Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03370 AAGAATTGTAAAAAGGAAAGGGGAAGGAAGGAGTGGATCGATTCCTCAGCCCAGCAGCACCAGACATATATAAAAGCTCTTTTCCTTCCCCCAAATCCCCTCACACTCTTCCATTTTATTTTTACCTTTCTTCTTCTCTCTCTCAAAAAAATTATACAAAACAAAAAACTAGAATAACAGCAAGGTTTTTGCCATGGCATCCAAGCGGATCTTGAAGGAGCTCAAGGATCTCCAGAAGGATCCTCCTACCTCATGCAGCGCCGCTGCTGTTATGTCGATTGTTCAACAAATTATTGTTGTTGACGACACTACAATTTCTGCAATTCTGTGCCTGGAAATTGTAATTCCTTCAGTTGAGGGACTGATTAATGTTCTTATCGTTCTGGATATTAGGAATCTGTCCAGGCTAGTTAGGTGCTGTTGTTATCTAGAAGAACTTTGTGCTTATCGCATTTTCTGTCTCTTTTTTTTTATCCAAAACATTGCAGGTCCTGTTGCTGAAGACATGTTTCACTGGCAAGCAACAATTATGGGTCCTCCAGACAGTCCTTATGCTGGAGGCGTTTTCCTAGTCACTATTCATTTCCCTCCAGATTATCCCTTCAAGCCACCCAAGGTTGCATTCAGGACAAAGGTATTTCACCCAAATATAAATAGCAATGGAAGCATTTGCCTAGACATATTGAAGGAACAATGGAGCCCTGCACTAACTATTTCAAAGGTGTTACTCTCAATTTGTTCCCTATTGACGGACCCTAATCCTGATGATCCTTTGGTTCCCGAAATTGCCCACATGTACAAGACAGACCGGAACAAGTACGAGTCGACTGCCAGAAGCTGGACCCAGAAATATGCCATGGGCTAACTGGTCTATGGTATGTGTGAGGGAGAGCCTTCTACTTCCAGTGTTTAGGCCTCTCAACCCTTGTATGAATATTTGTCGTTTTCAATCATGATTAAGGCCCCTCCAGTTGAAGATGAATGGGGAAAAACGTTTCTCCTACTGTTTGTATTCAAAAGTTATGCGCAAAATTTTAACCGTTCGAGTAATGCCATTGCATGTTTATTTTTTTTTTTCTCGTTTATGAACTTAAAAGCCCTAATGAAATTGAAGAGTTGTTCATCACCTGGTAGTTTGTTTTTTTCTTTTTCCAAACATCTGTCACGGATCAAATATAAATTTAGTTGGATGCTCCAGAGGAACTTGATCTAAGAAGTTGTGTACAATTGCAAGTGCTGACAGCTGACAAGAAAATTAGGAGGGAAATGATCATATATATTCATTATTATACTCTGTTCGTATACTTTATAAAACATTGATTATCCTTTAAGATTTTGTTTAAGAGCTTTATACTTCGTGTGAGTCTGATGTTACTTGACACCTTGTTTGGTTGAGGGGGATTTAAAATCTCTTCTCTCTTAATTCTTAAAAGGGGAGGAAAGGAGGGAAAATTTTAATTAATAATTTTTACATGGTTTTATAAAATTGTTTTTAATTTCTTTTAATCCTTTATGAT 1517 0.3817 MASKRILKELKDLQKDPPTSCSAAAVMSIVQQIIVVDDTTISAILCLEIVIPSVEGLINVLIVLDIRNLSRLVRCCCYLEELCAYRIFCLFFFIQNIAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYESTARSWTQKYAMG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03370 223 FunFam Ubiquitin-conjugating enzyme 28, E2 94 223 - -
Pste2g03370 223 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 70 222 IPR000608 -
Pste2g03370 223 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 149 164 IPR023313 -
Pste2g03370 223 SMART ubc_7 80 222 - -
Pste2g03370 223 SUPERFAMILY UBC-like 97 222 IPR016135 -
Pste2g03370 223 Gene3D Ubiquitin Conjugating Enzyme 94 223 IPR016135 -
Pste2g03370 223 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 104 210 - -
Pste2g03370 223 Pfam Ubiquitin-conjugating enzyme 99 216 IPR000608 -
Pste2g03370 223 CDD UBCc 98 217 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03370 Pste-Chr2 33756853 33759968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03370 85 190 Miscellaneous Gene Families AT1G17280 32.432 7.37e-15 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03370 2 33756853 33759968 Pste2g03370 2 33756853 33759968 ECH