Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03188 GCTCTATTCTATTGCAAATGCGCTACTAATCCGTTGAAGTTGGAAGCACGAACACAGCTCATGGCCGCGCTCTCATGTCCACCTTTCTTCGCCCTTCAGAGAATTACTTCCATCGATGCCAAAGCCAACGCCAACGCCTTCTTCATTCGGTCTCGTCCTTCTGTTCCTCCCTGGCCTAGCCTGCTACGACGTCGTTGCGCACCCGTTCTCGCCACTCTCGCGTCCGTTAAGGAAAATCTCGGTCGCGTTCAAACGCGTTTCACCGACTTCACGAGCCTTAACTACTGGGTTGTTCGGGACTACTACCGTCTCGTGAGCTCCGTCAATGCCTTCGAGCCGCACATTCAGGCGCTCTCCGATGAACAGCTGGCTGCTAAAACCGTCGAGTTCCGCCGCCGGCTCGCGCGTGGGGCCTCGCTTGCCGACATTCAAGCTGAGGCGTTCGCTGTTGTTCGTGAAGCTGCATGGAGAAAACTTGGAATGCGCCATTTCGATGTTCAGATTATTGGTGGAGCAGTGCTGCATGATGGTTCCATTGCTGAGATGAAAACAGGGGAGGGTAAAACCTTGGTTTCCACACTAGCGGCTTATCTTAATGCCCTGTCCTCTGAGGGTGTTCATGTGGTAACCGTCAACGATTATTTAGCTCAACGTGATGCTGAATGGATGGGACGTGTTCATCGTTTCTTAGGTCTCTCCGTTGGTCTTATTCAGAGAGGAATGAATGCTGAGGAACGAAGATCCAACTACAGATGTGATATAACATATACCAATAATTCGGAACTTGGCTTTGATTACTTGCGAGATAATCTTGCTGGAAATAGCGAACAACTTTTACTTGTGACTATTTTACATGGAAGCAGGCCAAAGCCCTTTCATTTTGCAATTGTTGATGAGGTGGATTCTGTCTTGATAGATGAAGGAAGAAATCCTTTGTTAATCAGTGGTGAGGCTAGTAAAGATGCTGCACGATTCCCAGTTGCTTCAAAAGTAGCTGAACTGCTTATACAGGGGATTCATTACAAAGTGGAGCTTAAAGATAATTCCGTGGAGTTGACCGATGAAGGAATTGCTCTTGCTGAAATGGCTCTAGAAACTAATGACCTTTGGGATGAAAATGATCCTTGGGCAAGATTTGTGATGAATGCTTTAAAAGCTAAAGAATTCTATCGCCAAGATGTGCAGTACATTGTCAGAGATGGGAAGGCTTTGATTATCAACGAGCTGACAGGAAGAGTTGAGGAGAAAAGGAGATGGTCTGAGGGAATTCACCAGGCTGTGGAGGCAAAGGAAGGTTTGAAAATTCAGGCAGATTCTGTTGTTGTGGCACAGATTACATACCAATCATTATTCAAGCTCTATCCAAAGTTGTCTGGAATGACTGGGACCGCCAAAACAGAAGAGAAAGAGTTCTTAAAAATGTTCCAGATGCCTGTTATTGAAGTGCCCACAAATCTCCCTAATATTCGAAAAGATTTGCCTATTCAAGCTTTTGCTACTGTTCGTGGGAAATGGGAGCAAGTTCGCAGAGAAGTTGAATATATGTTTAGACAAGGTCGTCCTGTGTTGGTTGGAACAACTAGTGTAGAAAATTCAGAACTATTGTCTGGTCTGCTTAGGGAATGGAATATTCCTCATAATGTTCTGAATGCTAGACCTAAGTATGCTGCGAAAGAAGCTGAAATTGTTGCTCAGGCAGGACGTAAACATGCCATTACCCTCTCTACAAATATGGCAGGCAGGGGAACAGATATAATCCTTGGAGGAAATCCAAAAATGCTTGCCAGGGAAATAATAGAGGATAGCTTACTCTCATTTTTGACACGAGAGGATCCAAATTCTGAACTTGCAGATGAAGCTATTTCACAAAAGGTGCTTCCAAAGATAAAGGTTGGATCATCATCAATGGCCTTACTAGCTAAGACAGCCTTAATGGGTTCGTTGTCTAGTTCAGATATATTATCATTTCAGTGTTATACTCCTTGCAACATGAATTATTCAGCCAAATATGTATCCAAAAGTGAGGGTAGAAGTTGGACTTATCCGAAGGCTAAATCTTTTATCTTGGAGGCTATTGAAATGAGTCTTTCATATAGTTTGGAGGAGCTTGAGAAGCTTGCTAATGAAGAATCTGAGATCTACCCTCTTGGTCCAACTGTAGCACTTGCATATCTGTCAGTTTTGAAGGATTGTGAAGAACACTGTCTGCTTGAAGGTTCCGAGGTAAAAAGGCTTGGGGGTCTTCATGTGATCGGTACATCTTTACACGAGTCCCGGAGAATAGATAACCAGCTACGTGGCAGAGCAGGAAGACAGGGAGATCCAGGATCAACACGATTTATGGTCAGCTTGCAGGATGAGATGTTTCAAAAGTTCAATTTTGATACTGAATGGGCAGTGAGACTTATCTCAAAGATTACAAATGACGAGGATCTGCCAATTGAGGGTGATGCGATAGTAAAGCAGGTGCAACGAAAGCATGTTTATGATCTAAGGCAATTAATCTTAACAGGAGACGATGAAAGCTGTTCCCAACACATACTCCAGTACATGCAAGCAGTGGTGGATGAGATAGTCTTCAGTAATATTGATCCACTGCAGCATCCACGTAGCTGGGGTTTGAGTAAGCTCTTGAAAGAGTTTGTGACTGTTGGTGGAAAGCTGTTGGATGAATCTTTTGGAGGAATTAGTGATGACACTTTGCTAAATTCACTTGGGCAACTGAATGATGTGAATTCAGTTGATATTGTCAACGTTTCCCTTCCAAATTTGCCAGAACCTCCAAATGCCTTTAGGGGAATTCGCAGGAAGAGCTCTTCATTAAGACGATGGCTTGCTATTTGCACTGATGATTTAATTGGGAATGGGAAGTATCAGACAAGTTGTAATCTTCTGCGCAAGTATCTAGGAGATTTTCTAATTGCTTCATATTTAAATGTTATTGAAGAGTCTGGTTATGATGAAAGACATGCAAAGGAAATTGAGAGAGGTGTTCTTTTGCAAACTCTTGATTGTTTCTGGAGAGATCATCTTGTAAACATGAATAAGCTCAGCTCTGCGGTGAACATCAGGAGTTTTGGCCATAGAAATCCTCTTGAAGAGTATAAAATTGATGGTTGTCGGTTTTTTATCTCAATGCTCAGTGCAACTCGAAGGTTAACTGTAGAAGCATTGCTGCGGTACTGGACATCTCCAATGGAAGACCAAGAGCTATTTTTATCGTAGAAGTAGATAATTCAAGAAAATTCGAGACCAATTTTTTGCATAATGTTATGGGTGTTTCAACTAGTTGATTGGTTTGCATGGTATAGATATACCTACAGGTTACATGTCTTTAGGAGCTCAGGTTCACGCAAATGATGCACCCTATTACATAGGTATCATCGTAGAGTTTTGTACTATTTTGTTTTGACTGAGGCCTGGAGAACGGTTTTAACATTTTGCCCCCTCCCTCTTTTTACAGGCACAACAATTAAAGAAGCCGTTCCTATTTATTTTAATGCTTTTGCTTAGACACAGGTTTGTGTTGTTTAAATGGGATGATGGCTGGTGCCGAGTTCTGTAAGAGGTATGCCTAACACGACGAACACATGTCCTTCCCGTGTTCTGTTTTGTTCTTTTGAAAAGAATAGAAAGCCACAGTGTATAATATAATGCACTGTAATTTTATTTTCTCATGCTCAATGTAATTTTATTCTTTTATCGGTTTGTACAAAAAAAGAAAAT 3726 0.4224 ALFYCKCATNPLKLEARTQLMAALSCPPFFALQRITSIDAKANANAFFIRSRPSVPPWPSLLRRRCAPVLATLASVKENLGRVQTRFTDFTSLNYWVVRDYYRLVSSVNAFEPHIQALSDEQLAAKTVEFRRRLARGASLADIQAEAFAVVREAAWRKLGMRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALSSEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQRGMNAEERRSNYRCDITYTNNSELGFDYLRDNLAGNSEQLLLVTILHGSRPKPFHFAIVDEVDSVLIDEGRNPLLISGEASKDAARFPVASKVAELLIQGIHYKVELKDNSVELTDEGIALAEMALETNDLWDENDPWARFVMNALKAKEFYRQDVQYIVRDGKALIINELTGRVEEKRRWSEGIHQAVEAKEGLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQMPVIEVPTNLPNIRKDLPIQAFATVRGKWEQVRREVEYMFRQGRPVLVGTTSVENSELLSGLLREWNIPHNVLNARPKYAAKEAEIVAQAGRKHAITLSTNMAGRGTDIILGGNPKMLAREIIEDSLLSFLTREDPNSELADEAISQKVLPKIKVGSSSMALLAKTALMGSLSSSDILSFQCYTPCNMNYSAKYVSKSEGRSWTYPKAKSFILEAIEMSLSYSLEELEKLANEESEIYPLGPTVALAYLSVLKDCEEHCLLEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFNFDTEWAVRLISKITNDEDLPIEGDAIVKQVQRKHVYDLRQLILTGDDESCSQHILQYMQAVVDEIVFSNIDPLQHPRSWGLSKLLKEFVTVGGKLLDESFGGISDDTLLNSLGQLNDVNSVDIVNVSLPNLPEPPNAFRGIRRKSSSLRRWLAICTDDLIGNGKYQTSCNLLRKYLGDFLIASYLNVIEESGYDERHAKEIERGVLLQTLDCFWRDHLVNMNKLSSAVNIRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVEALLRYWTSPMEDQELFLS 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03188 1074 SMART SecA_DEAD_2 87 472 IPR011115 GO:0005524|GO:0016020|GO:0017038
Pste2g03188 1074 Pfam SecA DEAD-like domain 97 471 IPR011115 GO:0005524|GO:0016020|GO:0017038
Pste2g03188 1074 Hamap Protein translocase subunit SecA [secA]. 75 1064 IPR000185 GO:0005524|GO:0006605|GO:0006886
Pste2g03188 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 485 IPR027417 -
Pste2g03188 1074 ProSiteProfiles SecA family profile. 83 815 IPR014018 -
Pste2g03188 1074 Gene3D - 318 438 - -
Pste2g03188 1074 Gene3D Helical scaffold and wing domains of SecA 816 1062 - -
Pste2g03188 1074 SMART SecA_PP_bind_2 317 428 IPR011130 GO:0016020|GO:0017038
Pste2g03188 1074 SUPERFAMILY Pre-protein crosslinking domain of SecA 316 437 IPR036670 GO:0016020|GO:0017038
Pste2g03188 1074 SUPERFAMILY Helical scaffold and wing domains of SecA 820 1071 IPR036266 -
Pste2g03188 1074 FunFam Protein translocase subunit SecA 932 1061 - -
Pste2g03188 1074 CDD DEXDc_SecA 122 484 - -
Pste2g03188 1074 FunFam Protein translocase subunit SecA 101 327 - -
Pste2g03188 1074 CDD SF2_C_secA 490 783 IPR044722 -
Pste2g03188 1074 FunFam Preprotein translocase SecA subunit 318 438 - -
Pste2g03188 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 796 IPR027417 -
Pste2g03188 1074 Gene3D - 487 815 IPR027417 -
Pste2g03188 1074 Pfam SecA preprotein cross-linking domain 328 428 IPR011130 GO:0016020|GO:0017038
Pste2g03188 1074 Gene3D - 102 485 IPR027417 -
Pste2g03188 1074 PRINTS SecA protein signature 197 207 IPR000185 GO:0005524|GO:0006605|GO:0006886
Pste2g03188 1074 PRINTS SecA protein signature 483 496 IPR000185 GO:0005524|GO:0006605|GO:0006886
Pste2g03188 1074 PRINTS SecA protein signature 250 270 IPR000185 GO:0005524|GO:0006605|GO:0006886
Pste2g03188 1074 PRINTS SecA protein signature 409 431 IPR000185 GO:0005524|GO:0006605|GO:0006886
Pste2g03188 1074 PRINTS SecA protein signature 446 463 IPR000185 GO:0005524|GO:0006605|GO:0006886
Pste2g03188 1074 PRINTS SecA protein signature 143 167 IPR000185 GO:0005524|GO:0006605|GO:0006886
Pste2g03188 1074 PRINTS SecA protein signature 181 195 IPR000185 GO:0005524|GO:0006605|GO:0006886
Pste2g03188 1074 Pfam SecA Wing and Scaffold domain 820 1061 IPR011116 GO:0016020|GO:0017038
Pste2g03188 1074 NCBIfam preprotein translocase subunit SecA 108 823 IPR000185 GO:0005524|GO:0006605|GO:0006886
Pste2g03188 1074 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 169 338 IPR014001 -
Pste2g03188 1074 PANTHER SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 69 1071 IPR000185 GO:0005524|GO:0006605|GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03188 Pste-Chr2 31760665 31776311 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03188 2 31760665 31776311 Pste2g03188 2 31760665 31776311 ECH