Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01802 ATGTGGACTCTCTCCACTACTGCTGTCAGCTTGGCAATAATTAGGAAGTTTATCTCTCCTAGACCTGGCCAGGTGTACTGCATCTTCTCAGTTTGTGATCTGAGCATAAAGATGGAGCTGAGTGGTATAAAAGATGCATTTGATCGGGTAGCCAAGAAGCAAAAATTATCCTCTTCCAAGTCTCAAGAAGTTGTTGATCAGGTGGGGCGAGAAATTGAGCAGGCATTGGTAACAATTCAGTCACCACATGACCCGTCATCTCCTGTGGACCAGAAATCTGTTCTCGAAGAACTCAAGTTAAAGCTGAATGCTATTGGACCACTTCAACAGTTGGAAGGATCAAACAAGGAATTGAACGCAACTCTTACCAAGTATCAAAAACTCCTTGAAAAATTGTTAAACCCTGACATATCAAAGGCATACAGAAATGTGGACTTTGACACTCATATTGTCAATCAGATCATTGCAAACCACTTTTACCGTCTAGGTTTATTTGATCTTGGAGATAGCATCATAAATGAGGCTGGAGAGCCTGATGCAACTGCACTTAGATCTCAATTTTTGGAAATGCATCAGATTATTGGAGCTATGAGGGAGAGAAACCTTCAACCTGCTCTGACATGGGTCTCTGCTAATCGAGAGAGACTTGTCCAGATTGGTTCCAATCTTGAGCTTAAGATTCACACACTACAGTTTGTAGAGGTCTTGCAAAATGGAACCCGAGCTGATGCCTTAAAATATGCCCGAACTTATCTTGCTCCGTTTGCTTCCCTCAACAAGGATGAGTTCCCAAAGCTTATGGGTTGCCTCTTGTATGCAGGAAGGCTAGAGAGCTCCCCTTATTCTGAGTTGATGTCCCCAATTCATTGGGAGATGACAACTGAAGAGCTCACACGGCAGTTCTGCACTCTCTTGGGGCAATCATACCAGAACCCGCTGAGTGTTGCAGTTGCAGCCGGAGTTGAGGGGTTGCCTACACTGTTAAAGCTGGCAAATGTAATGGCTGCTAAGAAGCAGGAGTGGCAGGAAATGAAACAGTTGCCTGTGCCTGTAGAATTGGGTAAGGAATTTCAGTTCCATTCAATTTTTGTTTGCCCTGTGAGTAGGGATCAAGGAAGTGAAGAGAATCCTCCAATGCTGCTTCCGTGCTTACATGTCCTTTGCAAGCAATCAATTATGAAGTTATCAAAAAACAGCACCCGAACATTCAAATGTCCGTATTGTCCAGCCGAAGCTACAGTTGCACAGTGCAGACAGCTGCATTTCTGATGATGACCAACGAGTGAATAAAAATTGAAAGAACCTGTCTATAAAACCGGGAGCTCTGTCTATTCTACCGTTCTTGCTTTTCTCTGAACAATTATACAGGTGCTTCAGTGAGATCTTCCACCGTACTTGCTTTTATGTCTGAACAAAATTATACAGTTGCTTCCATGGTCTCACTGCTCCGACTACAAACTTGTATGTTGTACTGGCATACAGCCATGTATATGTACTATATGATTGCACTAGATATTTTGGTTTGTCTTTAGAAAATTGTATTTGTCTTTAGAAAATTGTATTTTACTCTGCTATCGAAATTAGGCAATTAGCTAGACAGCAGCCACTGCTTGGACAACGGTTGGTCATGTTTCTCAGCATGGAATCATTCAAAGCATTGGTTTATTAGCAATGGATTTCGTGACATAGAGCGGTCAGATACAGTAGCAATGATTTTTCAAGGCTGTATCTGCCCCTGCTGACCAAGAACCATTCTGCTGTAAATGAATTTAGATCGATACGTCCCTCCCATTTTATGGCTTAACATGTTTCTTTTCTTCTTTTTTTTTTTTGTGAAACGTTTTCCGG 1848 0.4205 MWTLSTTAVSLAIIRKFISPRPGQVYCIFSVCDLSIKMELSGIKDAFDRVAKKQKLSSSKSQEVVDQVGREIEQALVTIQSPHDPSSPVDQKSVLEELKLKLNAIGPLQQLEGSNKELNATLTKYQKLLEKLLNPDISKAYRNVDFDTHIVNQIIANHFYRLGLFDLGDSIINEAGEPDATALRSQFLEMHQIIGAMRERNLQPALTWVSANRERLVQIGSNLELKIHTLQFVEVLQNGTRADALKYARTYLAPFASLNKDEFPKLMGCLLYAGRLESSPYSELMSPIHWEMTTEELTRQFCTLLGQSYQNPLSVAVAAGVEGLPTLLKLANVMAAKKQEWQEMKQLPVPVELGKEFQFHSIFVCPVSRDQGSEENPPMLLPCLHVLCKQSIMKLSKNSTRTFKCPYCPAEATVAQCRQLHF 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01802 422 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 355 421 IPR013083 -
Pste2g01802 422 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 186 243 IPR006595 -
Pste2g01802 422 Pfam RING-type zinc-finger 365 406 IPR027370 -
Pste2g01802 422 SMART toby_final6 239 333 IPR013144 -
Pste2g01802 422 SMART ring_2 365 408 IPR001841 -
Pste2g01802 422 CDD dRING_Rmd5p-like 363 411 IPR037683 -
Pste2g01802 422 Coils Coil 108 131 - -
Pste2g01802 422 FunFam Regulator of gluconeogenesis Rmd5 357 421 - -
Pste2g01802 422 ProSiteProfiles Gid-type RING finger profile. 365 408 IPR044063 GO:0061630
Pste2g01802 422 PANTHER MACROPHAGE ERYTHROBLAST ATTACHER-RELATED 35 420 IPR045098 GO:0004842|GO:0043161
Pste2g01802 422 SMART ctlh 186 243 IPR006595 -
Pste2g01802 422 Pfam CTLH/CRA C-terminal to LisH motif domain 186 327 IPR024964 -
Pste2g01802 422 SUPERFAMILY RING/U-box 359 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01802 Pste-Chr2 18428336 18431424 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01802 2 18428336 18431424 Pste2g01802 2 18428336 18431424 ECH