Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03083 CCCACACCAAACATTAATCGTCCAAGAGAAAGAAAAGAAAGGAAGAAACAAAGATGAGTCCAATATGGGCTTTTGTGTTGAGTATTGCAGCAATGTTGGTGGTTGTGAATGGACAATCATCAGTGAAGCCATTGGTGAAGACAGTGAAGGGCAAGAAGGTGTGTGATAAAGGGTGGGAGTGTAAGGGTTGGTCTGCTTATTGCTGCAATGAAACTATCTCTGATTACTTCCAGACCTACCAGTTTGAGAACCTCTTTGCAAAGCGCAATTCACCAGTGGCACATGCTGTTGGATTCTGGGACTATCGTTCTTTTATCACTGCTGCAGCACTGTATCAGCCTCTTGGTTTTGGCACCACTGGAGGAAAGATCAGTGGCCAAAAGGAGGTTGCAGCTTTCCTTGGCCATGTTGGCAGCAAAACTTCTTGTGGTTATGGGGTAGCTACAGGTGGACCCTTAGCCTGGGGCTTATGCTACAACAAGGAGTTGAGTCCTGATAAATTCTACTGTGATGACTACTACAAATTAACCTACCCTTGCACTTCTGGTGCAGCATACTATGGCCGTGGCGCCATCCCAATCTACTGGAACTACAATTATGGAAAAATTGGGGAAGCCTTAAAGGTGGATCTGTTGAACCATCCAGAATACATAGAACAAAATGCCACCCTAGCCTTCCAGGCTTCAATATGGCAGTGGATGACCCCACCAGAGAAGCACCTACCTTCACCCCACGATGTCTTTGTTGGCAACTGGAAACCCACCAAGAATGACACATTGTCGAAAAGGGTACCTGGATTTGGTGCCACAATAAATTTACTATATGGTGATCAAACTTGTGGCCAAGGATCTGATAACGAGGCCATGAACAACATCGTTTCCCACTATCTTTATTACCTTGATCTCTTAGGTGTTGGCAGAGAAGAGGCAGGGCCTAATGAAGTCCTCTCATGTGCTGAACAAGCTGCCTTTAAGCCCACTGGCCCACCATCTTCTGCCACAAATTGAGCTTTACATGGTTGAGATTCTTGGCCTGTCCATTCTTGAATCCTGCCAAAAGATTCTTAATAAAGGAGGCAAGTAGACAAGATATTTCAACTACTTTTGCCTTCACATGAGACTATGAGAGTGAAATTAGCTTGGAGTGGACACTCATAGTTAATGTGTATAGATTATTATTTTGCCATATATACCTTTGTATAATTTGAATATATTTTGGTATATATTGTATACAATTGAATATTTTATCATAATGATTGTGAACAATTTTTGTTGATATTTGTATATTGTGCAATCAAGATGATACTGAGTTTCATATGAATAATGTGGTTTGTTCACTTGGTTGATATTTC 1351 0.4182 MSPIWAFVLSIAAMLVVVNGQSSVKPLVKTVKGKKVCDKGWECKGWSAYCCNETISDYFQTYQFENLFAKRNSPVAHAVGFWDYRSFITAAALYQPLGFGTTGGKISGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKELSPDKFYCDDYYKLTYPCTSGAAYYGRGAIPIYWNYNYGKIGEALKVDLLNHPEYIEQNATLAFQASIWQWMTPPEKHLPSPHDVFVGNWKPTKNDTLSKRVPGFGATINLLYGDQTCGQGSDNEAMNNIVSHYLYYLDLLGVGREEAGPNEVLSCAEQAAFKPTGPPSSATN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03083 317 Gene3D Endochitinase, domain 2 143 202 - -
Pste2g03083 317 SUPERFAMILY Lysozyme-like 55 306 IPR023346 -
Pste2g03083 317 PANTHER CHITINASE-RELATED 11 303 - -
Pste2g03083 317 Gene3D - 63 306 - -
Pste2g03083 317 FunFam Endochitinase (Chitinase) 142 202 - -
Pste2g03083 317 CDD chitinase_GH19 63 300 - -
Pste2g03083 317 PIRSF Endochitinase 1 307 IPR016283 GO:0004568|GO:0005975
Pste2g03083 317 Pfam Chitinase class I 63 290 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03083 Pste-Chr2 30768131 30770072 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03083 22 306 Glycoside Hydrolase AT3G16920 82.456 0.0 516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03083 2 30768131 30770072 Pste2g03083 2 30768131 30770072 ECH