Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01882 CGTCTTTCTTCTTCATTTCTCCGTCGAAGATCCTGTTAGGGTTTGCACTCTGCTCTCAGCGCCGCACACACATAGCACTCTCATTCACTTCTGCACAACATTCCCCCGTCAAGGTGCTTTTGTATACTTTATGCTTAATGATACTGGTCTGGAATGTCCAACAATCTGGTTTCAGAGCCGATACCAAGCATGCAGATGGCTCAATTGGAGCCCCTTATGAGCAAAGTTGATTCATCAGGGAGACACATGGAAATGGGGCTCTTGGGTCCTGTATCCAGTGATATCGTGTCACAGTCGCACAGAACCTCAAATGAACATGTTGGATTATTGAGAGCTGTGCCCGGTGAACCTAGGCCTCAGGGATTTCCCCTTTCAAGTGTGCAGAGTGGGCGGGTAGAAGCACAGGCAAATAATCAGGGAATGAATCAGATACTTTCCCCTAACAGACAGTCCATGCAAATGGGGATGCCTCTGAATAGCACTGGGCAGCAGCAGCAGCCAACAACTCCCAAGCGTAAGGCAGCAATGGAACTATCTTCCAGCGGTTCCTTTAACAAGCGGGTTGCACAAATGGGAAATAGGCCTTGGTTGCAGCAAGGACCTAATTCATCAAATAAAGGTTCTCTGCAGATGCAATCCCCATCAAATACCTCCAGGACTCAGCATTCAGTGGCTTCTACTAAGAGAAAAACGCATTCGGATAACACTTCCACTAAAGCAGGGACACCTCGGTCCATGAATTCTAAAACTCAGAATATGCAGACAAAGCCATCCTCCAAGGTTCAAAGTGAATCATCTGATAGTGTTAGGTCCAAGATGAGAGAGTCTCTAGCTGCTGCTCTGGCCTTGGTTTCCAAGCAAGGCAAAACTCAGCTCTCAAACAATAATACATCAAATGATGCTGCCAATACTCAGGGTAAATTAGAGAACAGCTCTCAATGTACTGGATCTGCAGCTGCTACCACTGATTCTTCACTGGACCAAAGGCAGGATATTTCTCAATCGATTAATTCCTCTTTTTCTGAGGCTGATACAATTGGCCATGTAGCAGGAGAGCACATGCAAAGTACTACATTTACTGAAGATTTTCCAGAGAAATACAAGGACTATGAAGCAGGATCCACAAATGCATCAAACAATGAAAGCATACTGAGTTCTATGCAAGTTTTGAACTGTGATAAGCAAGATTTCCAGTCAAGTTACACATTAACTACTGATGATGTTCCTTTCAGTGATAGTTTCTTTATGAAAGATGATCTTTTGCAGGGAAATGGTCTTTCGTGGGTATTATCTGATATGGTGGATGTGGGAAATCAAAGGGAAAGTCAAACTAATATAGAGCAGAGATCAGAACCTGAGGAAACAGGTGGAGGCTGTAGGGAGGAGGCCCCTTTGCCTGAACTTTTGGCATCAAGAATAGAAGCAGAACTCTTTAAACTGTTTGGAGGTGTCAATAAGAAGTACAAAGAGAAAGGGAGGTCTCTTTTATTCAATTTAAAAGATCGCAATAATCCTGAACTTAGAGAAAGGGTTATGTTTGGTGAAATTCCTGCAGAACAACTATGTTCCATGACTGCAGAGGAACTTGCTTCAAAGGAGCTCTCCCAGTGGAGGATAGCCAAGGCAGAGGAACTTGCTCAAATGGTGGTTTTACCTGATTTAGATGTTGATTTTAGACGTTTGGTCAAGAAGACACATAAAGGTGAATTTCAAGTGGAAGTTGAATATGAAGACAATGTCTCTGTAGGGGAGGTTTCAGGTGGCACAACCTCAGGTTCTCGAAGCCAAACAATGAAAAAGGATGTGGGAGGCTCTTCTCCTTCCGACCCTGATGTGAACACTGATATTCAGAAGGGAAATCTACAGAAGGATGAAACATTTTCCATTACCATTTCTTCCAGCGATGGGACGGATCCCATGCAAGGGCTTATGACAGACGATGCATTGAAGGACCCTGACTTTCTTCCACCAATTGTCTCTCTTGATGAATTCATGGAATCTCTTAATTCTGAACCACCATTTGAAAATCTACCAGTAGAATCTGGGAAAGGGACACCTCCCTCAGACAAGGATGATTCTGGGAGTGGATCTAAATTGAAACCTTCTGATTTAACTCCAAATGAGCAAGCTGATGTCACTACAGATAAGTCTGAGAAGTATCAAAGTGCTTGTCTAAATTCAAATTCTGAAAAGGAGAAAAAGGATAATGCTGAATCTGGGGCCATTTCCTCTAATACGAGATACAGTGGGAGTCAAGCTGGCATGAAGTCAACTGATGGTCATACCAAGGAAAGGTCAACTGATGATGTGAAGTCCGCTTCTAGTGATGCTGAGTGGAGAGGCAATCAGTTTCATGGGGAAGAGAGATATGGCAATAATAATAGTTATTTAAAGGATGCAGTCACCAAAGGTGACTGCCTCTGGGAGGGAATGCTTCAACCAAATATCTCTACGACTCAATCAGTCGTAGGCATCTTTAAGAGTGGTGAGAAAGCTACGGCTAAAGACTGGCCTGGGTTTCTTGAGATCAAGGGAAGGGTTCGACTTGATGCTTTCGAGAAATTTCTGCAAGATCTTCGAATGTCTAGAAGTCGTGCAATCATGGTTTCACATTTCGTTTCCAAAGAGCCGGATGAGCAATCTACTCTCCGTGAGGTGGCTGACTCGTACATTTTGGACGAGAGAGTTGGATTTGCCGAGCCTGCGCATGGAGTTGAACTTTACTTCTGCCCACCTCATAAGAAAACAGTTGAAATGCTCAGCAACATACTTCCAAAGGAACAAATTGAGGCAGTTATTTCTATTGATAATGGCCTAATTGGTATTATTGTATGGAGAAAAACTAATTTAACTTCGTCTATATCACCCACCACTTCATCACATCACAAACATAGCTCTAAAAGACAATTCTTCAGTAGGAGACAGCAAGATATAAATGTGAATGCCAATTCCACCCATAAAGCGGTGCCCTCTACGGGCCTTAAGAATACCGAAAATGATGATGATGATGATGTCCCTCCCGGATTTGGGCCACCAGTGGCTCGAGTTGAGGATGACTTGCCAGAGTTTAACTTCTCTGGCAGTTCAAACCCAACACAATTGAGCCAAAAACCAATGGGACTACCAAATATGGTTCCATTACACTCGGTTAACCCAGCCACACCTCGTCCTGTAGAACAAATGAGGCAACTTGTACACAAATATGGGCAAAACAAATCAAATGCGCCTTCGGTAAATTGGCAGGATAAATATGGGGGGACAATTCAACCGTGGAATGATGATGATGATGATATACCTGAATGGCAGCCCCAAAACTCTCAGAATCAGTTTATTCCTCATCATACAATGCACAACTATCATATTCGACCTCACATTTTGAATCAATCATTTCCGGTTTCACAACAGCCAATTATGACGCAACAATATCAGCAACCCCCAATGAATGTGACGCATGGCCAACGAAATCTCGACCCTCAATGGGTCCCTTCTCCCCAGCCTCAGGGTAGCAACCTACGGCAAAGAGGTGGACCACTGCCCTATGGAGCGCCTGCGCAAGGCACTACCTGGCCTCAACATGTGTCTAGAAATAGGGGTTATTAGTTGTGCCTTTCAGTATAAAGTTTAGTTCCCTTAATTTTTTTATGCCTTTCATATCTGTAGTATGTAAGCTTATTGTAAGGTGTCGAGCTATTTTTTTTTTCACTGTAGCATCAATACCTCGTAGATTAAGCAAATGACCATTTCTCCTGTTTTAGTTTGCAAACGTTAGGTGTTCCGTCGAATAAATACGAGGGACAAGACAATTTTGCATGCTTTACTTTTTACGTTAGTTTTAAATTTCC 3842 0.431 MSNNLVSEPIPSMQMAQLEPLMSKVDSSGRHMEMGLLGPVSSDIVSQSHRTSNEHVGLLRAVPGEPRPQGFPLSSVQSGRVEAQANNQGMNQILSPNRQSMQMGMPLNSTGQQQQPTTPKRKAAMELSSSGSFNKRVAQMGNRPWLQQGPNSSNKGSLQMQSPSNTSRTQHSVASTKRKTHSDNTSTKAGTPRSMNSKTQNMQTKPSSKVQSESSDSVRSKMRESLAAALALVSKQGKTQLSNNNTSNDAANTQGKLENSSQCTGSAAATTDSSLDQRQDISQSINSSFSEADTIGHVAGEHMQSTTFTEDFPEKYKDYEAGSTNASNNESILSSMQVLNCDKQDFQSSYTLTTDDVPFSDSFFMKDDLLQGNGLSWVLSDMVDVGNQRESQTNIEQRSEPEETGGGCREEAPLPELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGEIPAEQLCSMTAEELASKELSQWRIAKAEELAQMVVLPDLDVDFRRLVKKTHKGEFQVEVEYEDNVSVGEVSGGTTSGSRSQTMKKDVGGSSPSDPDVNTDIQKGNLQKDETFSITISSSDGTDPMQGLMTDDALKDPDFLPPIVSLDEFMESLNSEPPFENLPVESGKGTPPSDKDDSGSGSKLKPSDLTPNEQADVTTDKSEKYQSACLNSNSEKEKKDNAESGAISSNTRYSGSQAGMKSTDGHTKERSTDDVKSASSDAEWRGNQFHGEERYGNNNSYLKDAVTKGDCLWEGMLQPNISTTQSVVGIFKSGEKATAKDWPGFLEIKGRVRLDAFEKFLQDLRMSRSRAIMVSHFVSKEPDEQSTLREVADSYILDERVGFAEPAHGVELYFCPPHKKTVEMLSNILPKEQIEAVISIDNGLIGIIVWRKTNLTSSISPTTSSHHKHSSKRQFFSRRQQDINVNANSTHKAVPSTGLKNTENDDDDDVPPGFGPPVARVEDDLPEFNFSGSSNPTQLSQKPMGLPNMVPLHSVNPATPRPVEQMRQLVHKYGQNKSNAPSVNWQDKYGGTIQPWNDDDDDIPEWQPQNSQNQFIPHHTMHNYHIRPHILNQSFPVSQQPIMTQQYQQPPMNVTHGQRNLDPQWVPSPQPQGSNLRQRGGPLPYGAPAQGTTWPQHVSRNRGY 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01882 1148 Pfam Transcription factor S-II (TFIIS), central domain 400 494 IPR003618 GO:0006351
Pste2g01882 1148 MobiDBLite consensus disorder prediction 637 676 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 1095 1148 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 688 706 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 707 734 - -
Pste2g01882 1148 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 109 977 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 388 409 - -
Pste2g01882 1148 Pfam SPOC domain 754 894 IPR012921 -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 532 589 - -
Pste2g01882 1148 SMART mid_6 386 489 IPR003618 GO:0006351
Pste2g01882 1148 MobiDBLite consensus disorder prediction 972 986 - -
Pste2g01882 1148 CDD SPOC_TFIIS 756 894 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 237 281 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 100 127 - -
Pste2g01882 1148 ProSiteProfiles TFIIS central domain profile. 384 506 IPR003618 GO:0006351
Pste2g01882 1148 MobiDBLite consensus disorder prediction 929 944 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 144 173 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 1095 1121 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 618 744 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 143 222 - -
Pste2g01882 1148 Gene3D - 391 481 IPR036575 GO:0006351
Pste2g01882 1148 MobiDBLite consensus disorder prediction 929 986 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 531 598 - -
Pste2g01882 1148 MobiDBLite consensus disorder prediction 185 215 - -
Pste2g01882 1148 SUPERFAMILY Elongation factor TFIIS domain 2 415 482 IPR036575 GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01882 Pste-Chr2 19199833 19207984 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01882 2 19199833 19207984 Pste2g01882 2 19199833 19207984 ECH