Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01943 CTTGCATACATAAAAAACTCTCTCCTACTCAAGAAAACACAAGTGGCACACAAGAACTTAAAGTAGCTAGGAAAGGAAAGAAACAAAAAGTAAGTTCGGTTGAAGAAAAGAGAAAGCAAGGACTAAGGAGCCATGCAGCGATTGGCTGCCGCGAAGTTGATGAGCAAAATGGGTCGTCCAGCATGCGACGTCTTCATAAACCACCGTGGGATAGACACAAAGAAGAACGTTGCTGGGTTGTTGTACGATAATCTTACGAGGATGCGAGTGAGGTCATTCTTGGACAGCATGAACATGAAACCCGGTAACAGGCTCTTCCATCACATTGATAGAGCCATTCTAGATTGTAAGGTTGGTGTTGCTGTCTTCTCTCCTCGTTATTGTGACTCTTATTTCTGTCTCCACGAGCTCGCTCTTCTCATGGAGTCCAACAAAAGGGTCGTTCCTATTTTCTTTGATGTCAAACCGTCGCAGCTTATGGTCAAGGACAACGGTACCTGCCCTCGTAAGGAGCTTCGTAGGTTCAGTTTAGCTCTCGAAGACGCTAAAAACACCGTTGGATTGACGTTTGATTCTTTCAATGGGGACTGGTCGGAGTTGCTAAGGAATGCTTCCGATGCCGTCATCATGAACTTGCTCGAGGTAGAGGAAGAAAGGAACTACGCCAGCAAGCAACGTTGAATGCTTCAAGCTTCATGCATATTTATAACCACAATATAAATTCGTTCATTTTTTATTTTTTTTTGTTTATAATACGGGATATAATGAGATAGGCCATATGCTACCTTTAACATCACTCAATTCTGTGGCCTGAATTCACTTAATAATTGGTTTAGGCTTCAATTCATTTGTATCACTTTTTTTTTTCTTTTTTGAGAGGCAAATTGAAATTTATTGAACAATATATTATTATATATAGCATACCGAGTGCTATGATTAATTATTCAAC 949 0.4046 MQRLAAAKLMSKMGRPACDVFINHRGIDTKKNVAGLLYDNLTRMRVRSFLDSMNMKPGNRLFHHIDRAILDCKVGVAVFSPRYCDSYFCLHELALLMESNKRVVPIFFDVKPSQLMVKDNGTCPRKELRRFSLALEDAKNTVGLTFDSFNGDWSELLRNASDAVIMNLLEVEEERNYASKQR 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01943 182 SMART till_3 17 163 IPR000157 GO:0007165
Pste2g01943 182 PANTHER COP1-INTERACTING PROTEIN-RELATED 17 178 - -
Pste2g01943 182 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 143 IPR035897 -
Pste2g01943 182 Gene3D - 12 172 IPR035897 -
Pste2g01943 182 ProSiteProfiles TIR domain profile. 16 161 IPR000157 GO:0007165
Pste2g01943 182 Pfam TIR domain 20 112 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01943 Pste-Chr2 19733399 19734432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01943 10 147 Miscellaneous Gene Families AT1G57670 30.065 3.12e-17 76.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01943 2 19733399 19734432 Pste2g01943 2 19733399 19734432 ECH