Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02593 ATGTGGGCGGCAAACAAATTGAAGCCCATCCATTCGAAACCATCGTGGATGAATATCTGGCGTGAGATGGCGAACCACTCTCTCTCCACCCGAATCAGACGTTTTGTGTTCCCCTCACCAACTCTATGTAGCTCCCTATCTTCTCGCGCTTCCGCGTTCCACGTGCCCTTCGCGCCAAAACGCATCTCCCGGAACAAGAGTCCATTGCTGGCGCTTCAAAATTGGGTGGACCAAGGCAACTATGTTTCCCCCTCCCACCTCAGAAGCATCACCAGAACCCTCCTCAAATCCAAACGCTACCACCACGCCCTTCAGGTATTTAAATGGATAGAAAACCAGAAGAATTTCCATATGATCCCAGCTGATCATGCTATGAAATTAGTGTTAATAATTGAAAATTATGGTCTAAAGGAAGCCGAAGAATATTTCATGAATCTATCTGACTCAGCTGCAAAGAAGACTGCCTGTCTCACACTTCTACGTGGCTATATAAGAGATAGGGACACTATTAAGGCTGAGGCTTTCATGGTGAAGCTCTATGAACTGGGGCTAATGTTGAGCCCTCACCCTTATAATGAGATGATGAAACTATATCTAGTAACATGTGAGTACAAGAAGGTACCCCTTGTTATTCAGCAAATGAAGCGAAATAAAGTACCTCGCAATGTTCTGTCCTACAACCTTTGGATGAATGCTTGTAGTGAGGAAGAAGGATTTCCAATCGCAGCAGCAGAGACTGTTTTTAGAGAAATGCAAAACGACAAGAATGTTGAAGTGGGATGGAGCAGTCTTGCTACATTAGCCAATGTTTATAAAAAAGCAGGACAATCTAAGAAAGCCATTCTGGTTCTCAAAGATGCTGAAAAGAAACTATCTACTTGTAACCGTCTTGGTTACTTCTTCCTCATAACACTATATGCTTCTTTGAAAGAAAGGGAAGGAGTCTTGCGGCTATGGGAAGCGAGTAAGGCAGTTGGTGGAAGAATAAGTTGTGCCAACTACATTTGCATACTATCATGCTTGGTGAAACTTGGGGACATAGTAGAAGCCAAGAGAATCTTCTTAGAATGGGAATCTAATTGTATGAAGTACGATATCAGAGTCTCTAATGTTCTTTTGGGTGCATATGTGCGGAATGGATTAATGGAAGAGGCTGAATCATTACATCTCCACACATTGGAAAAGGGTGGCTGTCCAAATTACAAGACGATGGAAATTCTCACAGAAGGATATCTGAATTGGCAAAAAATGGATGAGGCTATTATTGCCATGAAAAGAGCTTTGGCCATGACGAAAGATTGCCATTGGAGGCCACCGCATGGACTTGTGTTAGCCATTGCAGAGAATTTGGAGAAAGATGGGAATCTTGAATATGCAACCAAGTATATTATTGATGTCCATGATTTTGGTGTTGTTAGTTTACCATTGTATAAAATATTGCTTAGAGTGCACCTTTCTGCCAACAAACCACCTTTCCATATCCTTAAAATGATGGATGAAGATAAAGTTGAGATGGATAGTGAGACACATTCCATTATTAAAGCTTTCACCGGGCTGAAGTGTTTGCAGGTGAAGCAGTGACAAAGTCAATTTCATTCTTGGGTTAAAGCATGCAAAGCATGGGCAGTAATGAGAGTTTACAGGTCAAAGATTTTGTGGGATCTGAATCAGAAGCAGAAGCAGTCGAGAAGTAATGAGATTATGAGAATCAACCGGTGAAAGATTTTCTGTATGTTTGGTTGCAATCCTGAAAAATTAGACTCATGTTATGCTAAAGTAATAATAACCAGCTTCTATGGTTTTTGGGAGGCATTTGATGTGAAAACAAGCCATAAGGTGCGGTAACGAAACACACTTATTTGGGAATTGAATCAGAAAAGCTCCAGTCCAACCTCAACCTTGAAATTTCATCCATTCATATCAGTCACTTCCAGCAAATTGGTAAATATAATTCAACATGTTCCTTTGTTGTAAACAAAAGACAGCATCATATAACATGGTTGTGTAAATATATTAAGATGATCAATGG 2029 0.4076 MWAANKLKPIHSKPSWMNIWREMANHSLSTRIRRFVFPSPTLCSSLSSRASAFHVPFAPKRISRNKSPLLALQNWVDQGNYVSPSHLRSITRTLLKSKRYHHALQVFKWIENQKNFHMIPADHAMKLVLIIENYGLKEAEEYFMNLSDSAAKKTACLTLLRGYIRDRDTIKAEAFMVKLYELGLMLSPHPYNEMMKLYLVTCEYKKVPLVIQQMKRNKVPRNVLSYNLWMNACSEEEGFPIAAAETVFREMQNDKNVEVGWSSLATLANVYKKAGQSKKAILVLKDAEKKLSTCNRLGYFFLITLYASLKEREGVLRLWEASKAVGGRISCANYICILSCLVKLGDIVEAKRIFLEWESNCMKYDIRVSNVLLGAYVRNGLMEEAESLHLHTLEKGGCPNYKTMEILTEGYLNWQKMDEAIIAMKRALAMTKDCHWRPPHGLVLAIAENLEKDGNLEYATKYIIDVHDFGVVSLPLYKILLRVHLSANKPPFHILKMMDEDKVEMDSETHSIIKAFTGLKCLQVKQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02593 526 Gene3D Tetratricopeptide repeat domain 262 455 IPR011990 GO:0005515
Pste2g02593 526 PANTHER OS12G0527900 PROTEIN 60 504 - -
Pste2g02593 526 Pfam Pentatricopeptide repeat domain 183 234 IPR002885 -
Pste2g02593 526 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 365 399 IPR002885 -
Pste2g02593 526 Pfam PPR repeat 370 390 IPR002885 -
Pste2g02593 526 Pfam PPR repeat 334 360 IPR002885 -
Pste2g02593 526 Gene3D Tetratricopeptide repeat domain 60 240 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02593 Pste-Chr2 26078756 26084149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02593 60 438 EF-hand Containing Proteins AT1G02150 32.292 6.44e-68 226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02593 2 26078756 26084149 Pste2g02593 2 26078756 26084149 ECH