Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01360 ATGGCAGCTCAGAAGTACCCTTCTCCCACATACATCATCCTCCTACTAATAACCGTCACACGTTTGATCTCCACAGTGGGGAAAACCTCCTCAAGGAAGACGGTCTCGTCGCGAGAACTGGTCTCAGTGTCCCGCGACGACACTGTCTTCCGTAACCTCCGCGAGGATGCGGAGGCTCTGGAGGGAGTCTCGAGGGACTACGGGAACATGGTGAGGGACGTCCCATTGGCGGTGTTCAACCCGACGTCGGTGCAGGACATCGGGAGGCTGATAAAGCTGTCGTACGACGGTTCTGTCCCTTTCAAGGTGGCGGCGAGGGGGCAGGGGCACTCGACGAGGGGACAGGCCATGGCACGTGAGGGGGTGGTGGTGGACATGGCGGGGTTCAGAGAGAGGGGTAATGGGGTGGGGATAAGGGTGTCCGATGTGGACCCTAATAATGGTTACTATGTTGATGTTGGAGGGGAACAGTTGTGGATCGATGTGCTACACGCCACGCTCAAGCATGGACTTGCACCTATGTCTTGGACCGATTACTTGTACTTGACGGTGGGAGGAACTCTCTCCAATGCCGGCATCAGTGGCCAAACATTCCGATACGGTCCTCAAATCTCCACTGTCCGTCAAATGGATGTTATAACTGGAAAAGGAGAATTTGTGACCTGCTCCCCGCAGACGAATTCGGAGTTGTTCCACGCCGCTCTTGGAGGATTAGGACAATTTGGAATTATAACAAGGGCAAGAATTGCTCTTGCGCCAGCTCCTGAGAGGGTTAAATGGGTTAGACTTTTGTACAACGACTTTTCTGCTTTTACCAAAGACCAGGAACAATTAATCTTAATGGGTGGAAGGAAACAAAATATTGCACTGGATTATTTGGAAGGGTTGCTGCTAATGCACCAAGGACCCATAAATAATTGGAGATCTTCTTTCTTCCCTTTAGCCGACCATGCTCGAATAATTTCGCTAGTAACTAAACACAGCGTCCTCTACTGCCTTGAAGTTGCCAAATATTATGATGGCCAAAATGAAAACAATGTGGACAAGGAACTTCAGGTTTTACTCCAAGGACTGAGCTATATTCCTGGATTTTACTATGAAAAAGATGTGTCATATGTTGAGTTCTTGAATAGAGTCCGAAGTGGAGAGTTGAAGCTACAGTCACAAGGACTGTGGGATGTTCCTCACCCGTGGCTTAATTTGTTTATACCAAAATCTCAAATCAAGGATTTTGACTCTGGCGTATTCAAGAACATCATCCTTAAACGAAACATCACCACAGGACCTGTCTTGGTTTACCCCATGAATAGACACAAGTGGGACAATAGGATGTCAGCATCAATACCAGACGAGGATATCTTCTACACAGTTGGATTTTTGCATTCAAGTGGGTTTGATAATTGGAAGGCCTATGATGCTCAAAATAAAGAAATTTTGCAATTTTGTAATGATTCTGGGATCAAGGTTAAGCAATATCTTCCCCACTACCGCACACAAGAAGATTGGACAAACCATTTTGGCCCTAAATGGAGGACTTTTGTAGAAAGAAAACATCAGTTTGATCCAAGGATGATTCTATCACCTGGACAAAGAATCTTTAATAATTAA 1608 0.4646 MAAQKYPSPTYIILLLITVTRLISTVGKTSSRKTVSSRELVSVSRDDTVFRNLREDAEALEGVSRDYGNMVRDVPLAVFNPTSVQDIGRLIKLSYDGSVPFKVAARGQGHSTRGQAMAREGVVVDMAGFRERGNGVGIRVSDVDPNNGYYVDVGGEQLWIDVLHATLKHGLAPMSWTDYLYLTVGGTLSNAGISGQTFRYGPQISTVRQMDVITGKGEFVTCSPQTNSELFHAALGGLGQFGIITRARIALAPAPERVKWVRLLYNDFSAFTKDQEQLILMGGRKQNIALDYLEGLLLMHQGPINNWRSSFFPLADHARIISLVTKHSVLYCLEVAKYYDGQNENNVDKELQVLLQGLSYIPGFYYEKDVSYVEFLNRVRSGELKLQSQGLWDVPHPWLNLFIPKSQIKDFDSGVFKNIILKRNITTGPVLVYPMNRHKWDNRMSASIPDEDIFYTVGFLHSSGFDNWKAYDAQNKEILQFCNDSGIKVKQYLPHYRTQEDWTNHFGPKWRTFVERKHQFDPRMILSPGQRIFNN 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01360 535 Gene3D - 56 533 IPR016167 -
Pste2g01360 535 Gene3D - 126 256 IPR016169 -
Pste2g01360 535 PANTHER GULONOLACTONE OXIDASE 41 534 - -
Pste2g01360 535 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 255 533 IPR015345 GO:0009690|GO:0019139|GO:0050660
Pste2g01360 535 Gene3D - 257 492 IPR016170 -
Pste2g01360 535 ProSiteProfiles PCMH-type FAD-binding domain profile. 71 254 IPR016166 GO:0071949
Pste2g01360 535 Pfam FAD binding domain 75 223 IPR006094 GO:0050660
Pste2g01360 535 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 75 110 IPR006093 GO:0016491
Pste2g01360 535 SUPERFAMILY FAD-binding/transporter-associated domain-like 54 253 IPR036318 GO:0050660
Pste2g01360 535 SUPERFAMILY FAD-linked oxidases, C-terminal domain 255 534 IPR016164 GO:0003824|GO:0050660
Pste2g01360 535 FunFam Cytokinin dehydrogenase 2 257 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01360 Pste-Chr2 14913459 14917182 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03664 6 25819231 25822998 Pste2g01360 2 14913459 14917182 PCT