Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02903 TTCATACATAGCTCTCACGCCACCAACACTCTGCTCTCTCCTTAATCACATCCAGGTTCATCCACCGTCCTTTCCCCCTCTTCAGTCTCTGTTCTCATGCATTCTCTTTTTTCTTCCTCATTCCCCTGTTCCTCTGTTTCCCCTCTCCTCTGTTCCTGTTCTTGTTGCTGCACCGTTCCATAACCTCATTTCCCTTCAAAACACAAACTTTGGCCTTTCCCATTTCCAATTCAACCCATGGATTCTCAACCGGGCCTCTCTCTCGGGTTAAGGGCTCCTCTCCCATCACCCGCTGCTCCACTCTGTGACACCTCTGTTTCGTGGTGGTTTCGACAACCCAAAGAAGAAGACATCGAGGATGAAACGATCGACTTCATGGAGCAGCGCGTGAAGAGGAAGATGGAGGGACAGCAACAGTCGTGTTTCCCGTCGAAGCGCGTGGCGGTGGACTCCTCAGTGGGGAGGTGGAACCAGCCACTGGGCATTGCGGACCCTGAGATTTTCGAAATCATGGAGAAGGAAAAACGAAGGCAATTCAAGGGAATTGAATTGATTGCTTCTGAGAATTTCGTCTGCAGGGCAGTGCTGGAAGCTTTGGGAAGCCATTTAAGCAACAAATATTCTGAGGGAATGCCTGGGGCTAAGTACTATACTGGTAATCAGTACATTGATGAGATTGAGTTTCTGTGTTGCCAGCGTGCGTTGTTGGCTTTTGACCTTAACCCCAACAATTGGGGTGTTAACGTTCAACCTTATTCTTGTACTTCTGCTAATTTTGCTGTTTACACGGGGATTTTGCATCCTGGGGATAGGATTATGGGTCTTGATTCGCCTTCTGGGGGGCATTTGAGTCATGGTTATTACACTCTTGGAGGGAAGAAGGTTTCCGCTGCTTCTATATTTTTTGAGACTTTGCCTTATAAGGTTAATCCGCAGAGTGGTTACATAGACTATGATAAGCTTGAGGAGAAAGCGGTGGATTTCAGGCCTAAGATACTTATCTGCGGTGGGAGTTCATACCCCAGGGAATGGGATTACGCCAGGTTCAGGCAGATTGCTGATAAGTGTGGGGCCATGTTGATGTGTGACATGGCTCATATCAGTGGTCTTGTGGCTGCTAAGGAAGTAGCTAGTCCATTTGATTACTGTGATATTGTTACCTCAACCACGCACAAAAGTCTCCGAGGTCCAAGGGGAGGTATCATCTTTTATCGAAGGGGGACAAAACCAAGGAAGCCAGCTTTTGTTCTTAATCACGGAGATGATAGTAATTATGATTTTGAAGAGAAAATAAACTTTGCTCTATATCCATCGTTACAAGGAGGCCCCCACAATAATCATATTGCTGCTCTTGCCATAGCTCTAAAACAAGTTGCAACTCCAGAGTACAAAGCATACATGCAGCAGGTGAAGAGAAATGCACAGGCATTAGCATCTGCCTTGTTGAGAAGAAATTGCAGATTAGTGACTGGTGGGACCGACAATCATCTTTTGCTATGGGATCTAACAGCCCTTGGCTTAATTGACAGAAACTATGAGAAAGTCTGTGAGGCGGGTTACATCACTCTCAATAAATGTGCGATTTATGGTTCCATTTCTGCTGGAGGAGTGAGAATTGGTACTCCTGCAATGACCTCAAGAGGCTGTCTAGAGGAAGATTTTGAGATTATAGCTGATTTTCTTCTAAGGGCTGCTCAGATTACCAGCATTGTACAGAGGGAACACGGGAAATCATGCAAAGATTTTCTCAAGGGTCTTCAGAATAATAAAGACATTCTAGAGCTCAGAAATCGGGTTGAGACATTCAGTTCCCAGTTCGCAATGCCAGGATTCGATAATTGATTTGAAAGTGTAAACATCTATTGCATCATTGTGAGATGCTCTTGGTTTACATCATTTGAATTATTTTTGCACAGCAACCCATAGGTTTTTCCTCCTTTTTTCTCATATATATATATATATATATAGTTAGCAGCTAGCTTATGTAAATTGTGTATGGAAATGGTAGTCAAATCATCACGCATTGGCCATACACGATACTTAGTTACTTAGTTACACTCCGCAATCCATTATTGATGACCTCGAGATTGTAGAAACTGTTCAAGGTTAATACCTCTTTATTCGACCACAACTATTGTTTAAAGAAAATTCCAGTAATTTTATGATACAATAATAGAAATATAAA 2185 0.4334 MDSQPGLSLGLRAPLPSPAAPLCDTSVSWWFRQPKEEDIEDETIDFMEQRVKRKMEGQQQSCFPSKRVAVDSSVGRWNQPLGIADPEIFEIMEKEKRRQFKGIELIASENFVCRAVLEALGSHLSNKYSEGMPGAKYYTGNQYIDEIEFLCCQRALLAFDLNPNNWGVNVQPYSCTSANFAVYTGILHPGDRIMGLDSPSGGHLSHGYYTLGGKKVSAASIFFETLPYKVNPQSGYIDYDKLEEKAVDFRPKILICGGSSYPREWDYARFRQIADKCGAMLMCDMAHISGLVAAKEVASPFDYCDIVTSTTHKSLRGPRGGIIFYRRGTKPRKPAFVLNHGDDSNYDFEEKINFALYPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKRNAQALASALLRRNCRLVTGGTDNHLLLWDLTALGLIDRNYEKVCEAGYITLNKCAIYGSISAGGVRIGTPAMTSRGCLEEDFEIIADFLLRAAQITSIVQREHGKSCKDFLKGLQNNKDILELRNRVETFSSQFAMPGFDN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02903 534 Gene3D Aspartate Aminotransferase, domain 1 85 530 IPR015422 GO:0003824
Pste2g02903 534 Pfam Serine hydroxymethyltransferase 84 481 IPR039429 -
Pste2g02903 534 SUPERFAMILY PLP-dependent transferases 77 532 IPR015424 -
Pste2g02903 534 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 305 321 IPR019798 GO:0030170
Pste2g02903 534 FunFam Serine hydroxymethyltransferase 110 328 - -
Pste2g02903 534 PIRSF SHMT 57 534 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Pste2g02903 534 Gene3D - 110 389 IPR015421 GO:0003824
Pste2g02903 534 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 73 533 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Pste2g02903 534 CDD SHMT 85 523 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Pste2g02903 534 Hamap Serine hydroxymethyltransferase [glyA]. 80 531 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02903 Pste-Chr2 29059315 29064960 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02903 2 29059315 29064960 Pste2g02903 2 29059315 29064960 ECH