Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02223 AAAAGCTGAAAATTCAGGGTTAGCACGCAAGGGAAACGTAAAACCTTGGGGGAACTCTCTCATGAAAACACGCCATTGATGCTCTAATTCGAATTCTATCACAGACCCTTTTCGTCCTTCCTCTCAAAGTTTCGTTCTTTCGGCCCCCAATTGACATATTCAGTGCAGAATTTCCCCTTTGGCTGATAATTATTATATGCACATGCATGCCCTATTTTGGTTTTTGTTTTAGGTTTGCCAATGGAGGGCAAATTCTTGGATTCTCAGAATCAGGTGCAAGTTGAGGAAAGTTTATCTGCAAGAGTTTCTAGTTTCTCCCTTGGCGACCAGATATCCAATTCCGATGCTCTTCTGGATGTTCAGGTGGATGGTAGGAGGAGGAATGGTGTTACTAAAGAAGAATATTGTGATTCTTTTTCCACTGATAGCACTGAAGGGCATTGTATAAATTCTTTTAGATCATATCCAGAATTACCAGAAAAACCATTGCAAAAGAATAAAGAGGACATGGAGTCTTCAGATAATCTTCAGAAGCATGGAAGGTACTTCTATTATGATACTCCACTGCATGAAGATACTGGAGTTTGGATACCAGTTTCAGTTCCACCTATGTTGGAAGATGATCACAAAGAGTGGACCAAAGGTTTTCACTCAAATGGTGGCTATTTTCCTGATGATGACATGGGATGGAATCAATATGTTGGAGATGAAAGGGAATTGACTATGTGGGATGTGCTAGTAGAAATGTTACTTGTAGCTCGCGGAAAAGTGACTTCTTTGGCATCAGGAGATATTTATATGTCTAATTTTTCATGGATATCCAGCCATGTGCTTGAACAAGCTTGGAAAGAGATGGCCCAAACTCTAACAGAGGCCAACTTTGGTAATGTGAAGGAACTACTGGAAGCAGAGCCTCCAAAATGGTTAGCAGATAGTGCTGCTGCTTCTTGTATGCTTTGTGGTGTGAGGTTTCATCCCATCATGTGTTCCAGGCATCACTGCCGGTTTTGTGGAGGAATATTTTGTGGTGAGTGCTCCAAAGGGCGGAGTTTGTTGCCCTCAAAATTCCGAGTTTCTGACCCCCAAAGAGTATGTGATGTATGCTGTGTCCGACTTGAGTCTGTACAGCCTTATTTGATGAATCATGTAAGCAATGCTGCTCAGTTGCCAACCCATGACCTGACAGATCTGAGCACTGTGAGATCCTGGATTAATTTTCCTTGGGGACAGTCCATGGAATATGAAATTTACAAGGCAACTAACACCATTAAGGCTTATAATCAGATAGGTTTTTTAAAGCCTGAGAAGTCAATTCCAGATGTCATTTTAAGACAAGCAAAAGGCCTTGCAATTATCACGGTGGTCAAAGTAGGAGTTATGGTTACATATAATATTGGAACAGGACTTGTGGTTGCACGTAGGGAAGATGGTTCTTGGTCTCCTCCATCTGCTGTTTCCACCTTTGGTGTAGGGTGGGGGCCTCAGGCTGGAGGAGAGTTGACAGATTTCATTATTGTTTTGAGAACAAATGATGCTGTCAAGACATTTAGTGGCAATATGCATATTTCACTTGGAGCTGGTTTGAGTGCTGCAGTAGGCATTGTTGGTAGGTCAGTTGAAGCTGATGTTCGAGCTGGTGATGGTGGCTTTGCTGCCTGTTATACTTATAGCTGCTGTAAAGGTGCATTTGTTGGATGTTCACTTGAAGGAAGCACGGTGACTACTCGCACGCAAGAAAATTCCCGTTTCTATGGCAGCCAATCTATAACTGCAACAGATATACTTCTTGGCTCGTTGCCTAGGCCACCTGCTGCTGCCATTCTCTACCGCTCTCTTGCTGATCTGTATTCCAAGCTTGACGGATAATTCAATACTTCTGCATCATTCCTTTCTACTTTTTGGCTTTGCCATTAAGGACATAATTTGTACAGCTGCTAAGTCACACTCATTGTAAATCAATCCTGTCATTATTTGTCTTGTAAATATTTATGTAAAAGTTTGATATTATAAACCCCACGATTACCCTTGGTGACTATTTCGATACAATTGCCTTTCATGCTTTTTTGAATCTCCACTATTAATAACCATAAAAGGA 2095 0.4148 MEGKFLDSQNQVQVEESLSARVSSFSLGDQISNSDALLDVQVDGRRRNGVTKEEYCDSFSTDSTEGHCINSFRSYPELPEKPLQKNKEDMESSDNLQKHGRYFYYDTPLHEDTGVWIPVSVPPMLEDDHKEWTKGFHSNGGYFPDDDMGWNQYVGDERELTMWDVLVEMLLVARGKVTSLASGDIYMSNFSWISSHVLEQAWKEMAQTLTEANFGNVKELLEAEPPKWLADSAAASCMLCGVRFHPIMCSRHHCRFCGGIFCGECSKGRSLLPSKFRVSDPQRVCDVCCVRLESVQPYLMNHVSNAAQLPTHDLTDLSTVRSWINFPWGQSMEYEIYKATNTIKAYNQIGFLKPEKSIPDVILRQAKGLAIITVVKVGVMVTYNIGTGLVVARREDGSWSPPSAVSTFGVGWGPQAGGELTDFIIVLRTNDAVKTFSGNMHISLGAGLSAAVGIVGRSVEADVRAGDGGFAACYTYSCCKGAFVGCSLEGSTVTTRTQENSRFYGSQSITATDILLGSLPRPPAAAILYRSLADLYSKLDG 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02223 541 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 217 304 IPR013083 -
Pste2g02223 541 Pfam Las17-binding protein actin regulator 409 533 IPR007461 -
Pste2g02223 541 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 231 293 IPR017455 -
Pste2g02223 541 SMART fyve_4 223 294 IPR000306 GO:0046872
Pste2g02223 541 PANTHER SH3YL1 PROTEIN 191 539 - -
Pste2g02223 541 Pfam FYVE zinc finger 227 292 IPR000306 GO:0046872
Pste2g02223 541 SUPERFAMILY FYVE/PHD zinc finger 226 306 IPR011011 -
Pste2g02223 541 CDD SYLF_FYVE 334 535 - -
Pste2g02223 541 FunFam Zinc finger family protein 217 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02223 Pste-Chr2 22249254 22255469 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02223 228 311 EF-hand Containing Proteins AT3G14270 34.831 1.39e-07 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02223 2 22249254 22255469 Pste2g02223 2 22249254 22255469 ECH