Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03349 AAGTACCCTGTGAGATATGTGCATACAGTTTCTGAGGCAGGTCGCCTTCTTCCTTCAGCTAGCCGCTGGAACTCCATAGCACTAGACTTTAAACTTGCTCCTAATTCTTCCACTGCCTATGAATTTATCCCTTCACAATACCCAAAATCTGTTGACTACAATCTTGTTATCACTGACAGGAAGCACTTTCATTGCTTTATTCTTGTTTTGGTAACAATAGTTTTTGGTATCTTAGCAGCTGTGCTGGTGGTGCACTTTTTACCTCAGAAGCACAAGCATCAAGGGTCTTCAATCAATCTTAAATTGGCAATAAACCAGGCTCTAACCTTTTATGATGCCCAAAAGTGTACTTGTCTCTTTGCTGCTACACATTTCCTTTTCTTTCTTGCTGGGCACTATCCAAGGAACAGTCCAGTGAAATTTCGGGGAGATTCAGGATTACAGGATGGGGATTCGGCTAAGACTGATCTTACTGGTGGATTTTATGATTCTGGCAACAACATTAAGTTTACCTTCACCACTGCTTATACTGTGACCTTGTTGAGTTGGACGGTTATGGAGTATCAAAGTAAATATGCTGATATTGGGGAGCTTGATCATGTCAGGGATATCATTAGATGGGGCAGTGACTACCTGTTTAAGGTGTTCATTCAGCCAGATTCAACAGCTGGATCAAACCTTACACTGTATTCCCAGGCAAGACTATCTTCGCATGTTGGAAGTACCGTCAGTAATAACGATGAGCAAAATGATGTGAATTGCTGGCAACGACCTGAAGATATGAAATATAAGAGACCAGTTTCAATATGTGATGGCTCTGCTTCAGATTTAGCTGGTGAAATTGTGGCAGCATTATCTGCAGCATCGATAGTATTCAAAGAAGAGAAAGATTACTGCAGGAGACTTGTCCAAGCAGCAGAAAGCCTCTTTGAGGCAATCATAAATGAAGATCCTTCAAAACAAGGGACCTACTCCATGGTTGATGCATGTGGAAAGCAGGCACGAATGCTTTATAACTCAACCAGTTACAAAGATGAGTTGGCTTGGGGAGCAACTTGGTTATTTCTTGCCACTGAAAACACTGATTACCTTGCAAACGCAACTGCATTTTTTTTATCAGCGAAGAGTAATGAATCAAGTGTTGATAAAGGGGTCGTTTATTGGAATAACAAGCTCAATGCTGTCGAGGTTTTGCTTACTGGTATTCGATACTTCCGTGATCCTGGCTTCCCACATGAGGATGTTTTGAAACTCTCATCTAACTCTACCGATGCCCTCATGTGTTCTTACCTATTCGATAAATACTTTAGCAGGACCCCTGGTGGATTGATTATCCTGAAACCTGATGATAACGAGCCGTTACTCCAGTATGCTGCTACAGCATCTTTTCTCACGATTACCTTGATCATCTCAAAATGTCTAGTGCAAGTTGCAAGACTGACGCATTCTCAGTGGAAATGCTTCGTGATTTTGCTACTTCTCAGGCAAATTCCTACTCTCCTGAGTCCTGACTACTTGCGTTTGCCTATAAATTGTAGAAAGACTAATTATGCTTCCTTCTGTTATGTTAACTACATCTTGGGAGAAAACCCTATGAAAATGAGCTACTTAGTGGGCTATGGAGATAGGTTTCCTGTTCAAGTCCATCATAGAAGTGCATCAATCCCTTGGAATAACCAATACTACAATTGTGATGATGGTAAGAAATGGCTAAACTCTAGAGATCCAAATCCACAGGTTCTTTTTGGAGCCATGGTGGGAGGACCAGATATAAATGACAATTTCATGGATCAAAGGATCAACCAGAAGTTCACTGAGCCAAACATAGCAAGCAATGCTGGCTTAGTTGCAGCACTGATTGCAATTCAAGATCCTCCTTACAATTCACGTGACTTCAAAAACTCATTTTGGGGATGGACT 1920 0.413 KYPVRYVHTVSEAGRLLPSASRWNSIALDFKLAPNSSTAYEFIPSQYPKSVDYNLVITDRKHFHCFILVLVTIVFGILAAVLVVHFLPQKHKHQGSSINLKLAINQALTFYDAQKCTCLFAATHFLFFLAGHYPRNSPVKFRGDSGLQDGDSAKTDLTGGFYDSGNNIKFTFTTAYTVTLLSWTVMEYQSKYADIGELDHVRDIIRWGSDYLFKVFIQPDSTAGSNLTLYSQARLSSHVGSTVSNNDEQNDVNCWQRPEDMKYKRPVSICDGSASDLAGEIVAALSAASIVFKEEKDYCRRLVQAAESLFEAIINEDPSKQGTYSMVDACGKQARMLYNSTSYKDELAWGATWLFLATENTDYLANATAFFLSAKSNESSVDKGVVYWNNKLNAVEVLLTGIRYFRDPGFPHEDVLKLSSNSTDALMCSYLFDKYFSRTPGGLIILKPDDNEPLLQYAATASFLTITLIISKCLVQVARLTHSQWKCFVILLLLRQIPTLLSPDYLRLPINCRKTNYASFCYVNYILGENPMKMSYLVGYGDRFPVQVHHRSASIPWNNQYYNCDDGKKWLNSRDPNPQVLFGAMVGGPDINDNFMDQRINQKFTEPNIASNAGLVAALIAIQDPPYNSRDFKNSFWGWT 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03349 640 SUPERFAMILY Six-hairpin glycosidases 99 623 IPR008928 GO:0005975
Pste2g03349 640 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 525 551 IPR018221 -
Pste2g03349 640 Gene3D - 97 624 IPR012341 GO:0005975
Pste2g03349 640 Pfam Glycosyl hydrolase family 9 103 619 IPR001701 GO:0004553|GO:0005975
Pste2g03349 640 PANTHER ENDO-1,4-BETA-GLUCANASE 74 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03349 Pste-Chr2 33547824 33550545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03349 49 622 Glycoside Hydrolase AT5G49720 40.684 4.57e-119 366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03349 2 33547824 33550545 Pste2g03349 2 33547824 33550545 ECH