Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01443 GTTCGGGCGCAGAGAAGAGAAGGGATGATTTCCACAACGAGTTGGGACGAGAACGATGAATTTGAGATCCCTCTTACTCAAACGACAACAACTTTTCACGAGGTCACCTCTACGGATAACAATCAACGGCCATTGAAGAAACCTAAACGCAAAACGACGACGCTTCATAGCATTGGCAAGGAGAATAGGCAACCCAGCGAGGGTTGCGAAATTGAGAACTGCAGCTTGGATTTCATTCCTTCCACCATAGACTGTGTTGGCAGCGTTCGAAATTCGGAACAAGAGGACAGTGTTTCTTCTTCTTCTTCTTCTGCATCTTTGTCGGAGCTGGAAACGAAGGAGAATTATCTTCGCAACTCAATAGAGTCGAAGCTGGTGGTTTCGAGAGCCGGCGCACTCAACTGTGCGGATGCAGACTCCGATTCAGAGCTTGATTTGTTGATGAATTTATGCAATGAGTTAGAGGAAGTAGATAGTTCAGTTCCGTGTCCCCTGTGCGAGGTTGATATTTCGAACTTGACCGAGCAACAACGACATCTTCATACTAATAATTGTCTTGACAAAGGAGATGATGGTGTTGTTGTGATTCCTGAAGTCGAGAAGGCTGCTCAACACGGGCTAAAAGTTGCTTCTGTTGTTGATTGGCTACGATGTCTAGGTTTGGGGAAGTATGAAGATGTTTTCGTTAGGGAAGAAGTTGATTGGGACACCTTGCAATGGCTAACAGAAGAGGATCTCTTAAGCATGGGTATTATTGCACTTGGGCCCAGAAAAAAGATTGTGCATGCCCTGTCTGAACTTAGAGAAGGAGATGCCGCTACAAATGAGAAACACGAGGATGCTTTGCCAGAACCTAGAAGGATTAGAAGCCCGAAAGTCAAATTAAAACATGGCAAATCTGAAAGAAAAGTAGAAAGCACTTGTAAGCCAGTGGCAAACAAATTAATAACAGAATTTTTTCCAGGCTTTGCCCCAAAAGAAAAGAAGGTTTCTGCCTCTCCTCGAGAACAACGAGAAATAAAAAACAGTAGCTTGGATTCTGGTCGTAAGCAGAAATCAAAAAATGTGCCAACAAATAGAAAGCTCCGTGATGTTCCCAAATGGTGTGCTGTGCAAGGAACACCTTTCCGAGTGGATGCTTTCAAATACCTCCGAGGAGATTGTTCCCACTGGTTTCTCACACACTTCCACTTGGACCATTATCAAGGTCTCACAAAATCATTCAATCATGGAAAGATCTATTGCTCCTCCGTGACAGCTAGGCTTGTAAATATGAACATTGGAATTTCATATGATAAATTACATGTTTTGCCTCTGAACCAAAAGGTTGAAATAGCCGGTGTTGATGTGACTTGCATGGATGCCAACCATTGTCCAGGTTCCATAATCATACTTTTTCAACCTCCGAATGGTAAGGCGGTGCTTCACACGGGTGATTTCCGCTATACTGAAGAAATGGCAATGAATCCTTTACTGCAGATGTGTCCTATCAATACTCTAATTCTTGATACAACATACTGCAACTCACAGTATGACTTTCCTAAACAAGAAGCTGTAATACAATTTGTTATTGATGCTATTCAAGCGGAAACTTTTAACCCCAAGACTCTTTTTCTGATTGGCAGCTATACAATTGGAAAAGAAAGACTATTCTTGGAGGTTGCTCGTTCCCTTCGTAAAAAGGTTCACGTGACTGCAGCAAAGTTGCGTCTTCTAAAATGTTTGGAATTTAAGGAGGAGGATATGCAATGGTTTACTTCAAATGAACATGAAAGTAACATTCTATGTTGCCCTTTGTGGACGCTCGCAAGCTTTAAAAGATTGAAGCATGTATCAAGTCAATATAAGGGTCGCTACAATCTTATTGTTGCTTTCTCCCCCACGGGTTGGACGTTTGGCAAAGGTCAAAAGAAGTCTCCTGGAAGAAGATGGCAGCAGGGTACTATTATAAGGTACGAAGTGCCTTACAGTGAGCATAGCAGCTTTACAGAACTCAAAGAGTTTGTAAAACTTGTGTCTCCTGATAATATTATACCAAGCGTGAATAACGATGGACTAGAATCTTCTGATGCAATGATTTCTCTGTTGTTATCTTGATTAGTTCATCAAAAGGGGTTTAGGCTACCAGTGACATATACTGTATGATAAATTTTAAATAAAGGTTTAATGAGTTTTGCC 2178 0.4169 VRAQRREGMISTTSWDENDEFEIPLTQTTTTFHEVTSTDNNQRPLKKPKRKTTTLHSIGKENRQPSEGCEIENCSLDFIPSTIDCVGSVRNSEQEDSVSSSSSSASLSELETKENYLRNSIESKLVVSRAGALNCADADSDSELDLLMNLCNELEEVDSSVPCPLCEVDISNLTEQQRHLHTNNCLDKGDDGVVVIPEVEKAAQHGLKVASVVDWLRCLGLGKYEDVFVREEVDWDTLQWLTEEDLLSMGIIALGPRKKIVHALSELREGDAATNEKHEDALPEPRRIRSPKVKLKHGKSERKVESTCKPVANKLITEFFPGFAPKEKKVSASPREQREIKNSSLDSGRKQKSKNVPTNRKLRDVPKWCAVQGTPFRVDAFKYLRGDCSHWFLTHFHLDHYQGLTKSFNHGKIYCSSVTARLVNMNIGISYDKLHVLPLNQKVEIAGVDVTCMDANHCPGSIIILFQPPNGKAVLHTGDFRYTEEMAMNPLLQMCPINTLILDTTYCNSQYDFPKQEAVIQFVIDAIQAETFNPKTLFLIGSYTIGKERLFLEVARSLRKKVHVTAAKLRLLKCLEFKEEDMQWFTSNEHESNILCCPLWTLASFKRLKHVSSQYKGRYNLIVAFSPTGWTFGKGQKKSPGRRWQQGTIIRYEVPYSEHSSFTELKEFVKLVSPDNIIPSVNNDGLESSDAMISLLLS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01443 698 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 360 692 - -
Pste2g01443 698 MobiDBLite consensus disorder prediction 270 301 - -
Pste2g01443 698 CDD SAM_superfamily 211 266 - -
Pste2g01443 698 ProSiteProfiles SAM domain profile. 207 270 IPR001660 GO:0005515
Pste2g01443 698 MobiDBLite consensus disorder prediction 270 289 - -
Pste2g01443 698 SMART SAM_4 204 270 IPR001660 GO:0005515
Pste2g01443 698 Pfam Beta-lactamase superfamily domain 392 510 IPR001279 -
Pste2g01443 698 Pfam SAM domain (Sterile alpha motif) 209 268 IPR001660 GO:0005515
Pste2g01443 698 MobiDBLite consensus disorder prediction 92 112 - -
Pste2g01443 698 FunFam DNA ligase 6 371 531 - -
Pste2g01443 698 Pfam DNA repair metallo-beta-lactamase 580 684 IPR011084 -
Pste2g01443 698 MobiDBLite consensus disorder prediction 329 348 - -
Pste2g01443 698 SUPERFAMILY Metallo-hydrolase/oxidoreductase 376 680 IPR036866 -
Pste2g01443 698 MobiDBLite consensus disorder prediction 327 359 - -
Pste2g01443 698 FunFam DNA cross-link repair 1A protein 512 659 - -
Pste2g01443 698 CDD SNM1A-1C-like_MBL-fold 352 509 - -
Pste2g01443 698 Gene3D - 372 681 IPR036866 -
Pste2g01443 698 SUPERFAMILY SAM/Pointed domain 207 269 IPR013761 -
Pste2g01443 698 Gene3D - 512 659 - -
Pste2g01443 698 MobiDBLite consensus disorder prediction 34 66 - -
Pste2g01443 698 Gene3D - 209 280 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01443 Pste-Chr2 15685465 15696623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01443 210 264 Glycosyltransferase AT3G07170 50.909 1.84e-08 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01443 2 15685465 15696623 Pste2g01443 2 15685465 15696623 ECH