTRSTLEVVLPEYAVPKLIAKSKSKLAQISELSGANVTLVEDRPDATQKIIQISGTPEQAERAQSLLQGFILSRNGSISFSIHTSYPYYVQIGKFKSTNATLLERFERFSELFHSMLDLKMITEGLMLGKQYGTGQDQLNIIDKNKGGSNILEDEKDL 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03456 740 CDD KH-I_PEPPER_rpt1_like 346 414 - -
Pste2g03456 740 ProSiteProfiles Type-1 KH domain profile. 585 649 - -
Pste2g03456 740 MobiDBLite consensus disorder prediction 287 326 - -
Pste2g03456 740 ProSiteProfiles Type-1 KH domain profile. 346 413 - -
Pste2g03456 740 MobiDBLite consensus disorder prediction 290 326 - -
Pste2g03456 740 Pfam KH domain 190 258 IPR004088 GO:0003723
Pste2g03456 740 Pfam KH domain 587 650 IPR004088 GO:0003723
Pste2g03456 740 Pfam KH domain 86 134 IPR004088 GO:0003723
Pste2g03456 740 CDD KH-I_PEPPER_rpt2_like 190 262 - -
Pste2g03456 740 Gene3D - 345 502 - -
Pste2g03456 740 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 578 655 IPR036612 GO:0003723
Pste2g03456 740 Gene3D K Homology domain, type 1 185 266 IPR036612 GO:0003723
Pste2g03456 740 MobiDBLite consensus disorder prediction 547 569 - -
Pste2g03456 740 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 82 134 IPR036612 GO:0003723
Pste2g03456 740 Gene3D K Homology domain, type 1 584 655 IPR036612 GO:0003723
Pste2g03456 740 MobiDBLite consensus disorder prediction 56 78 - -
Pste2g03456 740 ProSiteProfiles Type-1 KH domain profile. 83 155 - -
Pste2g03456 740 CDD KH-I_PEPPER_rpt1_like 83 156 - -
Pste2g03456 740 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 74 485 - -
Pste2g03456 740 Gene3D K Homology domain, type 1 82 165 IPR036612 GO:0003723
Pste2g03456 740 ProSiteProfiles Type-1 KH domain profile. 187 257 - -
Pste2g03456 740 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 339 404 IPR036612 GO:0003723
Pste2g03456 740 SMART kh_6 584 654 IPR004087 GO:0003676
Pste2g03456 740 SMART kh_6 82 163 IPR004087 GO:0003676
Pste2g03456 740 SMART kh_6 345 418 IPR004087 GO:0003676
Pste2g03456 740 SMART kh_6 429 494 IPR004087 GO:0003676
Pste2g03456 740 SMART kh_6 186 262 IPR004087 GO:0003676
Pste2g03456 740 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 181 268 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03456 Pste-Chr2 35328789 35342998 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03456 2 35328789 35342998 Pste2g03456 2 35328789 35342998 ECH