Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02165 GAAAAATATTAATAAGGGAAAGAAACGCGGGTGCCACCTGTGCTAGTTCTTGGTGGGTCCAATGTTCGTTCTAGGGTTTGCAGAGTTCCGTTTTACTACTTTTCATTTCCGATCTATTATTCTCCTTTCTTTCCTCTCGCGAAATCAAATCCACAGATATCAATCATCAGATTCGTGAGATAAAGTTGTGCATATTCACCATGCAGGCATCGCGGGCAAGGCTGTTCAAGGAGTACAAAGAGGTGCAGCGGGAAAAGGTAGTTGATCCTGATATTCAGCTAGTCTGTGATGATTCTAACATTTTTAAATGGACGGCTCTTATCAAGGGACCCTCTGAAACTCCTTTTGAAGGGGGTGTGTTCCAGCTTGCTTTTTCTGTTCCAGAACAGTACCCTCTACAGCCGCCTCAAGTCCGGTTTTTGACTAAGATATTTCACCCAAATGTGCATTTTAAGCAACAAAGACATGGAGAACAGCTGAATAGTGAGGCTGAGGTTAGGAATTGTAATTCAGAAGGCAGAGAATCCCATAGAATTTTGAACATCCTAGATGAACTTCCAAATGTCACAATCCCAATTCCAAGCCCCAGTTCATTGTATAATTCTTTTGTATGGGAAATGAATGGGATTATACATCCTGGTAGCAGCCCTGCTATGCCTGTTCTTTACAAGTTGATGGATAATGTTTTTCTCATAGTTCTTGACATTTCTTCATGGCAATTCTTTAAACATCTAGTAATTTTCCAGACTGGGGAGATTTGCTTAGATATCTTGAAAAATGCTTGGAGCCCGGCTTGGACACTTCAATCTGTTTGTAGGGCTATAATTGCATTGATGGCCCATCCGGAACCAGACAGCCCACTGAATTGTGATTCAGGCAATCTTCTGCGTTCAGGCGATGTTAGAGGGTATCAATCCATGGCAAGAATGTACACAAGACTTGCAGCAATGCCAAAGAAAGGCTGAATGATTTTAGATGACTTGTTTCCTATGTTTGTCTAGGCAACAAGTTAGCAATAGATACAGCAGTTCTTTGTTATTAATTGTTTGAAATGTATACATTTTAAGACATGACATTAATTGTTTGATGATATGTTTAAAGTAGTGACTTGTACAATGTACAGAGTGTAGGTGTGACGTTGCATATCTGGATTTATGCTAGAATTGAATTCAACATATTCAAATAATCCTTGATTGCTTCAGTTTGATGAAAGCC 1215 0.3975 MQASRARLFKEYKEVQREKVVDPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKQQRHGEQLNSEAEVRNCNSEGRESHRILNILDELPNVTIPIPSPSSLYNSFVWEMNGIIHPGSSPAMPVLYKLMDNVFLIVLDISSWQFFKHLVIFQTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02165 254 Pfam Ubiquitin-conjugating enzyme 118 244 IPR000608 -
Pste2g02165 254 Pfam Ubiquitin-conjugating enzyme 7 83 IPR000608 -
Pste2g02165 254 SUPERFAMILY UBC-like 175 250 IPR016135 -
Pste2g02165 254 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 2 84 - -
Pste2g02165 254 CDD UBCc 7 245 IPR000608 -
Pste2g02165 254 SUPERFAMILY UBC-like 4 84 IPR016135 -
Pste2g02165 254 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 3 250 IPR000608 -
Pste2g02165 254 Gene3D Ubiquitin Conjugating Enzyme 1 249 IPR016135 -
Pste2g02165 254 SMART ubc_7 6 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02165 Pste-Chr2 21656783 21660732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02165 7 85 Miscellaneous Gene Families AT3G17000 35.443 1.09e-08 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02165 2 21656783 21660732 Pste2g02165 2 21656783 21660732 ECH