Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03107 CTCAGCTCTGGTCCTAAACGACACAAGGCAACAAGCAATTTCATTAATTCTCCTTGTGTTAATTTCCCCTTATCATCATCATCATGGGATGAGATTACCTCTACAGTAGCTCCACCTAGGCTTTACAAAGCTTTGGTTAAGGATGTTGATTACCTCGTTCCAAAGACTGTGGAGGCCATCAAGAGTTATGAAATCGTTGAAGGAAATGGTGGCCCTGGAACCATCAAGAAGCTCACTTTTGTTGAGGATGGGCAAACCAAGTACGTGTTGCACAAAATAGAAGCAATTGATGATGCTAATTTGGGATACAAATACAGCATCATAGGGGGTGTGGGGTTGCCAGACACAGTGGAGAAGATATCATTTGAGGCCAAATTAGTTGCTGGCCCCAGTGGAGGATCCGTTGCAAAAATCAGTGTCAAGTTCCACACCAAAGGGGATGCTAGTCCCAGTGAAGAGGAACTCAAGGGTGCCAAAGTCAAGGGAGATACTCTTTTCAAGGCACTTGAGGGTTATGTTTTGGCCAACCCTGAGGAATTATGCGATTCCATTACACGTGTTTATGATACCCCTGCTGCTGTACCTCCTACCAGGCTTTTCAAAGCCATGACATTAGATTTTCATAACCTCTTCCCAAAACTTGTGGATAACATCCACAGTATTGTATTCACAGAAGGAAATGGTGGTCCTGGCACCATCAAGAAAATCACCACCATTGAAGGGGAGAAAAGCAAGTATGTGCTGCACAGAGTTGATGCAATAGATGAGACAAAGTTTATATATAACTTCAGCATAATTGAGGGAAGTGGGTTGGGTGATACATTGGAGAAGGTATCATTCGAGAGCCAATTGGTGGAAGGTCCAAATGGAGGTTCCATTAGGAAGGTACGTGTCCAATTTTTCACCAAAGGCGATGCAACGCTTAGCGAGGAAGAGCTCAAGGCCAACCAAGCCAAGATCCAAGGCCTTGTAAAGCTAGTTGAAGGTTACCTGTTGGCAAATCCTGATTACTGAACCACTTTATAGTTCACAATTAAGAGCTTCCATGTCTCTGGTGCAAATTAATTATAAGCCTTTATGGATTTGCAGGCTCTGCACAAAGGGCTTCTATCATATCTTTTAAGTTTTACTTATCAATCGTATGTGCTTTCTTTTTTTATATATATTTTCTTGGGTTCTTGGCTAATATACA 1192 0.4237 LSSGPKRHKATSNFINSPCVNFPLSSSSWDEITSTVAPPRLYKALVKDVDYLVPKTVEAIKSYEIVEGNGGPGTIKKLTFVEDGQTKYVLHKIEAIDDANLGYKYSIIGGVGLPDTVEKISFEAKLVAGPSGGSVAKISVKFHTKGDASPSEEELKGAKVKGDTLFKALEGYVLANPEELCDSITRVYDTPAAVPPTRLFKAMTLDFHNLFPKLVDNIHSIVFTEGNGGPGTIKKITTIEGEKSKYVLHRVDAIDETKFIYNFSIIEGSGLGDTLEKVSFESQLVEGPNGGSIRKVRVQFFTKGDATLSEEELKANQAKIQGLVKLVEGYLLANPDY 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03107 337 Pfam Pathogenesis-related protein Bet v 1 family 29 176 IPR000916 GO:0006952
Pste2g03107 337 Pfam Pathogenesis-related protein Bet v 1 family 187 334 IPR000916 GO:0006952
Pste2g03107 337 FunFam Major pollen allergen Bet v 1-A 25 180 - -
Pste2g03107 337 PRINTS Major pollen allergen Bet V1 signature 131 147 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03107 337 PRINTS Major pollen allergen Bet V1 signature 25 45 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03107 337 PRINTS Major pollen allergen Bet V1 signature 87 106 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03107 337 PRINTS Major pollen allergen Bet V1 signature 71 80 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03107 337 PRINTS Major pollen allergen Bet V1 signature 106 119 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03107 337 PRINTS Major pollen allergen Bet V1 signature 165 175 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03107 337 PRINTS Major pollen allergen Bet V1 signature 48 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03107 337 CDD Bet_v1-like 193 331 - -
Pste2g03107 337 CDD Bet_v1-like 30 173 - -
Pste2g03107 337 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 110 142 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03107 337 SUPERFAMILY Bet v1-like 29 178 - -
Pste2g03107 337 FunFam Major pollen allergen Bet v 1-A 182 337 - -
Pste2g03107 337 PANTHER - 30 178 - -
Pste2g03107 337 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 268 300 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Pste2g03107 337 Gene3D - 184 337 IPR023393 -
Pste2g03107 337 Gene3D - 26 179 IPR023393 -
Pste2g03107 337 SUPERFAMILY Bet v1-like 187 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03107 Pste-Chr2 31015772 31025892 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03107 2 31015772 31025892 Pste2g03107 2 31015772 31025892 ECH
Pste2g03107 2 31015772 31025892 Pste6g04054 6 29849929 29850819 PCT