Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03320 ATCTATCTCTCTTTTCCTTGTAATCGAGAGACATTAGGGCTAGAAAGAAACTGGAGGCAGGTCCAAGTTTTACAGCTGAGCTGATGTACCCATAATAATAATAATAATTCATTATTTAATTATTTTTACGGGCTCGCTGGTAACTTGGGTGTGTGGTGATGTTAACATAAATCTGCTGTAGGCATACATAGCAGCAACAATAACAACAACAACAGCACTTACATCCAAAGCTTAGGGTTTGCGTTTGCGGCATGAGTCGCCGGGGAATGGGCCGTGATGATGACGATGAGGAGTATGAGGAAGACGAGCAGGTTGCCGACTTCGACGAGGAGGAGGAAGATGACCACCGAGGACGCGGCGGTGGCAGGAAGCGGAGAAGATCTGGCTTCATTGACGACGATGCTGAAGAGGTTGACGAGGAGGAGGACGACGACGACGATGAAGATTTCGATGGACGAGGCGGTCGCAGGCGCCAGTACAAGAAGGTTTCCGCTTCCAATTTTTTCGACGAGGAGGCTGTTGTGGACAGCGACGAGGAAGAGGAGGAGGAAGAAGGGGAAGACGATTTCATTGTTGAGAGTGGAGCCGATCTGCCAGAAGAAGATGATGGGAGAAGGAGGCGTAGCAGTGGTATTCTTCCTCATCACCAAGAAGATCATGAAGATCTTGAAGCTGTGGCCAGAAGCATACAGGAACGTTATGGAAGGCGCATAGCAGACTATGATGAAGAAACGACAGATGTAGAACAACAAGCTCTTTTGCCTTCCGTGAGAGATCCAAAACTGTGGATGGTCAAATGTGCAATTGGTCGTGAGAGAGAAACAGCTGTTTGTCTCATGCAAAAGTATATAGATAAGGGGTCTGAATTGCAAATCAGATCAGCTATTGCTCTCGATCATTTAAAAAATTTCATATATGTGGAAGCAGATAAAGAAGCCCATGTCAGAGAGGCTTGCAAAGGTCTACGCAATATATTTGGCCAAAAGATAACACTTGTTCCGATCAGAGAAATGACTGACGTTCTGTCAGTTGAAAGCAAAGCTATTGATCTTGCCAGAGATACATGGGTTAGAATGAAGATTGGGACATATAAAGGGGACCTTGCCAAAGTTGTGGATGTGGATAATGTGCGGCAGAGGGTTACTGTCAAATTAATTCCAAGGATAGATTTACAAGCTCTTGCAAACAAATTGGAAGGTAGAGAAGTTGTGAAAAAGAAGGCTTTTGTTCCCCCTCCTCGTTTTATGAATGTTGATGAAGCAAGGGAATTGCATATTCGTGTAGAGCATAGACGTGATGCCTATGGAGAACGATTTGATGCAATTGGAGGCATGATGTTCAAAGATGGATTCTTATATAAAACTGTATCAATAAAATCCATTAGTGCTCTGAACATTAAACCCACTTTTGATGAACTTGAAAAATTTCGTAAACCGGGCGAGAGTGGAGATGGAGATGTAGCTAGTCTGTCAACTTTGTTTGCAAACAGGAAGAAAGGGCATTTTATGAAAGGTGATGCTGTCATTGTTGTCAAGGGTGATTTAAAGAACTTGAAGGGGAAGGTGGAGAAAGTTGATGAAGATAATGTTCATATAAGACCAGAAATGGAGGGACTTCCAAAAACTATTGCTGTAAATGAAAAGGAGCTTTGTAAATATTTTGAACCTGGAAACCATGTTAAGGTTGTTTCTGGTGCACAAGAGGGGGCTACGGGCATGGTTGTGAAGGTGGAGCAACATGTATTAATCTTAATATCTGATACAACAAAAGAGCATATCCGTGTATTTGCAGATGATGTTGTAGAAAGTTCAGAGGTAAATACTGGAGTTACAAGAATTGGGGACTACGAACTTCGTGATCTTGTATTGCTAGATAATAACACCTTTGGTGTCATTATACACGTAGATAGTGAGGCATTTCAGGTTCTTAAGGGGATTCCTGACAGACCTGAAGTTGTGCTTGTTAAATTAAGAGAGATCAAGTGTAAGCTTGATAAGAAAATAAGTGTTCAAGATAGGTTTAAGAATACTGTATCTTCAAAGGATGTTGTGCGAATAGTTGAGGGTCCCTGCAAAGGAAAACAAGGTCCAGTGGAGCACATATATAGAGGAATCTTATTCATCTTTGTTCGCCATCATCTTGAACATGCAGGCTTTATATGTGCTAAGGCCCAATCATGTGTAGTGGTGGGAGGTTCACGCTCCAGTGGTGACAGAAATGGTGATGCCTACTCAAGATTTGCCAGTCTAAGAAGTCCAAGTCGTATTCCACCGTCCCCTAGGAGGTTTTCTCGAGGAGGCCCAATGGATTGTATAGCTGGAGGAAGACATAGAGGTGGAAGAGGGCATGATGGTTTGGCTGGTACAACTGTTAAAGTACGCCAGGGTCCCTATAAAGGTTACCGTGGACGTGTTATAGATGATAAAGGCACATCAGTTCGTGTTGAGTTGGAATCCCAAATGAAGGTTGTGACAGTTGACCGCAATCATATATCTGACAATGTGGCTGTAACTCCACATCGTGATACTTCTCGCTATGGAATGGGAAGTGAAACTCCTATGCATCCTTCTCGAACTCCCTTACATCCATATATGACTCCAATGAGAGATCATGGAGCAACACCTATTCATGATGGAATGAGGACACCTATGCGTGATCCAGCATGGAATCCTTATACCCCAATGAGTCCTCCAAGGGATAACTGGGAAGATGGAAATCCAGGCTCTTGGGGAACCAGTCCACAGTATCAGCCTGGAAGCCCTCCTTCACGTCCATATGAGGCCCCAACTCCTGGTGCTGGTTGGGCTAGCACTCCTGGTGTAAATTATAGTGAAGCTGGAACACCACGGGACAGTTCTGCCTATGCCAATGCTCCGAGCCCATATTTACCATCAACACCTGGACAGCCTATGACGCCAAGTTCAGCATCTTATCTTCCTGGCACCCCTGGAGGACAGCCTATGACACCAGGGACAGGTGGTATGGACATGATGTCTCCAGCTTTAGGTGGGGACAACGAAGGACCATGGTTTATGCCAGATATATTAGTCAACGTACACAGGGCTGGAGATGAATCTGTTGGAGTTATAAGAGAGGTTCTATCGGATGGATCTTACCGGGTAGCTCTTGGGTCCAGTGGGAATGGTGAAACAATTACAGCGGTTCCTAATGAAATGGAGGCTGTAGTACCACGAAAATCAGACAAAATAAAGATTATGGGTGGGGCATTGCGTGGTGCTACTGGCAAGCTGATCGGTGTAGATGGCACTGATGGAATTGTAAAGATAGACATCACATTGGATGTGAAGATTTTAGACCTAGCTATTTTGGCAAAATTAGCGTAATCATTAAAAGCTTGTGGAGAGAAAATTATTTAATTGCATCTTTTCTTGCTGCGAGCGGGTTTACCGTCTGTCTCTATAATACGGTCCTCCCTAGACTAAACTAAACCTTTGTCCGCCCTATTGGTTAAGTGAAGTTTGCTCCCTAAACTAAAACTAAACCTTTGACCGCCCTATTGATCAAGTGAAGTTTGCTTCTAATAAGTAAGGAATAGCGCTAAAATGATTGCTTCCTAAGTTAGGGTTACACAAGAACTAGAATGGAATATTGAGTACCACTAAACATAATTAAAATACTGGTGCGTATTGAGTCCATTTCAAATCCAGTACATATTTATTCTTTTGACTCTGAGTAACCTAAGTTTTGGAAAATTAAACTATTTAGTTGAGTAAATCATATTTGTATCCCCTTGTATTTAAGGTTTATACTTGTATTTCTCTTGATATTTGATCATACACAATCTCCTAAAAATAATATTACCACAACTCGCATACCTTGG 3841 0.428 MSRRGMGRDDDDEEYEEDEQVADFDEEEEDDHRGRGGGRKRRRSGFIDDDAEEVDEEEDDDDDEDFDGRGGRRRQYKKVSASNFFDEEAVVDSDEEEEEEEGEDDFIVESGADLPEEDDGRRRRSSGILPHHQEDHEDLEAVARSIQERYGRRIADYDEETTDVEQQALLPSVRDPKLWMVKCAIGRERETAVCLMQKYIDKGSELQIRSAIALDHLKNFIYVEADKEAHVREACKGLRNIFGQKITLVPIREMTDVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVVKKKAFVPPPRFMNVDEARELHIRVEHRRDAYGERFDAIGGMMFKDGFLYKTVSIKSISALNIKPTFDELEKFRKPGESGDGDVASLSTLFANRKKGHFMKGDAVIVVKGDLKNLKGKVEKVDEDNVHIRPEMEGLPKTIAVNEKELCKYFEPGNHVKVVSGAQEGATGMVVKVEQHVLILISDTTKEHIRVFADDVVESSEVNTGVTRIGDYELRDLVLLDNNTFGVIIHVDSEAFQVLKGIPDRPEVVLVKLREIKCKLDKKISVQDRFKNTVSSKDVVRIVEGPCKGKQGPVEHIYRGILFIFVRHHLEHAGFICAKAQSCVVVGGSRSSGDRNGDAYSRFASLRSPSRIPPSPRRFSRGGPMDCIAGGRHRGGRGHDGLAGTTVKVRQGPYKGYRGRVIDDKGTSVRVELESQMKVVTVDRNHISDNVAVTPHRDTSRYGMGSETPMHPSRTPLHPYMTPMRDHGATPIHDGMRTPMRDPAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRPYEAPTPGAGWASTPGVNYSEAGTPRDSSAYANAPSPYLPSTPGQPMTPSSASYLPGTPGGQPMTPGTGGMDMMSPALGGDNEGPWFMPDILVNVHRAGDESVGVIREVLSDGSYRVALGSSGNGETITAVPNEMEAVVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKIDITLDVKILDLAILAKLA 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03320 1030 FunFam Transcription elongation factor SPT5 266 308 - -
Pste2g03320 1030 FunFam Transcription elongation factor SPT5 472 521 - -
Pste2g03320 1030 Gene3D - 266 308 IPR014722 -
Pste2g03320 1030 MobiDBLite consensus disorder prediction 88 113 - -
Pste2g03320 1030 MobiDBLite consensus disorder prediction 1 137 - -
Pste2g03320 1030 MobiDBLite consensus disorder prediction 857 878 - -
Pste2g03320 1030 CDD KOW_Spt5_5 702 748 IPR041978 -
Pste2g03320 1030 MobiDBLite consensus disorder prediction 755 909 - -
Pste2g03320 1030 PIRSF Spt5 2 1030 IPR017071 GO:0006357|GO:0032784
Pste2g03320 1030 CDD KOW_Spt5_3 469 519 IPR041976 -
Pste2g03320 1030 Gene3D - 412 469 IPR014722 -
Pste2g03320 1030 MobiDBLite consensus disorder prediction 50 65 - -
Pste2g03320 1030 MobiDBLite consensus disorder prediction 28 49 - -
Pste2g03320 1030 FunFam Transcription elongation factor SPT5 687 750 - -
Pste2g03320 1030 CDD KOW_Spt5_1 270 307 IPR041973 -
Pste2g03320 1030 PANTHER SUPPRESSOR OF TY 5 61 1009 IPR039659 GO:0006357|GO:0032784
Pste2g03320 1030 Pfam KOW motif 472 497 IPR005824 -
Pste2g03320 1030 ProSitePatterns Ribosomal protein L24 signature. 421 438 IPR005825 GO:0003735|GO:0005840|GO:0006412
Pste2g03320 1030 Gene3D - 472 521 IPR014722 -
Pste2g03320 1030 CDD NGN_Euk 177 259 IPR039385 -
Pste2g03320 1030 Gene3D - 157 259 IPR036735 GO:0006355
Pste2g03320 1030 SMART nusgn_4 175 261 IPR006645 GO:0140673
Pste2g03320 1030 FunFam Transcription elongation factor SPT5 157 259 - -
Pste2g03320 1030 CDD KOW_Spt5_4 597 639 IPR041977 -
Pste2g03320 1030 FunFam Transcription elongation factor SPT5 412 469 - -
Pste2g03320 1030 SUPERFAMILY Translation proteins SH3-like domain 410 448 IPR008991 -
Pste2g03320 1030 MobiDBLite consensus disorder prediction 11 27 - -
Pste2g03320 1030 Pfam Spt5 transcription elongation factor, acidic N-terminal 84 171 IPR022581 -
Pste2g03320 1030 CDD KOW_Spt5_6 973 1030 IPR041980 -
Pste2g03320 1030 SUPERFAMILY Translation proteins SH3-like domain 461 520 IPR008991 -
Pste2g03320 1030 Pfam Early transcription elongation factor of RNA pol II, NGN section 177 258 IPR005100 -
Pste2g03320 1030 SMART kow_9 979 1006 IPR005824 -
Pste2g03320 1030 SMART kow_9 700 727 IPR005824 -
Pste2g03320 1030 SMART kow_9 593 620 IPR005824 -
Pste2g03320 1030 SMART kow_9 266 293 IPR005824 -
Pste2g03320 1030 SMART kow_9 417 444 IPR005824 -
Pste2g03320 1030 SMART kow_9 469 496 IPR005824 -
Pste2g03320 1030 Gene3D - 688 750 IPR014722 -
Pste2g03320 1030 MobiDBLite consensus disorder prediction 114 137 - -
Pste2g03320 1030 CDD KOW_Spt5_2 418 468 IPR041975 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03320 Pste-Chr2 33244874 33254089 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03320 2 33244874 33254089 Pste2g03320 2 33244874 33254089 ECH