Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01998 GAATAATGGTTCCAAAATTGGGTGGTGGAGTGGATGATGGAGAGACTGGGCGTGGAACTAGGCCCATCTGAACATCACCCTCCTTTTCAGGAGTGACTTTCTTTCAACTTGTTATGTTCTTCTGTATTTTGTTTCTTCATTTTGGAGTTTAGAGTCATGGGGTCTTCTATAACTGTGATAGCTCGTATGGATCCAGCAACCTTCTCTGTGGTGCAAATGAAAGGTTATCTGATAACTGCTCCTTGTAATCAAGGAGCAGAAAGAACTCCTCACTTTGACCTGGGAAAATCTAGTTTGGCATCTTTTGATTATCTTGGTGAACTTTCTCCTACTTCCAAGTTTTGGAAAGCTTTCTCAAGAGATTCTCTGTGGAAAACTCTAGTTCAAACTGGGCAAATCTCCTTTGGCATTTTGGAGTCTTTGATCGACTCCTGTTATCCTATCAGGCAAATCTCCTTTGCCGTCTTTCCAGTTTCAGTGGCCAAGACAACATTGCTAATAAACTGGCTTACTATCTGTGACAAGCATCAGTATCAATCAGACACATTTTGCATTGTACACAAATATCCTTTGAAGTCAGTATTAACGCATCTGTTGTGGATCACAATACCCCCAGGATTTCAATGTTTCTATTTGCTTGAGAAGTTGATGGATGCTCGTATTGATGATTTGGATTGGGAGACTTCTAGTGACAGCAGCAGCAGTGAGGATCAAGAGGATATTGATTTTCAATATGGTGGACAAGCTCGGAGCATATTATCAAGTTTACAGGAAAGTATTGGGAAGATTGATGATTTTCTCTCATTTGAGAGGGCATTCGTCCATGGGGATGTGGTATGCACCTCATCTGACCCATCCGGACAGATAGGGAGGGTCACAAGTGTTGATGTGTTAGTGGACTTGGAAAGTTCTCAAGGAAAGAAATTAAAAAATGTGAACTCCAAGAAAATAATGAAGATTCGCTCCATCTCAGAAGGTGATTATGTAATCAAGGGGCCATGGATTGGTCAGGTTCAAAGGGTAGTAGACAGAGTGATTATATTGTTTGATGATGGAACTAAATGTGAAGTCATCACCTTGGAAAAAGATAAGCTTTTACCACTGAGTCATAGTTTTCTTGAAGATTCACAGTACCCATACTATCCAGGGCAGAGAGTTAAGGTTAAGACCTCCGCAGCTTCTAAACCAGCTAGATGGCTGTGTGGCACCTGGAAAGACAATCATGATGAAGGAATTGTTTGTGCTGTAGAAGCAGGTTTGGTGTATGTTAATTGGCTTGCTTCTTTTCTTTTGGGTTCCAATCTGAATGTGAATGTTCCTCCATGCTGGCAAGATTCAAAAAACTTGACCTTGTTGTCCTGTTTTTCACATACAAACTGGCAACTAGGTGACTGGTGCATGCTCCCAGTTGGGGACCAAAAGGAACAGATTATTCATGATGCATCTACTTGTGATCCTTATAATGAGCATAGTATGGCTACAGGATGTAAGAGAAGAAATCTTAACTCTAACATAGGGGTATTATTTATAATTGAGAAGATAAAGACTAAAGTTGATGTTGTTTGGCAAAATGGTGAACAGGCTGTGGGGTTAGATCCACACAACTTAATCCCAGTGAATGTTATAAACACTCATGAATTTTGGCCCCAGCAATTTGTGCTTGAAAAAGGTGCTTCTGATGATCCCGTTAAGCCAAGCAGCAATCAAAGATGGGGTGTTGTTCTTTCTATGGATGCAAAAGAGCATACTGTAAAGGTGCAATGGAGAACTGTTCCTGCATCTGAGACAGATAATTTGGCTAGAGACACAATGACGGAAACTGTGAGTGCCTATGAACTTCTGGAGCACCCAGATTATTCCTGTTGTTATGGTGATATTGTGTTCAAGGCGGCTCAAAAACAGCTTGGTTACCTAGCTGATAAAGATAATGCAAAGTCAGTGACTGACATGAATATGGAGGCTCCTCTGTTAAACCAGGACCAAATCAGTTATCAGAATAAGTCTGTAGATAACAGTTACCTCTCCTGTATTGGCAATGTTACAGGTTTCATAGATGGTGACGTGGAGGTAAAATGGGCTACTGGTTTAACAACCAAGGTTGCACCTTATGAAATTTTTCGAATTGATAAACATGAAGGTTCAACTGCAACCCCTGTTCCTTATGAAGCAAATGCTGAGTTGTTGTCTCAAGAAATGATTGAACATGGAAGTCTACCTTCAGACCAGAATGGAAAGACCTTGTTAGATTGTAATGGCAGTAGAGATAATTGTGAAAACTATCCAGGGGAGAGTAGTTCCTCTTACCTTCCTCAAGCTGCCATTGAACTTTTCTCCATCATTAAGGCCACCATATTCAAAATACTTGGTGTAACATCACTTTCCGGAAAATTCTCCCCAGTCCCTACGTTTGAAGCGGAAAATAAATCTAATTGTCTAGATAAAGATTTGGACACTTCTGGCCCTGACACTGAATCACATCAAGTGAGCAAGTTGCAGTCTTCTGAAGACACAAATCCATGTTGTGAAGTTATTAGGAGTCAGGAGAGGAATGATTTTCCAGTTTCTTTAAACAACAGTTCAGATCAGTTGAAGCAGTTTGATGTAATTGATAATTGCTCAGACCACCACTTTTTTTATGAGGGGAAGGGATTGTCATTATCTCAGGTTAAAAGGGGTTGGGTAAAGAAGGTACAACAAGAATGGAGTATCCTGGAGAAACATCTCCCCGAAACTATTTATGTCCGTGTTTTTGAAGAAAGAATGGATCTCATGTGTGCTGCTATTGTCGGTGCATCTGGGACACCTTATCATGATGGGTTGTTTTTCTTTGACATACGATTCCCTCCAGAGTATCCCAGGGAACCCCCAATGGTGCATTACAATTCTGGTGGGCTACGATTAAATCCTAATTTGTATGAGTCAGGAAAAGTGTGTTTGAGTCTCCTAAATACGTGGACTGGTACAGCCACCGAAGTGTGGAACCCTGCAGCTTCCACAATTCTTCAAGTCCTTCTTTCTCTGCAGGCCCTTGTCCTTAATGATAAGCCTTATTTCAATGAGGCTGGATATGATCAACAAATTGGCAGAGCTGAAGGGGAGAGAAACTCAGCGAGTTACAATGAGAATGCTTTCCTTGTCACCTGCAAATCCATTTTGTATCTATTAAGAAAGCCTCCCAAGGCATTAGTGGAAGAACACTTTAGACAACGCTCCAAACATATACTTGCAGCTTGTAAGGCATATCTTGAAGGAGCTCCAATTGGATGTGCTTTTGGTGGTGAAAAAACTGAGCATGAAAATCAGCATGGAACTTCTTCTGGATTTAAAATTATGCTTGCTAAGCTCTTCCCCAAGCTAGTTGAGGCATTTTCTGACAAGGGAATTGATTGCAGCCAGTTTGCTGAGATGCTA 3411 0.4096 MGSSITVIARMDPATFSVVQMKGYLITAPCNQGAERTPHFDLGKSSLASFDYLGELSPTSKFWKAFSRDSLWKTLVQTGQISFGILESLIDSCYPIRQISFAVFPVSVAKTTLLINWLTICDKHQYQSDTFCIVHKYPLKSVLTHLLWITIPPGFQCFYLLEKLMDARIDDLDWETSSDSSSSEDQEDIDFQYGGQARSILSSLQESIGKIDDFLSFERAFVHGDVVCTSSDPSGQIGRVTSVDVLVDLESSQGKKLKNVNSKKIMKIRSISEGDYVIKGPWIGQVQRVVDRVIILFDDGTKCEVITLEKDKLLPLSHSFLEDSQYPYYPGQRVKVKTSAASKPARWLCGTWKDNHDEGIVCAVEAGLVYVNWLASFLLGSNLNVNVPPCWQDSKNLTLLSCFSHTNWQLGDWCMLPVGDQKEQIIHDASTCDPYNEHSMATGCKRRNLNSNIGVLFIIEKIKTKVDVVWQNGEQAVGLDPHNLIPVNVINTHEFWPQQFVLEKGASDDPVKPSSNQRWGVVLSMDAKEHTVKVQWRTVPASETDNLARDTMTETVSAYELLEHPDYSCCYGDIVFKAAQKQLGYLADKDNAKSVTDMNMEAPLLNQDQISYQNKSVDNSYLSCIGNVTGFIDGDVEVKWATGLTTKVAPYEIFRIDKHEGSTATPVPYEANAELLSQEMIEHGSLPSDQNGKTLLDCNGSRDNCENYPGESSSSYLPQAAIELFSIIKATIFKILGVTSLSGKFSPVPTFEAENKSNCLDKDLDTSGPDTESHQVSKLQSSEDTNPCCEVIRSQERNDFPVSLNNSSDQLKQFDVIDNCSDHHFFYEGKGLSLSQVKRGWVKKVQQEWSILEKHLPETIYVRVFEERMDLMCAAIVGASGTPYHDGLFFFDIRFPPEYPREPPMVHYNSGGLRLNPNLYESGKVCLSLLNTWTGTATEVWNPAASTILQVLLSLQALVLNDKPYFNEAGYDQQIGRAEGERNSASYNENAFLVTCKSILYLLRKPPKALVEEHFRQRSKHILAACKAYLEGAPIGCAFGGEKTEHENQHGTSSGFKIMLAKLFPKLVEAFSDKGIDCSQFAEML 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01998 1085 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 840 1000 IPR000608 -
Pste2g01998 1085 MobiDBLite consensus disorder prediction 759 785 - -
Pste2g01998 1085 FunFam Probable ubiquitin-conjugating enzyme E2 23 802 1075 - -
Pste2g01998 1085 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 173 1078 - -
Pste2g01998 1085 Gene3D Ubiquitin Conjugating Enzyme 803 1078 IPR016135 -
Pste2g01998 1085 CDD UBCc 842 995 IPR000608 -
Pste2g01998 1085 MobiDBLite consensus disorder prediction 770 785 - -
Pste2g01998 1085 Pfam Ubiquitin-conjugating enzyme 845 991 IPR000608 -
Pste2g01998 1085 SMART ubc_7 843 1000 - -
Pste2g01998 1085 SUPERFAMILY UBC-like 833 1007 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01998 Pste-Chr2 20139963 20146870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01998 185 1080 Miscellaneous Gene Families AT2G33770 48.401 0.0 844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01998 2 20139963 20146870 Pste2g01998 2 20139963 20146870 ECH