Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01415 TATGGCTTACATTGTTTGAAGGAAATATGATGCTTGTAAAGGGTGGTTTTAATTACAAGGAAGCTCTGACCAAGTCCCTTATCTTCCTAGAGGCACAACGTTCAGGAAAGCTCCCTCCAAATAATAGGGTACCTTGGAGAGGAGACTCAGCACTTGATGATGGAAAACTCGCTAATGTGGACCTTGTTGGGGGATACTATGATGCAGGAGACAATGTGAAATATGGTCTCCCCATGGCTTTCACCGTGACTACGCTAGCATGGGGTGCCATTTTTTACAAGTCAGAATATAAAGCTGCAAAGGAGTTGCATAATGTTGAAGACGCCATTCGTTGGGGTACAGATTATTTTCTGAAAGCTAGTTCTCGACACAAAAGATTATATGTGGAGGTAGGGGACCCGCAAGAGGATCACCATTGTTGGGCTCCGCCAGAAAATATGCATACAAAGAGAACGGTTAAGATGATCAGTAGTCACACGCCCGGGACTGAGATCGCAGCTGAAACTGCAGCTGCAATGGCCGCTGCTTCCATTGTTTTTAGGCCAAAAGATCGTAAATATGCTCGTCGTCTTCTCAATAAAGCTAAATTGCTTTTCCAAATGGCTAAATCGCATAAAGGAACCTATGATGGAGAATGTCCCTTCTACTGCTCTTATTCCGGCTACAATGACGAAATGATGTGGGCAGCAACATGGCTATACGTGGCTACGAGGAAGTCAATGTACATGAAGTACCTATTAGAAGACTGCATGAGTGCTAGTGTAACAGAATTCAGTTGGGACCTTAAATATGCTGGAGCTCAAATCATTCTCACCCAGTTGCATTTCGAAGGTGAAAAGAATTTGCAAACATTTAAAAACCATGCCGAAAGTTTCATATGCTCTGTCCTTCCGGAAAGTCCCTACCACCAGATTAATTTGACTCCTGGAGGGTTTATTCATTTGAGAGATGGAGCCAACACGCAATATGCTACGGGCACGTCTTTCTTGTTCGCTGTATATAGTGATTTGCTCAAAAAGTATAAAGCGAAAGTCAATTGTGGAGGCAAAAAATTTAGCTCCTCTGATCTTCTTGCTTTTGCTAAGCAACAGATGGATTACATACTAGGCAAAAATCCTGAAAGAAGATCGTATATGGTGGGATTTGGAAAGAACCCACCAACGCAAGCACACCATAGAGGTGCTTCGGTGCCCAAATTGAAAAAGGGTGAAGTGGTGGAATGTTCGTCAAGCTTCTCAAAATGGTTACAGAGAGATGCACCTAACCCGCATGAGCTAACCGGTGCCATTGTGGGTGGACCTGATGGCTCTGACTATTTCAACGATAAACGTACGGACTCACCTAAGACTGAACCATGCACCTACGTCAATTCCCTTGCATCTGGGGCTCTAGCCAAATTGGCATCTTTGGGT 1412 0.4391 MMLVKGGFNYKEALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLVGGYYDAGDNVKYGLPMAFTVTTLAWGAIFYKSEYKAAKELHNVEDAIRWGTDYFLKASSRHKRLYVEVGDPQEDHHCWAPPENMHTKRTVKMISSHTPGTEIAAETAAAMAAASIVFRPKDRKYARRLLNKAKLLFQMAKSHKGTYDGECPFYCSYSGYNDEMMWAATWLYVATRKSMYMKYLLEDCMSASVTEFSWDLKYAGAQIILTQLHFEGEKNLQTFKNHAESFICSVLPESPYHQINLTPGGFIHLRDGANTQYATGTSFLFAVYSDLLKKYKAKVNCGGKKFSSSDLLAFAKQQMDYILGKNPERRSYMVGFGKNPPTQAHHRGASVPKLKKGEVVECSSSFSKWLQRDAPNPHELTGAIVGGPDGSDYFNDKRTDSPKTEPCTYVNSLASGALAKLASLG 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01415 462 FunFam Endoglucanase 6 461 - -
Pste2g01415 462 SUPERFAMILY Six-hairpin glycosidases 7 460 IPR008928 GO:0005975
Pste2g01415 462 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 358 384 IPR018221 -
Pste2g01415 462 Gene3D - 5 462 IPR012341 GO:0005975
Pste2g01415 462 PANTHER ENDO-1,4-BETA-GLUCANASE 9 459 - -
Pste2g01415 462 Pfam Glycosyl hydrolase family 9 10 455 IPR001701 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01415 Pste-Chr2 15425597 15427674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01415 1 460 Glycoside Hydrolase AT3G43860 68.764 0.0 654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01415 2 15425597 15427674 Pste2g01415 2 15425597 15427674 ECH