Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02537 CGTCCGATGAAGCAGAAAGGAAAATCAAGGAATCAGGAATCCCATCAATGGACCTGATGAATGGGCCTGTATCGGGCGTTTCTAATTGCTATGTGTTCAAGAGCCGATTACAGGAGTATGCGCAAAAGGCAGGGCTGCCCACCCCTGTCTACGAAACTATTAAGGATGGGCCTTCCCATGAACCTTCTTTCAGGTCTACAGTTATAGTGAATGAGGTTCGGTATGATTCTTTGCCTGGATTTTTCAACCGCAAGGCAGCAGAGCAGTCAGCTGCTGAAGTTGCTTTGGTGGAGTTGGCCAAATCTAATATAGTTAATCAATCCATCACTCAACCTGTTCATGAAACAGGATTATGCAAGAATTTACTTCAGGAATATGCTCAGAAAATGAACTATGCAATGCCTATGTATCAGTGCAAAAAGGATGAAACACCAGGTCGAGCATCCGTATTTTCATGTACGGTTGACATCGGGGGGATTCTCTATATTGGGGGAGCAGCAAAAACAAAGAAGGAAGCAGAGATAAAAGCTGCTAGAACTGCCTTACTAGCTATCCAGTCAAGTGCATCTCATGCTTCCCAAAACCAGGTTGACCATCCACAGTTGACAGTCCTTCCATGCAGAAAAAGGACAACAGAATCTGTTGCTGTACCCGATGAGAATTCAAATCCCCCAAAACCTAAGAAAGCACGGTTTAAAAGGAAATCTTCTAAGAGGAAACCTTCTAGAGATAAAATAGGTCAAATTCATAGTGAAAACATTAGCAATGGAGAAAATATCAATCATGAGGAAGAAACACATGCAATTGTTAATGGTGAATCTGGCGCCCATGAAAAGAAATCCGAAACATTCACTTCAGAAGCCATGAAGAGTTCTAAGAATGGAATACCAGTTAATTATCATGAGAAAGAAACATTGGCTGGGGAGGATTCTTTTGCTGTGAATAGCCAAGATGGAATTTTTGAAAATCGGAAGTCAGCAGAATTATATTCTAAGGAGAACAATCTTGGGACTGTTACTGAACTCTCTTCTGTGTCTAATGGAGGTATACCAGAAACAAGTGCGGAGATGAGCAAACAGCAATACAATGGAGAAATGGTTTCTGGTCATTGTGTTGTGGAGGGTTGAAGCTTAAAATATTAAATTATTAGAATGGAAGATAAGATCCAAGCAATGAAAGCCATTTATTAGTGTTAGGAACCTTGAGGATTCCAACTGTTTTTCTTTGTTGGGTGTCACTCAATTAGGAAGGCAAAATATAGGATGTGATGGTTCTCAAAGCATGTCCATAATTTTTATCATTTTACTGATGAGGGTGTTCAACATCATTTATTTGTATTGTATTAGTATATTTGAGTTATCCCATTTGTCCGCGACATGGGACATGGATTTGGACTGGTTTGAGTTTATAATTATTATTATATATATTAAAG 1432 0.3953 MDLMNGPVSGVSNCYVFKSRLQEYAQKAGLPTPVYETIKDGPSHEPSFRSTVIVNEVRYDSLPGFFNRKAAEQSAAEVALVELAKSNIVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYQCKKDETPGRASVFSCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQSSASHASQNQVDHPQLTVLPCRKRTTESVAVPDENSNPPKPKKARFKRKSSKRKPSRDKIGQIHSENISNGENINHEEETHAIVNGESGAHEKKSETFTSEAMKSSKNGIPVNYHEKETLAGEDSFAVNSQDGIFENRKSAELYSKENNLGTVTELSSVSNGGIPETSAEMSKQQYNGEMVSGHCVVEG 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02537 359 PANTHER RIBONUCLEASE III 14 230 IPR011907 GO:0003723|GO:0004525|GO:0006364
Pste2g02537 359 MobiDBLite consensus disorder prediction 327 346 - -
Pste2g02537 359 FunFam Double-stranded RNA-binding protein 1 96 171 - -
Pste2g02537 359 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 16 85 IPR014720 -
Pste2g02537 359 FunFam double-stranded RNA-binding protein 1 14 90 - -
Pste2g02537 359 SUPERFAMILY dsRNA-binding domain-like 104 171 - -
Pste2g02537 359 Gene3D - 99 171 - -
Pste2g02537 359 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 102 171 IPR014720 -
Pste2g02537 359 MobiDBLite consensus disorder prediction 241 270 - -
Pste2g02537 359 Gene3D - 17 98 - -
Pste2g02537 359 Pfam Double-stranded RNA binding motif 18 80 IPR014720 -
Pste2g02537 359 Pfam Double-stranded RNA binding motif 104 167 IPR014720 -
Pste2g02537 359 SMART DRBM_3 17 84 IPR014720 -
Pste2g02537 359 SMART DRBM_3 103 170 IPR014720 -
Pste2g02537 359 CDD DSRM_AtDRB-like_rpt1 16 84 IPR044450 GO:0003725
Pste2g02537 359 SUPERFAMILY dsRNA-binding domain-like 17 85 - -
Pste2g02537 359 MobiDBLite consensus disorder prediction 197 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02537 Pste-Chr2 25644578 25648685 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02537 2 25644578 25648685 Pste2g02537 2 25644578 25648685 ECH