Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g03039 GAGACACGTGAGAAAAAAGCGTGTCAATCCGAGAGGTAACAGCTTCCCCTGTTCCTCTCTTGTATTCTATTATTTTCCAATTTTGGTTCTAAGATCATAAAGGGTGGTAGCTTTGGCGATATTTTGGTGATTGAAGCACCGACAGAGGCGCGGCGGTTACCGTGGCGGTACAATGGCGGACAAGTACAACCTGAAAAACCCCGCCGTGAAGCGGATCCTCCAGGAGGTCAAGGAGATGCACTCCAACCCTTCCGACGATTTCATGAGCCTCCCCCTCGAGGAAAACATATTTGAGTGGCAATTTGCGATTAGAGGGCCTCGTGATACTGAATTTGAGGGTGGTATTTATCATGGACGGATCCAATTGCCTTCAGAGTATCCATTCAAGCCACCTTCATTTATGTTGTTGACATCTAATGGCCGTTTCGAGACTCAGACCAAGATTTGCTTGAGCATATCAAATCATCACCCTGAGCACTGGCAACCATCATGGAGTGTGAGGACTGCTTTAGTTGCACTAATTGCATTCATGCCTACCAACCCAAATGGAGCATTGGGCTCCTTAGACTACAAAAAAGAAGAGAGGCGTACCTTGGCCATTAAATCTCGTGAAGCTCCTCCTAAATTCGGGACTCCTGAACGTCAAAAGCTGATTGATGAGATACATGAGTACATGCTAAGCAAGGCTCCCCCTGTTCCTCAACCTAGCACCACAGAGGCTTCTGAAGAGAACCCCAGAAATGAGGAGGCTGAGGCACAGGTTGGTTCACCTAATCATGAGTCTTTACCAGCAGGAGAGAGGATTCCGGATCAAGAAGGTGATGGAATTATGGAAGAACAAGAAGTCCTCGCAAATGCTAACCCTACAGGAGTTGAAGTTTCAAGGGAGATTCAATCAAGTGTCTCAAGGAATGAGATGTTTCAAAAGTCAGAAACAATGGTTCACAATATTAAGCCAGAGACAAGGGTCCAGAAACCTGATGATCGGTTGTTCACATTGGCAGCTATTGGACTCACCATTGCAATTGTGGTCCTTTTGCTCAAGAAGTTCATTAAATCCACCGAACATGGGGCACTTTTCTCGGATGGATCTTAAGACGTTTCCGTTGCTGGTGTTGGCTTCAGAGATTGAAGTACTTGGCCTTTATGCAGTGAATAGAAATATAGAGCTCTTCTAAACCCATAGAAGTGTGTGTGTTTTTAAATTTTATTGTACTTTTATTATACTATCTTTGTAATTATGGTAATATAAATGTGCTCCTGCGATAAATTGTGGAGCATGTCCAGATGCCCTTTGTTTCTACTTTACCATCTGGTGTGTGAGCTATCCCCCCTTTCCAAATGGTTTGTCAACTACCTTGATTTATGTAATGACCGAAATTTATCAATAGTGGTGGCTAGTTAGCCTAAATATGATTATGCTCGTTCAGGCTTGATGTCGCCTGAAAACATCTTTCATAGAACCAAGTCTACCTGTACCTCGGC 1485 0.4404 MADKYNLKNPAVKRILQEVKEMHSNPSDDFMSLPLEENIFEWQFAIRGPRDTEFEGGIYHGRIQLPSEYPFKPPSFMLLTSNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGSLDYKKEERRTLAIKSREAPPKFGTPERQKLIDEIHEYMLSKAPPVPQPSTTEASEENPRNEEAEAQVGSPNHESLPAGERIPDQEGDGIMEEQEVLANANPTGVEVSREIQSSVSRNEMFQKSETMVHNIKPETRVQKPDDRLFTLAAIGLTIAIVVLLLKKFIKSTEHGALFSDGS 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g03039 307 CDD UBCc 12 151 IPR000608 -
Pste2g03039 307 Gene3D Ubiquitin Conjugating Enzyme 2 195 IPR016135 -
Pste2g03039 307 MobiDBLite consensus disorder prediction 171 214 - -
Pste2g03039 307 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Pste2g03039 307 SMART ubc_7 13 173 - -
Pste2g03039 307 SUPERFAMILY UBC-like 11 133 IPR016135 -
Pste2g03039 307 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 165 IPR000608 -
Pste2g03039 307 FunFam ubiquitin-conjugating enzyme E2 32 1 174 - -
Pste2g03039 307 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 10 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g03039 Pste-Chr2 30387752 30390925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g03039 1 305 Miscellaneous Gene Families AT3G17000 64.286 7.48e-134 380
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g03039 2 30387752 30390925 Pste2g03039 2 30387752 30390925 ECH