Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01944 ATGAAGGAAGTTAATGCCTCCTCTTTGTTGCCATTGCCCCAACGCGTGTTTTCTTCTTATTTTCTAACTCTTGACTTCACCCTCGCTTATTCTTCTTCGCTTTGCTTCTTAGATCAACAAGCTTTGAGCCTAGAGATTTGGCTCATACTTATAAACCAGTTTATGGAGTTGATGGGGGGTGCAAAGTTTAGTATGTGTTTTGTTGTTGTTGTTGTTTTGTTTGTGGGGTCAGTAGGTGGGATTGGTGTGAATTGGGGGACACAGTCAACACACCCTTTGTCACCATCCACGGTGGTGAAGATGCTGAAGGACAATGGCATTCAGAAGGTTAAGCTTTTTGATGCTGATCCTGGTATCTTGGATGCTCTCAAGAAGTCTGGGATACAGGTCATGGTGGGGATTCCAAATGACATGCTTTATTCCCTGGCTAACAGTGTTGAAGCAGCTGAAAAATGGGTTTCAAAGAATGTTTCCAAACATGTCTCTTCTGGAGGAGTGGATATCAGGTACGTCGCAGTGGGGAATGAACCATTCTTGTCAACATACAATGGCACCTACGAAGCCACAACACTTCCAGCACTCCAAAACATTCAGGCAGCTCTCACCAAGTCTGGTTTGAGCAACCGTGTGAAAGTCACAGTCCCCTTAAACGCAGACGTATACCAAAGCTCCTCAGAAAAGCCATCAGACGGTGGTTTCAGAGCAGACATCAACAACGTCATGGTGCAGATTGTCAAGTTCCTAAATGAAAATGGAGCTCCCTTCACAGTCAACATCTACCCTTTCATCAGCCTCTACTCAGACCCCAATTTCCCCACTGACTACGCCTTCTTTAATGGCTACCAGCCCGCCATAAACGACAATGGAAGAACCTACGATAATGTGTTTGATGCCAACCATGACACTCTGGTATGGGCACTGCAGAAAAATGGCTTTGGAAACTTGCCCATAATTGTGGGGGAAATTGGTTGGCCCACAGATGGGAACAAAAATGCAAACCTTCAATATGCACAACGTTTTAACCAAGGTTTCATGTCACGTTACGTGTCTGGAAAGGGTACCCCAATGAGGCCTGGTCCTATAGATGCTTATTTGTTTAGTCTCATAGACGAAGATAACAAAAGCATTCAGCCAGGGAACTTTGAGCGTCATTGGGGCATGTTTTACTTTGATGGGCAACCCAAATACCAACTTAACCTTGGTTCAGCACGTGGTAATGGGTTGGTAGGTGCTAGTGGCGTTGATCATTTGGATAAAAAGTGGTGTGTTTTGAAACCCTCTGCGAACCTTAATGATGACCAAGTGGCCCCTAGTGTGGCCTATGCTTGTCAAAATGCTGATTGCACTAGTCTTGGGTATGGAACTTCTTGTGGCAATTTAGATGTGCATGGTAACATTTCTTACGCGTTTAATAGCTACTACCAGAAAAATGACCAGATGGAGACTGCATGCAAATTCCCAGGCCTTTCCATGATCACTGACAAGGATCCTTCTGTTGGAGATTGCAAGTTCAGAATCATGATCCAGACAGATTCTGCAGGATTACATGGAAAACTTGGATATCTAACAACAATGCTCTGTCTTTTCCTTCTTTTGCTATTCTGTAATATTTGGTTTTGATTTGCTTGCTTTTTTACTTGTTTTTTTAATGAAGTAAACTGTGTAGCAAGCGTAAGAAAGAGAAAAAAAAAAAAAAACTCGTTCAATTGTTTATTACGCA 1720 0.4302 MKEVNASSLLPLPQRVFSSYFLTLDFTLAYSSSLCFLDQQALSLEIWLILINQFMELMGGAKFSMCFVVVVVLFVGSVGGIGVNWGTQSTHPLSPSTVVKMLKDNGIQKVKLFDADPGILDALKKSGIQVMVGIPNDMLYSLANSVEAAEKWVSKNVSKHVSSGGVDIRYVAVGNEPFLSTYNGTYEATTLPALQNIQAALTKSGLSNRVKVTVPLNADVYQSSSEKPSDGGFRADINNVMVQIVKFLNENGAPFTVNIYPFISLYSDPNFPTDYAFFNGYQPAINDNGRTYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGNKNANLQYAQRFNQGFMSRYVSGKGTPMRPGPIDAYLFSLIDEDNKSIQPGNFERHWGMFYFDGQPKYQLNLGSARGNGLVGASGVDHLDKKWCVLKPSANLNDDQVAPSVAYACQNADCTSLGYGTSCGNLDVHGNISYAFNSYYQKNDQMETACKFPGLSMITDKDPSVGDCKFRIMIQTDSAGLHGKLGYLTTMLCLFLLLLFCNIWF 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01944 539 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 70 493 IPR044965 GO:0004553|GO:0005975
Pste2g01944 539 ProSitePatterns Glycosyl hydrolases family 17 signature. 315 328 IPR000490 GO:0004553|GO:0005975
Pste2g01944 539 Gene3D Glycosidases 80 406 - -
Pste2g01944 539 FunFam Glucan endo-1,3-beta-glucosidase 8 416 513 - -
Pste2g01944 539 SMART X8_cls 420 504 IPR012946 -
Pste2g01944 539 Pfam X8 domain 420 490 IPR012946 -
Pste2g01944 539 Pfam Glycosyl hydrolases family 17 81 399 IPR000490 GO:0004553|GO:0005975
Pste2g01944 539 FunFam Glucan endo-1,3-beta-glucosidase 5 80 406 - -
Pste2g01944 539 SUPERFAMILY (Trans)glycosidases 81 399 IPR017853 -
Pste2g01944 539 Gene3D - 416 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01944 Pste-Chr2 19746489 19751537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01944 67 535 Glycoside Hydrolase AT4G31140 67.373 0.0 682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01944 2 19746489 19751537 Pste8g00748 8 3873255 3876431 PCT