Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01322 ATGAATTCTTCACAAGGGTCTCCCATTGCTGGTTTCGTGGACAATGCACCTTCCATTCAGAGGAAGGAATCTAGCTTTGATGGTGTTCCTGTGTATGTTAAGGAGCTAATTGCTGGAGGCTTTGCTGGTGCGCTTGCCAAGACTACTGTTGCTCCCCTCGAACGGGTCAAGATACTTTGGCAGACAAGGACGGCAGGATTTCATTCCCTTGGGGTTTATCAATCTATGAACAGGCTATTCAAGCACGAAGGTTTTCTAGGATTATACAAGGGAAATGGAGCTAGTGTTATTCGCATTATTCCATACGCAGCCTTGCACTTTATGACTTATGAGCGCTACAAAAGTTGGATCTTGAATAATTATCCTGTGTTGGGTTCGGGTCCTTTCATTGATCTTTTAGCAGGCTCTGCTGCTGGAGGAACTTCAGTTTTATGTACCTACCCCTTGGATCTTGCTCGTACCAAACTTGCTTACCAGGTGGCGGACACAAGAGGAAGTATCAAAGATGGCATGAAAGGAGTTCAACCTGCACGTAATGGCATTAAAAGTGTGCTTACAAGCGTCTATAAGGAAGGGGGAGTTCGTGGACTATATAGGGGAGCAGGACCAACCCTTACTGGAATTCTTCCATATGCTGGTTTAAAGTTCTACATGTATGAGAAATTGAAGACTCATGTTCCTGAAGAACATCAAAAGTCAATAATGATGCGTCTTTCTTGTGGAGCTCTAGCTGGATTATTTGGGCAGACTTTAACCTACCCTTTAGATGTGGTCAAGAGACAGATGCAGGTTGGTAGCCTGCAAAATGCTGCTCATGAGGATGCCAGATACAAAAATACACTTGACGGACTTATGACGATTGCTCGTAATCAAGGATGGAGGCAGCTGTTTCATGGAGTTAGCATCAACTATATAAGGATTGTTCCTTCAGCGGCAATTAGTTTCACCACATACGACATGGCGAAGTCTTGGCTTGGCGTACCACCTCAACAAAAATCTCAATCTGTTTCAGCAGCGTGA 1020 0.4431 MNSSQGSPIAGFVDNAPSIQRKESSFDGVPVYVKELIAGGFAGALAKTTVAPLERVKILWQTRTAGFHSLGVYQSMNRLFKHEGFLGLYKGNGASVIRIIPYAALHFMTYERYKSWILNNYPVLGSGPFIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVADTRGSIKDGMKGVQPARNGIKSVLTSVYKEGGVRGLYRGAGPTLTGILPYAGLKFYMYEKLKTHVPEEHQKSIMMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQNAAHEDARYKNTLDGLMTIARNQGWRQLFHGVSINYIRIVPSAAISFTTYDMAKSWLGVPPQQKSQSVSAA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01322 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 225 IPR018108 -
Pste2g01322 339 Gene3D Mitochondrial carrier domain 30 326 IPR023395 -
Pste2g01322 339 SUPERFAMILY Mitochondrial carrier 33 319 IPR023395 -
Pste2g01322 339 PANTHER SOLUTE CARRIER FAMILY 25 32 327 - -
Pste2g01322 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 324 IPR018108 -
Pste2g01322 339 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Pste2g01322 339 PRINTS Mitochondrial carrier protein signature 141 159 IPR002067 GO:0055085
Pste2g01322 339 PRINTS Mitochondrial carrier protein signature 241 263 IPR002067 GO:0055085
Pste2g01322 339 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Pste2g01322 339 PRINTS Mitochondrial carrier protein signature 91 111 IPR002067 GO:0055085
Pste2g01322 339 PRINTS Mitochondrial carrier protein signature 48 62 IPR002067 GO:0055085
Pste2g01322 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 30 116 IPR018108 -
Pste2g01322 339 Pfam Mitochondrial carrier protein 128 227 IPR018108 -
Pste2g01322 339 Pfam Mitochondrial carrier protein 232 325 IPR018108 -
Pste2g01322 339 Pfam Mitochondrial carrier protein 32 120 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01322 Pste-Chr2 14563009 14568112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01322 20 307 Organic Solute Cotransporters AT4G26180 55.326 2.62e-115 334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01322 2 14563009 14568112 Pste2g01322 2 14563009 14568112 ECH