Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02654 GGAACGCCCAAACTCGACTCTATTGTCACGTTCTCGTATTCACGTGTAAGGCGTGAATTTCGCCTTGCTTGCTTCCATGCTCCTCTAGAAATATAACAAGAGCAACCGCTCAATCTCATTCCTTCACTTCCAACTCAATTAACCAATCCATCTCCTTTGCTTTCACAATGCTCCATCAGCCATTACTGTACTGTTCAAAAATCGCCACTCAATCCACACTCTTCGCTCCGGTTTTCTCCGCCGGAAACAACGCCGGTCCTTGTTTCTTTGCCGGAAATTCGTCCTTCCGTCACGTCAGGTCGTTGAGGTTTATGAAGCAAGCATCGGGAAGCAAATCGAACAGTGAACATGGTGTTTTTAGCGAGACAATGGACCGTGCTAGGCTTAACACAAATAATGCTTATGGTGGACGTGCTCCAGAGGGGCTTCTTGAGGAAGAATCCTCCAAAGTGATAGAGAGCAGGGCATCATGGAAAACTTTTCCAGGCCAGACATCTCCATTGGGTGTATCGGAAGTTGACAATGGCATCAATTTTGCTATTTTTTCACAACATGCAACTGCTGTCACACTTTGTTTGGTCCTTCTTGAGAGGGGAAGTATTGACACATTGGATGATGGCATGATAGAAATGGTTTTAGATCCTGATTTGAACAAAACTGGGGACATTTGGCACATATGTATTCAGGATCTTCCTCGTAGCAATGTTCTGTATGGGTACCGCATAGATGGACCTCGAGACTGGGGTGAGGGGCATCGATTTGACAGTAGCATTGTGCTTGTTGATCCTTATGCAAAACTAGTAGAGGGTCGAAGATATTTTGGGGATATTAGCATGAAGATGTCTAAGTTTCTAGGAACATATGATTTTGACAGCTTACCTTTTGACTGGGGAGAAAATTACAAGCTTCCAAATATATCTGAGAAAGATCTTGTTATATACGAGATGAATGTCCGGGCCTTTACAATTGATGAATCTAGTGGTTTGAATAGTAACATTCGTGGCAGCTACCTCGGTGTGATTGAAAAGATTCCACACCTTCTAGAGCTTGGTATCAATGCAGTAGAATTGCTGCCTGTCTTCGAGTTTGATGAGTTGGAATTCCAGAGGCGTCCAAATTCCAGAGATCATATGATTAATACATGGGGTTACTCAACAATAAATTTCTTTGCTCCTATGAGTCGCTATGCTAGTGCTGGCGGAGGATCAGTTAATGCTTCCCGAGAGTTCAAGCAAATGGTTAAAGCCTTCCATTCTGCTGGTATAGAGGTAATTTTGGATGTTGTGTACAATCATACTAATGAAGCTGATGATGCCTATCCATACACTACTTCATTTCGTGGCGTAGATAATAAGGTTTATTACATGCTGGACTATAATGGGCAATTGTTGAACTTCTCTGGCTGTGGCTTGGGTAGTCCAAGGCCCAATGTTTGGCTTGGACTAAAGTCTGTTGATTGCAAAGCTAGGCATGTCTGGTCTAGCCCACTAAGCATGCTGTGGAATCTTGTGCAACACCAGGGAAATACATTGAATTGTAACCATCCTGTGGTCATGGAGCTAATTCTTGACAGCCTAAGACACTGGGTCACTGAATATCATGTGGATGGATTTCGATTTGATCTTGCGAGTGTCCTTTGTCGAGGAATTGATGGCTCTCCCCTCAATGCCCCTCCACTTTTAAGGGCAATTGCTAAAGATGCGGTATTATCAAGATGTAAAATTATTGCAGAGCCTTGGGACTGTGGAGGTCTCTATCTTGTTGGGAGTTTTCCAAATTGGGATCGGTGGGCTGAATGGAATGGGAAATATCGTGATGACGTAAGGAAATTTATTAAGGGTGATTCTGGTGTGAAGGGGAGCTTCGCAACTCGTGTTTCTGGATCCTCTGATCTTTACAGAGTGAATAACCGTAGGCCATATCATAGTATTAACTTTGTTATTGCACACGATGGATTCACCTTGTGTGATCTTGTTTCGTACAATTTTAAGCACAATGAAGCCAATGGGGAGGGTGGAAATGATGGAAGCAATGATAATTTTAGTTGGAATTGTGGTTTTGAAGGTGAAACTGATGATGCTAGTATAAGAGCTTTGCGATCACGGCAAATGAAAAACTTTCATTTGGCTTTAATGATATCTCAGTTGGATGCAAGGAAGAGTGGTCACTTCAGGTTTTTCTCGAAGGTGATAAAGTATCGGCATGCACATGAAGTATTCAGTCATGAAAATTTTCTCAGCAAGAATGACATAACATGGCACGAAGACAATTGGGACAATCATGACAGCAAATTTCTTGCATTCACGCTTCATGACAGGAGCGGGGGAGATATCTATTTGGCATTTAATGCTCACGATTACTTCGTGGACACTAATCTCAAATCACAGGATGACTTTGTCCTTGATGGGGTCCCGAGCATCGGAAACACGTACAATATAGCTCCATATTCCTCCATTCTTCTTGAAGCGAAGTTTTGATCGAAGAAGCATCCATAAAAAGGAAAGAGGAATGCTGTTACATACACGCATCTCCGATGTAATGTTTATTATTTGATTTCTTCAAGGTAGCTGGCAAAGTTATAGCTTAACACTAGAAGATGTGTAGGCATAAGGCATATATAGAAGACAGAACAGAATATACCTCCATCTGCACGGAAATGTATTCTAGCTCAGCTACGGGTCAAGGAGGGGAACAAATGCGAACAAGAGAAATCGGAAATGGTTACATTCCAAGAATGGAACAGGGCATAGAGTCAGGTTACAAGCCACTTAATGCCGGTCTTGCCACTTTGAATAATCATCATATACTTCTAGTATTGGATTTTGAGTGTAATAAATGTCATTATTGATATTCTATACTTTGTTTATATTGTAAATTTGGCTCCAACGGAATAAATGTCATT 2902 0.418 MLHQPLLYCSKIATQSTLFAPVFSAGNNAGPCFFAGNSSFRHVRSLRFMKQASGSKSNSEHGVFSETMDRARLNTNNAYGGRAPEGLLEEESSKVIESRASWKTFPGQTSPLGVSEVDNGINFAIFSQHATAVTLCLVLLERGSIDTLDDGMIEMVLDPDLNKTGDIWHICIQDLPRSNVLYGYRIDGPRDWGEGHRFDSSIVLVDPYAKLVEGRRYFGDISMKMSKFLGTYDFDSLPFDWGENYKLPNISEKDLVIYEMNVRAFTIDESSGLNSNIRGSYLGVIEKIPHLLELGINAVELLPVFEFDELEFQRRPNSRDHMINTWGYSTINFFAPMSRYASAGGGSVNASREFKQMVKAFHSAGIEVILDVVYNHTNEADDAYPYTTSFRGVDNKVYYMLDYNGQLLNFSGCGLGSPRPNVWLGLKSVDCKARHVWSSPLSMLWNLVQHQGNTLNCNHPVVMELILDSLRHWVTEYHVDGFRFDLASVLCRGIDGSPLNAPPLLRAIAKDAVLSRCKIIAEPWDCGGLYLVGSFPNWDRWAEWNGKYRDDVRKFIKGDSGVKGSFATRVSGSSDLYRVNNRRPYHSINFVIAHDGFTLCDLVSYNFKHNEANGEGGNDGSNDNFSWNCGFEGETDDASIRALRSRQMKNFHLALMISQLDARKSGHFRFFSKVIKYRHAHEVFSHENFLSKNDITWHEDNWDNHDSKFLAFTLHDRSGGDIYLAFNAHDYFVDTNLKSQDDFVLDGVPSIGNTYNIAPYSSILLEAKF 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02654 769 CDD E_set_GDE_Isoamylase_N 110 259 IPR044505 -
Pste2g02654 769 Gene3D Glycosidases 235 692 - -
Pste2g02654 769 Gene3D - 693 732 IPR013780 -
Pste2g02654 769 CDD AmyAc_Glg_debranch 239 681 - -
Pste2g02654 769 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 111 209 IPR004193 GO:0004553|GO:0005975
Pste2g02654 769 SUPERFAMILY Glycosyl hydrolase domain 692 768 - -
Pste2g02654 769 SUPERFAMILY (Trans)glycosidases 238 685 IPR017853 -
Pste2g02654 769 SMART aamy 259 768 IPR006047 GO:0005975
Pste2g02654 769 Pfam Alpha amylase, catalytic domain 280 490 IPR006047 GO:0005975
Pste2g02654 769 Gene3D Immunoglobulins 91 230 IPR013783 -
Pste2g02654 769 PANTHER GLYCOGEN DEBRANCHING ENZYME 92 659 - -
Pste2g02654 769 SUPERFAMILY E set domains 106 243 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02654 Pste-Chr2 26765031 26788841 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02654 35 768 Glycoside Hydrolase AT4G09020 65.609 0.0 1032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02654 2 26765031 26788841 Pste2g02654 2 26765031 26788841 ECH