Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01515 TCTCTCCCTTCGTGTATTATTGTTGGATTTTTGTGTTTTCATGGCCGTGTTAGTGCTCTGTTCCTCAACCATGTGTTGTAGCAGTTTGTCCTCATGTTGTGTTTTAAATGACGCCAATGTTTATGTTCTGAGCAATAATGGGTTCTTTGGAGGAACCCCATTTGTCAAAATGAAATCTTTGCCAAATGGGTCTTCGTTAATTCGGAAGAAACATGGAAAAAGACAATTGTGTCTTCGTGCCTTTGAGACAAGATGTGCCCATGATGTGGTTGATGTAAATGGCAAGAGCAAATGTAGAGCGTCTTCAGAAGAAGTCATTGGCGTTCTGAAGTCCATTTCGGATCCAAATTCTGCTCTTTCATACTTTAAGATGGTTTCCCAGTCGCCTAATCTTGTGCATACCCCTGAAACATTTAATTACATGCTTGAGTTCTTGAGGGTTCATGGGAGGATTGAGGATATGGTTTTTGTCTTTGATTTGATGCAAAAGAAAGTCATTAACAGGAACCCAAATACATACCTGACTATTTTTAAGGCTCTGTCGATTAAAGGTGGGATTCGACAAGCGCCATTTGCACTTGGAAAGATGAGGCAAGCTGGTTTTGTCTTGAATGAATTTTCCTATAATGGACTGATTTATTTCCTGCTCCAACCTGGCTTTTGTAAAGAGGCATTGAAGGTTTACAGAAGAATGATCTCTGAAGGTATGAAACCTAGCATGAAGACATACTCAGCGTTAATGGTAGCATTGGGGAGGAGAAGGGATACTGGAACCATTATGGATTTATTGGAAGAAATGAAAACTCTGGGTTTGAGACCAAATATCTACACATATACCATATGTATTAGAGTACTTGGGAGGGCAGGGAGAATCGATGATGCTTATGGGATTTTAAAGACCATGGATGATGAAGGATGTGGGCCTGATGTTGTCACTTATACTGTTCTAATTGATGCTCTTTGTGCCGCAGGGGAACTTGATAAGGCCAAGGAACTATATGCAAAGATGAGAGCTAGCAGTCACAAACCAGATCAGGTGACTTACATAACTTTAATGGGCAAGTTTGGTAACTACGGCGACGTGGATACAGTGAAAAGATTCTGGAGTGAGATGGAAGCTGACGGTTATGCTCCTGATGTGGTTACGTATACAATACTTGTAGAGGCTTTATGCAAGGCTGGGAAAGTTGATCAGGCATTTGATATGTTAGCTGTGATGAGACTGAATGGAATTTTTCCAAATCTTCATACTTACAACACATTGATCTCTGGACTTTTGAACCTCAGAAGATTAGATGAGGCATTAGAGCTTTTCAACAATATGGAATCTTCGGGTGTTGAACCTACTGCTTATTCATACGTTCTTTTCATTGACTATTATGGAAAGTTAGGTGATCCTGATAAAGCCCTTGATACCTTTGGAAAAATGAAAAAGAGAGGCATTATGCCTAGTATAGCAGCATGTAATGCATCTTTATATAGTCTTGCCGAAATCGGCAGGATCGGAGAGGCAAAAGATATATTCAATGACCTTCACAATTGTGGGCTTTCACCAGACTCGATAACCTATAACATGATGATGAAGTGCTACAGCAAAGCAGGGCAAATAGACAAAGCCACTAAACTTCTGACTGAGATGTTAGGTGAAGGGTGTGAACCAGATATCATTGTAGTTAATTCTTTAATTGACACACTTTACAAGGCTGACCGAGTTGATGAGGCGTGGAAAATGTTTGGGAGACTGAAGGATTTGAAGCTAGCTCCTACAGTTGTGACGTACAACATTTTACTTACAGGTTTAGGGAAAGAGGGAAAACTCTTGAAGGCCCTTGATTTGTTTGGTAGTATGAAAGAGTCTGGATGTCCTCCAAACACGGTAACTTTTAATGCACTCCTTGATTGTCTTTGCAAGAATGATGCTGTAGATTTGGCCTTGAAAATGTTCTATAGAATGACAATTATGAACTGTAGACCTGATGTTCTAACTTATAACACTATCATCTATGGCTTGCTCAAAGAAGGTAGAGTTGGTTATGCATTCTGGTTTTACCATCAAATGAAGAAATTTCTCTACCCTGATCATGTAACTTTGTACACCCTCCTTCCTGGTGTTGTAAAGCATGGAAGGGTTGAGGATGCCATCAAGATTGTCATGGAATTTGTACATCAGTCAGATTTACAGACAGGCAATCAATTCTGGGGAGAGTTAATGGAATGTATTTTGATTGAAGCAGAAATAGAAGAGGCCACTTCATTTGCTGAAGGATTGGTGTGCAACTCTATTTGCCAAGATGATAATTTGATATTACCTCTTATTAGAGTCCTGTGCAAGCGGAACAAAGCTCTTAATGCTCAAAATTTGTTTGACAAATTCACTAAAACTTTGGGAATTCACCCTACCCCAGAATCATATAACTGCTTGATGGATGGGCTTCTTGGAAGAAATATCACGGAAGCAGCTTTGAAACTTTTTATTGAAATGAAGAATGCAGGTTGTTGCCCAAATATTTTCACCTACAACCTGTTGCTTGACGCTCATGGCAAATCTAGGAGGATTGATGAACTTTTTGAACTGTACAATGAGATGCTTTGTAGGGGATGCAAGCCCAATATTATAACCCATAATATTATCATCTCTGCCCTTGTAAAATCTAATAGCATAAACAAGGCATTAGATTTATATTATGAAATCATAAGTGGTGATTTCTTTCCCACTCCTTGTACATATGGCCCTCTGATAGACGGCCTTTTAAAGGCTGGAAGACCGGAGGAAGCAATGAAGATTTTCGAGGAGATGTCAGACTATCAATGCAAGCCCAACTGTGCTATTTATAATATTCTCATCAATGGATTTGGAAAAGCAGGCAACATTGATATTGCATGTGATTTGTTCAAAAGGATGGCAAAAGAAGGGATAAGGCCAGACTTGAAGTCTTATACCATTCTTGTAGAATGTTTATTCATGACTGGTAGAGTTGATGATGCTGTGCACTACTTTGAGGAACTAAAGTTAACTGGCCTTGATCCTGATACTGTTTCTTACAATCTTATGATCAATGGCCTTGCAAAATCACGTAGGTTGGAAAAAGCCCTTTCTCTTTTAAGTGAAATGAAGAATAGGGGAATTGCTCCTGATCTTTATACTTACAATGCATTGATTCTCCATTTTGGAAATGCTGGAATGGTGGACCAAGCTGGAAAGATGTTTGAAGAACTGCAACTTATGGGTCTTGAACCTAACGTCTTCACTTATAATGCTCTCATTCGTGGGCATAGTATGTCAGGAAACAAAGATCGAGCCTTTTCTGTCTTCAAAAAGATGATGGTTGTGGGGGATAAGAGGAAACAATTTGCTCCGAGAAGTGCTGCTTTCTATCCACTTGGGTCACTTTTCCTTAGAAATGGCCTTGGAGTTTGGAGTTGCATACCAATCTTTCAACATGAACTTTCCTACTATATAGATGAGGCTTCGGGGTTGATAATAGAAGGGTGGTAATGGAGAAGGGAATAGGGATGGAAGTGTAATGTTGCTGGGAAAAGGGGGAAATAAGGAAATTGAGATGTGATCACATCGCATCAAGATGTAAACCAATGACGAAATGTGTAATACATAAGCATATCCCTTTCTAAAATGCAAG 3638 0.3944 MAVLVLCSSTMCCSSLSSCCVLNDANVYVLSNNGFFGGTPFVKMKSLPNGSSLIRKKHGKRQLCLRAFETRCAHDVVDVNGKSKCRASSEEVIGVLKSISDPNSALSYFKMVSQSPNLVHTPETFNYMLEFLRVHGRIEDMVFVFDLMQKKVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNEFSYNGLIYFLLQPGFCKEALKVYRRMISEGMKPSMKTYSALMVALGRRRDTGTIMDLLEEMKTLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMDDEGCGPDVVTYTVLIDALCAAGELDKAKELYAKMRASSHKPDQVTYITLMGKFGNYGDVDTVKRFWSEMEADGYAPDVVTYTILVEALCKAGKVDQAFDMLAVMRLNGIFPNLHTYNTLISGLLNLRRLDEALELFNNMESSGVEPTAYSYVLFIDYYGKLGDPDKALDTFGKMKKRGIMPSIAACNASLYSLAEIGRIGEAKDIFNDLHNCGLSPDSITYNMMMKCYSKAGQIDKATKLLTEMLGEGCEPDIIVVNSLIDTLYKADRVDEAWKMFGRLKDLKLAPTVVTYNILLTGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFYRMTIMNCRPDVLTYNTIIYGLLKEGRVGYAFWFYHQMKKFLYPDHVTLYTLLPGVVKHGRVEDAIKIVMEFVHQSDLQTGNQFWGELMECILIEAEIEEATSFAEGLVCNSICQDDNLILPLIRVLCKRNKALNAQNLFDKFTKTLGIHPTPESYNCLMDGLLGRNITEAALKLFIEMKNAGCCPNIFTYNLLLDAHGKSRRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFFPTPCTYGPLIDGLLKAGRPEEAMKIFEEMSDYQCKPNCAIYNILINGFGKAGNIDIACDLFKRMAKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLAKSRRLEKALSLLSEMKNRGIAPDLYTYNALILHFGNAGMVDQAGKMFEELQLMGLEPNVFTYNALIRGHSMSGNKDRAFSVFKKMMVVGDKRKQFAPRSAAFYPLGSLFLRNGLGVWSCIPIFQHELSYYIDEASGLIIEGW 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 471 505 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 506 540 IPR002885 -
Pste2g01515 1151 SUPERFAMILY TPR-like 402 533 IPR011990 GO:0005515
Pste2g01515 1151 Pfam PPR repeat family 365 413 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat family 575 624 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat family 295 340 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat family 926 973 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat family 505 542 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat family 821 870 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat family 645 691 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat family 996 1040 IPR002885 -
Pste2g01515 1151 Gene3D Tetratricopeptide repeat domain 245 356 IPR011990 GO:0005515
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 576 610 IPR002885 -
Pste2g01515 1151 Gene3D Tetratricopeptide repeat domain 746 875 IPR011990 GO:0005515
Pste2g01515 1151 Gene3D Tetratricopeptide repeat domain 1027 1121 IPR011990 GO:0005515
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1067 1101 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 997 1031 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat 545 571 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat 790 819 IPR002885 -
Pste2g01515 1151 Gene3D Tetratricopeptide repeat domain 430 499 IPR011990 GO:0005515
Pste2g01515 1151 Gene3D Tetratricopeptide repeat domain 882 954 IPR011990 GO:0005515
Pste2g01515 1151 Gene3D Tetratricopeptide repeat domain 357 429 IPR011990 GO:0005515
Pste2g01515 1151 Gene3D Tetratricopeptide repeat domain 570 639 IPR011990 GO:0005515
Pste2g01515 1151 Gene3D Tetratricopeptide repeat domain 640 710 IPR011990 GO:0005515
Pste2g01515 1151 Gene3D Tetratricopeptide repeat domain 955 1026 IPR011990 GO:0005515
Pste2g01515 1151 Gene3D Tetratricopeptide repeat domain 500 569 IPR011990 GO:0005515
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 787 821 IPR002885 -
Pste2g01515 1151 Gene3D Tetratricopeptide repeat domain 90 244 IPR011990 GO:0005515
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 927 961 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 892 926 IPR002885 -
Pste2g01515 1151 SUPERFAMILY HCP-like 873 1100 - -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 191 225 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 646 676 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 296 330 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 401 435 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 541 575 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 261 295 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 436 470 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 822 856 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 611 645 IPR002885 -
Pste2g01515 1151 SUPERFAMILY TPR-like 195 708 IPR011990 GO:0005515
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 366 400 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 438 471 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 333 367 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 508 542 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 930 962 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 263 297 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 298 331 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 649 675 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 894 928 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 965 998 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 403 436 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 1069 1096 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 1034 1068 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 790 823 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 193 226 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 368 401 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 544 576 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 859 892 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 999 1032 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 578 612 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 824 858 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 229 262 IPR002885 -
Pste2g01515 1151 NCBIfam pentatricopeptide repeat 613 647 IPR002885 -
Pste2g01515 1151 Pfam Pentatricopeptide repeat domain 424 477 IPR002885 -
Pste2g01515 1151 Pfam Pentatricopeptide repeat domain 182 239 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1032 1066 IPR002885 -
Pste2g01515 1151 PANTHER MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE 733 1098 - -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 331 365 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 962 996 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 226 260 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat 1062 1094 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat 257 288 IPR002885 -
Pste2g01515 1151 Pfam PPR repeat 889 920 IPR002885 -
Pste2g01515 1151 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 857 891 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01515 202 703 Glycosyltransferase AT1G05670 27.381 1.20e-62 226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01515 2 16309584 16315006 Pste2g01515 2 16309584 16315006 ECH