Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02854 GAAATAGTGAAGACAGAAGCCGAAACTGGAGCGGAAAATGGCTGCTTTTCGCGCCGTGCTTCGTCACATGCACATAACAAGCTTCACCTCCTTCGCTCTACTGCCGCGGCTGCCGATGACCCTACTTTTAACTCAAGCTGACACGTGGATTATTCCTTCCAGAATAGTCAAATCCCGCGCCAGTTCACACAACTACAAGTTCGTGGTAAAGAAAGACGAGCGCTTAGGAGAGTGCGCGGACGAGGTTGCGTGTGGGACCACAATTGCGGCCATCGTCACTTCCTTGGGCGGTCCTCCTGCCGCCGTTGGAATCGTTCGACTTTCGGGTCCTGGGGCACTCTCCATCGTGGGCCGAGTGTTTCGGCCTGCCAAGAAGACGTGGCGGCCCACCACCCATGTTGTGGAATACGGCGTCGTCTTGGACTCCGATGGCAACGTTATCGATGAGGTCTTGGCGGTGCCCATGCTGGCACCGAGGTCCTACACTCGCGAAGACGTGGTTGAGCTTCAGTGTCACGGGAGCGAAGTGTGTCTGCGCCGCGTGTTAAGGACTTGTTTGGAAGCCGGAGCAACTCTTGCTCAACCAGGGGAGTTTACTCTTCGCGCTTTTCTTAACGGTCGTTTGGATCTCTCACAAGCAGAAAGTGTTGCCAGATTAATCAGCGCAAAATCTGTGGGTGGTTTCTCTTCTGTTGTTCGATCATTGAGGAGTCAGTGCATTGAGTTGCTCACTGAGATTGAAGCGCGTTTAGATTTTGACGATGAGATGCCGCCTCTGGATTTGAATCTGATTATGGATAAAATCCATAACATGTCACAAGACGTTCAAAATGCGTTGGAGACGGCAAATTATGACAAGCTTCTGCAATCTGGATTGCAGATAGCAATTGTTGGCCGCCCAAATGTTGGCAAGTCAAGCCTTCTTAATGCATGGAGCAAAAGTGAGAGGGCTATAGTTACTGAAATTGCTGGAACCACTCGTGATGTGATTGAAGCAAGTATTAGTGTCAGTGGCATTCCTATAACCCTTCTTGATACAGCTGGCATCAGGGATACAGATGACATTGTGGAAAGGATTGGTGTAGAGCGATCTGAAGCAGTTGCTAGGGGAGCTGATTTAATTATCATGACTGTGAGTGCTGTTGAAGGGTGGACTTCTGAAGACACCAAACTTCTTGAGAGGATTCAAACCACTAAGGGATCAACTGGATTATCCACCCCCGTAATCCTTGTGGTCAACAAGATAGATTGTAATCCTTGTGACGAGACTGAATGGGAGAAGGGATGTCAAAGTCTTAAAATTTTCAGTAAACACGTGTTTACATGTGCTGTTACTGGTCAAGGATTGCAAGACTTAGAGACGGCAGTTTTACAGATTGTGGGTCTTGAAGGCATTCCTGCTGGGGGTCGCAGATGGACTGTCAATCGGAGACAATGTGAACAACTTGTTCGGACCAAGGAAGCACTAGCAAGGTTACAATCATCAATAAAGGAGGAACTGCCTCTGGATTTTTGGACAATTGATTTGAGGGATGCTGCATTGTCCCTTGGACAGATAAGTGGAGAAGATATATCGGAGGAGGTTTTATCAAATATATTTGGCAAGTTTTGCATTGGTAAATAGAAAGGGTGCCCATATGAGCTTGGTGAATTTTAGCTTGTTTTCTCTACGTCATTTCGATTATGTATAGGACGCCAAATTCAATTGGGGTCTGTACACCTACCATGGATTTAAATCTGTGGTGATCAGTTTTGTTGTATATCACGTGAATTGTTAAATTAATTTTTGAACATTTAAATCAAAGATCGAAATGACAGACAGTGAAATACTACAACTACAAATAAAGTAATATTCGGTAGGCTAATCCACCA 1872 0.4615 MAAFRAVLRHMHITSFTSFALLPRLPMTLLLTQADTWIIPSRIVKSRASSHNYKFVVKKDERLGECADEVACGTTIAAIVTSLGGPPAAVGIVRLSGPGALSIVGRVFRPAKKTWRPTTHVVEYGVVLDSDGNVIDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRTCLEAGATLAQPGEFTLRAFLNGRLDLSQAESVARLISAKSVGGFSSVVRSLRSQCIELLTEIEARLDFDDEMPPLDLNLIMDKIHNMSQDVQNALETANYDKLLQSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVIEASISVSGIPITLLDTAGIRDTDDIVERIGVERSEAVARGADLIIMTVSAVEGWTSEDTKLLERIQTTKGSTGLSTPVILVVNKIDCNPCDETEWEKGCQSLKIFSKHVFTCAVTGQGLQDLETAVLQIVGLEGIPAGGRRWTVNRRQCEQLVRTKEALARLQSSIKEELPLDFWTIDLRDAALSLGQISGEDISEEVLSNIFGKFCIGK 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02854 528 NCBIfam tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 88 528 IPR004520 GO:0003924|GO:0005525|GO:0006400
Pste2g02854 528 Pfam MnmE helical domain 198 525 IPR025867 -
Pste2g02854 528 Pfam GTP-binding protein TrmE N-terminus 75 195 IPR018948 -
Pste2g02854 528 NCBIfam small GTP-binding protein domain 280 409 IPR005225 GO:0005525
Pste2g02854 528 ProSiteProfiles TrmE-type guanine nucleotide-binding (G) domain profile. 279 449 IPR031168 -
Pste2g02854 528 CDD TrmE_N 75 194 IPR018948 -
Pste2g02854 528 Hamap tRNA modification GTPase MnmE [mnmE]. 74 528 IPR004520 GO:0003924|GO:0005525|GO:0006400
Pste2g02854 528 Gene3D tRNA modification GTPase MnmE domain 2 196 528 IPR027368 -
Pste2g02854 528 FunFam tRNA modification GTPase MnmE 280 456 - -
Pste2g02854 528 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 444 IPR027417 -
Pste2g02854 528 Gene3D - 280 456 IPR027417 -
Pste2g02854 528 PANTHER TRNA MODIFICATION GTPASE GTPBP3 54 528 - -
Pste2g02854 528 FunFam tRNA modification GTPase MnmE 70 195 - -
Pste2g02854 528 CDD trmE 277 449 IPR031168 -
Pste2g02854 528 Gene3D Probable tRNA modification gtpase trme; domain 1 65 195 IPR027266 GO:0005515
Pste2g02854 528 Pfam 50S ribosome-binding GTPase 281 402 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02854 Pste-Chr2 28565846 28569625 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02854 2 28565846 28569625 Pste2g02854 2 28565846 28569625 ECH