Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02332 CTTAGGTTACACTGCAAAGGCGGACAGAGAATTTTTCGCCAACATTTTCCGTCGTTCTCCGCCCTACATCGTCGACGCCGTCGCTGTTTTGTTTCCGCGCGATTTCCGAAGTTCCAATGGCTTCTTCTAAGAGACCAAATGTGGAGCCGAATGGGAAAGGGAAAGGGAAGCGCCAGAAATCTTCCAGCGCTTTTTCGCCGTCGGATGGGAGCGTTGTGTTTCGTTTGCTGTGTCCCGTTTCTAGAATCGGCAGTGTTATTGGCAAAGGTGGTGCTATCATATCACAAATTCGCCAAGAAAGCGGTGTCAAAGTCAAGATTGAAGAAGCAGTTCCTGGGTGTGATGAAAGGGTTATAACAATCTCAGGTTCAGATAAAGAGGTTGAAGAAGATACTTCTGGGCAGAGAAAGGAGGGTACTGGTGATGATGCTGGAAACGAGGGGAAGGAGGATGAAGAGGATAAGGATGCTGGCGATGGCGACGCTAATGAAGATAAAGAAGAAAAAAATGCTGTTCGCATCGAAGACTTGCAGAGCGAGAAGAGGAATCCAGCTATTCGAAAAGCTATATCACTAGTTTTTGAGAGGATAGTTGAGGGAGTGGATGAATCAACTGAAGATGATGAAGAAAGTAATAAATCTTCCTTTTCTTTTAGGCTGCTTATTCTTACTACTCAAGTTGGATGTGTTCTAGGAAAGGGTGGTAGTGTGATAAAGAGAATGTCAGCAGAGAGTGGTGCACAGATTCGCATTCTTCCTAAAGACAAACTTCCAGTATGTGCATCCACTTCCGATGAGATAGTTCAGATAACAGGCAGTGTAGAAGTTGTCAGGAAAGCTCTTCAATCTGTTTCTCAACAGCTTTTGGAAAATCCACCTCGGGATCATGAATCCCTGTCTGCTAATTTTACCGGGCTGTCGTCTCATTCATTTGGGCAATTCCCTCCACACAGCCGTTCTTTTGCTGCTCAAGGAGCACCTTTTGCTGTTGGGCCTCATGATGTTTCTGGTTTTCATTCTGCCCCTGCTTTGATTCCCAAGTTTCATGAAGCTGCCATCCATGGTCGCACAAGGCCTTTACAGGAGATGCTTACTTTTCGTTTATTATGTCCTGTGGAGAGGGTGGGAAATATAATTGGTAAAGGTGGAGCAATCATAAAGACTGTGCAGCAAGAAACAGCAAGTGAAATCAAGGTTTTAGAAGCTCCTCCAGATTCTGAGGATTGTGTTATTGTTATATCTGGTCCAGCGCACCCAGAAGATAGAGTATCCCCTGTTCAAGAGGCTGTATTTCGCGTGCAAACTAGAATAGCCAAGCCTGTACCTGATGCCAAAGAGCATACTATGTTAGCAAGATTTCTTGTTTCATCCAATCAAATAGGCTGTCTTCTTGGCAAGGGTGGTTCCATCATAACTGAAATGAGAAAGAAATCAGGTGCCCATATCCGAATATTAGGAAAAGATAAGGTTCCAAAGTGTGCTTCAGAAGATGAAGAAGTAATTCAGGTAAATGGAGAAATTGAGGCAGTGCATGATGCTCTTTTGCAAATAACCACTAGATTAAAACATCATTTCTTTCGTGATTCATATCCATCTGTCAATTATCCTTCAAATGCTCCATTTCTGGATCAACTTTCTCCGTTCCCACCTTATTTAGGAAGGCGGGGACTTTCACCTCCTGGGATGTATTCTGAAATTGGTCCTCCACCTCCTCATGCTGGTTTTCCTCTTGATGATCGCCCTCCTTTTTTGAATAATATACATAGACCAGGCATTCCTCCTCACATATCTGAAAGGAAACCATGGGGTCCTCAGGGTGTGCTTGAAGGTGGTGCTCCCATTGGTTTGCCGGACATTCCAGGAGGTCCTCCTAGAAGAATTTCAGGATTTGCAGGGTGTGTCTATTGCAGTATAGCTGTCAATGATTTTGGGCAACCTATTATCACAAGTACCACTGTGGAAGTTGTTGTTCCTCGAGCACTGGTACCTGTAATATATGGGGAAGATGGTGAATGCCTGAAACAAATACTTCAGATATCTGATGCAAATATTACTATCACTGATCCAAAGCCTGGAGCTGTGGAAACTAAAATTATAATATCTGGAACCCCTGAGCAAACTCATGCTGCCCAAAGTCTCATTCAGGCATTTGTCATGAGTGAGAGGGAGTCTGGTTGATCTCTCTATTTGGAACGGTTGTTGGACATTTCTATTGGACTTGATTGACATAGAACCTGAGACAGTTGAGAAATGGAGTTGCTAGATGACAGTCTCCTTTCTGATTTAAACTGCCTAGTTCTACATGGATTGATCTCGCCATCTGAAGGTTAGATTGTTTTCCAGAATCACGGTTAGAGATAGTTGTTGATTGCAACTTCATCATTATACTTGTACCATTACAGGATTTCATGACCAGCTAGCGAATATGAATTCCGTCTCTTGCCCGGAATTTTCGTTTTGCTATTTAAATGCATTTGATGCGGACACAAGCTTAGTGCATGCTCCACTGAATCAAGTGGGTATGTATATATTGTGCATGTACTGTAGATGACAACATTAAATGATAGTACTGCCTTTTCATAC 2582 0.4311 MASSKRPNVEPNGKGKGKRQKSSSAFSPSDGSVVFRLLCPVSRIGSVIGKGGAIISQIRQESGVKVKIEEAVPGCDERVITISGSDKEVEEDTSGQRKEGTGDDAGNEGKEDEEDKDAGDGDANEDKEEKNAVRIEDLQSEKRNPAIRKAISLVFERIVEGVDESTEDDEESNKSSFSFRLLILTTQVGCVLGKGGSVIKRMSAESGAQIRILPKDKLPVCASTSDEIVQITGSVEVVRKALQSVSQQLLENPPRDHESLSANFTGLSSHSFGQFPPHSRSFAAQGAPFAVGPHDVSGFHSAPALIPKFHEAAIHGRTRPLQEMLTFRLLCPVERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPEDRVSPVQEAVFRVQTRIAKPVPDAKEHTMLARFLVSSNQIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLKHHFFRDSYPSVNYPSNAPFLDQLSPFPPYLGRRGLSPPGMYSEIGPPPPHAGFPLDDRPPFLNNIHRPGIPPHISERKPWGPQGVLEGGAPIGLPDIPGGPPRRISGFAGCVYCSIAVNDFGQPIITSTTVEVVVPRALVPVIYGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVMSERESG 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02332 686 ProSiteProfiles Type-1 KH domain profile. 176 245 - -
Pste2g02332 686 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 27 89 IPR036612 GO:0003723
Pste2g02332 686 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 169 253 IPR036612 GO:0003723
Pste2g02332 686 Pfam KH domain 35 91 IPR004088 GO:0003723
Pste2g02332 686 Pfam KH domain 413 478 IPR004088 GO:0003723
Pste2g02332 686 Pfam KH domain 613 676 IPR004088 GO:0003723
Pste2g02332 686 Pfam KH domain 326 378 IPR004088 GO:0003723
Pste2g02332 686 Pfam KH domain 180 245 IPR004088 GO:0003723
Pste2g02332 686 MobiDBLite consensus disorder prediction 106 122 - -
Pste2g02332 686 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 323 409 IPR036612 GO:0003723
Pste2g02332 686 ProSiteProfiles Type-1 KH domain profile. 324 391 - -
Pste2g02332 686 Gene3D K Homology domain, type 1 610 683 IPR036612 GO:0003723
Pste2g02332 686 MobiDBLite consensus disorder prediction 123 138 - -
Pste2g02332 686 Gene3D K Homology domain, type 1 323 401 IPR036612 GO:0003723
Pste2g02332 686 ProSiteProfiles Type-1 KH domain profile. 409 478 - -
Pste2g02332 686 SMART kh_6 408 483 IPR004087 GO:0003676
Pste2g02332 686 SMART kh_6 175 250 IPR004087 GO:0003676
Pste2g02332 686 SMART kh_6 610 680 IPR004087 GO:0003676
Pste2g02332 686 SMART kh_6 31 101 IPR004087 GO:0003676
Pste2g02332 686 SMART kh_6 323 399 IPR004087 GO:0003676
Pste2g02332 686 Gene3D K Homology domain, type 1 30 91 IPR036612 GO:0003723
Pste2g02332 686 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 406 491 IPR036612 GO:0003723
Pste2g02332 686 CDD KH-I_PEPPER_rpt1_like 325 392 - -
Pste2g02332 686 ProSiteProfiles Type-1 KH domain profile. 32 91 - -
Pste2g02332 686 CDD KH-I_PEPPER_rpt1_like 33 86 - -
Pste2g02332 686 CDD KH-I_PEPPER_rpt2_like 411 482 - -
Pste2g02332 686 MobiDBLite consensus disorder prediction 79 138 - -
Pste2g02332 686 Gene3D K Homology domain, type 1 407 485 IPR036612 GO:0003723
Pste2g02332 686 Gene3D K Homology domain, type 1 174 254 IPR036612 GO:0003723
Pste2g02332 686 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 324 675 - -
Pste2g02332 686 MobiDBLite consensus disorder prediction 81 105 - -
Pste2g02332 686 ProSiteProfiles Type-1 KH domain profile. 611 675 - -
Pste2g02332 686 MobiDBLite consensus disorder prediction 1 30 - -
Pste2g02332 686 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 611 680 IPR036612 GO:0003723
Pste2g02332 686 CDD KH-I_PEPPER_rpt2_like 178 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02332 Pste-Chr2 23340436 23347278 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02332 2 23340436 23347278 Pste2g02332 2 23340436 23347278 ECH