Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02089 AGGACATATAAAAATTCATTTTTGTGTCTGTGAGACTAATGGGGGCGTATAGAACTGATGAGGATTACGATTATCTGTTCAAGGTGGTGCTGATTGGAGACTCTGGTGTGGGAAAATCCAACCTTTTATCGAGGTTCACCAAGAACGAATTCAGCCTCGAATCAAAGTCCACCATTGGGGTTGAGTTTGCCACCAGAAGCATTAGGGTGGATGATAAGGTTGTCAAGGCTCAGATTTGGGACACTGCTGGCCAGGAAAGGTACCGAGCAATCACTAGTGCATATTATCGAGGAGCTGTTGGTGCTTTGTTAGTCTATGATGTTTCCCGCCATGTTACATTTGAAAACGTGGAGAGATGGTTGAAGGAGCTCAGAGGTCACACAGATGCCAACGTTGTGGTTATGATTGTTGGCAACAAAGCAGACTTGCGACATTTGCGAGCAGTTTCCACAGAAGATGCTACCACTTTTGCAGAACGGGAGAAAACATATTTCATGGAAACATCTGCCCTTGAGTCCATGAACGTTGAAAATGCCTTCACAGAAGTGCTGACACAGATCTATAATGTTGTAAGCAAGAAAGCCCTTGAAATTGGTGATGATCCAGCTGCATTACCTAAAGGACAGACGATAAATGTTGGGTCTCGTGATGATGTATCTGCTGTTAAGCAAAGTGGATGCTGTTCTGCTTGAGCATGGAGTAAAAACATCTGTATTTTTACTTTAAACCTATGTCCTGTTTATATCCATGTAGATTTCTGCCTTCAAGCGTGAAAATGATTGTCTATAGGGAGCATTACAATCTCTCAACTTTCTGCCTTTGGTATCTAGAGAAATCTGTTCAATGCAAGTCAAATGTTTAGGAAAGC 868 0.4228 MGAYRTDEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRGHTDANVVVMIVGNKADLRHLRAVSTEDATTFAEREKTYFMETSALESMNVENAFTEVLTQIYNVVSKKALEIGDDPAALPKGQTINVGSRDDVSAVKQSGCCSA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02089 217 ProSiteProfiles small GTPase Rho family profile. 7 178 - -
Pste2g02089 217 NCBIfam small GTP-binding protein domain 12 170 IPR005225 GO:0005525
Pste2g02089 217 ProSiteProfiles small GTPase Rab1 family profile. 9 215 - -
Pste2g02089 217 PANTHER DRAB11-RELATED 7 201 - -
Pste2g02089 217 SMART ras_sub_4 11 177 - -
Pste2g02089 217 SMART rho_sub_3 16 177 IPR001806 GO:0003924|GO:0005525
Pste2g02089 217 SMART ran_sub_2 19 214 - -
Pste2g02089 217 PRINTS Transforming protein P21 ras signature 14 35 - -
Pste2g02089 217 PRINTS Transforming protein P21 ras signature 55 77 - -
Pste2g02089 217 PRINTS Transforming protein P21 ras signature 117 130 - -
Pste2g02089 217 PRINTS Transforming protein P21 ras signature 37 53 - -
Pste2g02089 217 PRINTS Transforming protein P21 ras signature 152 174 - -
Pste2g02089 217 Pfam Ras family 15 175 IPR001806 GO:0003924|GO:0005525
Pste2g02089 217 FunFam ras-related protein RABA1f 6 215 - -
Pste2g02089 217 Gene3D - 6 215 IPR027417 -
Pste2g02089 217 SMART rab_sub_5 14 177 - -
Pste2g02089 217 ProSiteProfiles small GTPase Ras family profile. 8 217 IPR001806 GO:0003924|GO:0005525
Pste2g02089 217 CDD Rab11_like 11 175 - -
Pste2g02089 217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 180 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02089 Pste-Chr2 21022699 21025218 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02089 2 21022699 21025218 Pste2g02089 2 21022699 21025218 ECH
Pste3g02678 3 19688470 19690320 Pste2g02089 2 21022699 21025218 ECH