Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03435 ACTGTTAGTGAAGTTGAGGCCTTGCATGAACTCTATAAGAAGTTGAGCAATTCGATTATTGAAGATGGTCTTATTCACAGGGAAGAATTCCAGCTAGCACTATTCAGAAATAAAAACAAGAAAAATCTGTTTGCAGATAGGATTTTTGACTTATTTGATCTCAAGCGCAATGGGGTCATTGAGTTCGGAGAATTTGTTCGATCACTGGGTGTGTTTCACCCAAATGCAGCTTTAGAAGACAAGATTACTTTTGCTTTTAAGTTGTATGATCTCAGGCAGACAGGGTTTATTGAACGAGAGGAGTTGAAGGAAATGGTATTGGCACTTCTGCACGAGTCGGATCTTGTGCTTTCAGATGATATGGTTGAAACCATTGTGGATAAGACTTTTAGTGATGCTGATATAAATGGTGATGGAAGGATCGATCAAGATGAGTGGAAAGTATTTGTATCTAAACATCCATCCTTGATAAAGAATATGACTCTGCCATATCTGAAGGACATTACCTTGGCATTTCCCAGTTTTGTCATAAGAACAGAAATTGAAGAGTCAGAAATGTGACTTTAGAAGGTTTTGGCTTCACCAGTAATGATGCTGCATAACAGTATATATATATATATATATATAT 628 0.3678 TVSEVEALHELYKKLSNSIIEDGLIHREEFQLALFRNKNKKNLFADRIFDLFDLKRNGVIEFGEFVRSLGVFHPNAALEDKITFAFKLYDLRQTGFIEREELKEMVLALLHESDLVLSDDMVETIVDKTFSDADINGDGRIDQDEWKVFVSKHPSLIKNMTLPYLKDITLAFPSFVIRTEIEESEM 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03435 186 PRINTS Recoverin family signature 95 113 - -
Pste2g03435 186 PRINTS Recoverin family signature 141 161 - -
Pste2g03435 186 PRINTS Recoverin family signature 48 69 - -
Pste2g03435 186 CDD EFh 81 151 IPR002048 GO:0005509
Pste2g03435 186 Pfam EF-hand domain pair 80 146 IPR002048 GO:0005509
Pste2g03435 186 ProSiteProfiles EF-hand calcium-binding domain profile. 77 112 IPR002048 GO:0005509
Pste2g03435 186 SUPERFAMILY EF-hand 2 175 IPR011992 -
Pste2g03435 186 Pfam EF-hand domain pair 21 67 IPR002048 GO:0005509
Pste2g03435 186 ProSiteProfiles EF-hand calcium-binding domain profile. 40 75 IPR002048 GO:0005509
Pste2g03435 186 SMART efh_1 44 72 IPR002048 GO:0005509
Pste2g03435 186 SMART efh_1 81 109 IPR002048 GO:0005509
Pste2g03435 186 SMART efh_1 125 153 IPR002048 GO:0005509
Pste2g03435 186 Gene3D - 1 184 - -
Pste2g03435 186 ProSiteProfiles EF-hand calcium-binding domain profile. 121 156 IPR002048 GO:0005509
Pste2g03435 186 FunFam calcineurin B-like protein 3 1 183 - -
Pste2g03435 186 ProSitePatterns EF-hand calcium-binding domain. 134 146 IPR018247 -
Pste2g03435 186 PANTHER CALCINEURIN B 1 183 IPR045198 GO:0005509|GO:0019722|GO:0019900
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03435 Pste-Chr2 34918397 34919929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03435 1 186 EF-hand Containing Proteins AT5G24270 76.344 2.57e-102 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03435 2 34918397 34919929 Pste2g03435 2 34918397 34919929 ECH