Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01242 GGTTGTGGTCCTTTGGCTTCAGAAGCTGAGTCTCCAAGGATCACTCACACAGAGACAAGGAGCAAGGGATGCGTTTACACCGAAGATGAAAGCATCATAATAAACCCCCAGTTTGATGATGGCCTGAATAATTGGTCTGGAAGAGGCTGCAAGATTGCATTACATGATTCCATGGGAGACGGGAAAATTCTTCCAAAATATGGTAAATTCTTTGCATCTGCAACAGAACGTACACAAAGCTGGAACGGAATTCAGCAGGAGATCACTGGAAGAGTGCAGCGCAAGCTTGCCTATGAGGTTACTGCTGTAGTTCGGATATTTGGGAACAATGCCAATACTTCAGACATAAGGGCTACTTTGTACGTTCAAGCGCCAGATCTTCGAGAGCAATATATAGGCATTGCCAATGTACAGGCAACAGATAAAGATTGGGTTGAAATGCAGGGGAAGTTCCTTCTAAATGGTTCCCCATCAAAAATAGTAGTTTATTTGGAAGGTCCCCCAGCTGGCACTGACATTCTTGTCAATACTTTGGTTATAAAACATGCACCTAAAACACCACCTTCAACACTCCCGGATTGTGAGGATGCTGCTTTTGGTGTTAATATAATTGAAAACAGTAATCTGGGCAATGGCACCAATGGATGGTTTCCCCTCGGTAATTGTACTTTGAGCGTTGGAAATGGTTCACCGCGTGTAATTCCTCCAATGGCTAGAGACTCTCTTGGGCCTCATGAATCCTTAAGTGGGCGCTACATTCTTGTAACCAATCGAACACAAACATGGATGGGTCCGGCTCAGATGATCACAGAGAAATTGAAACTCTTTCTAACATATCAAGTATCTGCTTGGGTTCGAATTGGTTCGGGAGCAACTGGGCCTCAGAATGTGAATGTTGCCCTTAGTGTTGACAACCAGTGGGTCAACGGGGGACAAGTTGAGGTTGCTGATGGCAGGTGGCATGAAATTGGTGGGTCTTTTAGAATTGAAAAGCAACCATCAAAAGTAATGGTTTATATTCAAGGTCCTGCTTCTGGTGTTGACTTAATGCTTGCTGGACTTCAAATTTTTGCTGCTGATAGACGGGCAAGGTTTAAATATTTGAGGAGGCAGACAGACAAGATTCGTAAGCGTGATATTACCCTGAAATTCTCTGGGCTAGACGAAATTGGAAATCTTGGAACCTTAGTGAGAGTTAGACAAATACAAAACGATTTTCCCATTGGATCGTGCATTAGTAGAAGCAATATTGACAATGAAGATTTTGTTGACTTCTTTGTGAAACACTTTAACTGGGCTGTTTTTGGGAATGAGTTGAAGTGGTATTGGACTGAACCACAGCAAGGGAAATTGAATTACAAGGATGCTGATGAAATGTTAGACTTATGTCAGAAGAACAAGATAGAAACCCGAGGTCATTGTATCTTCTGGGAAGTTGACAGCACTGTTCAACAATGGATAAAATCACTGAATAAAACTGATTTGATGGCAGCCGTCCAAACCCGCTTAAATGACTTATTGACTCGCTACAAAGGCAAGTTCAGGCATTATGATGTTAACAACGAAATGTTGCATGGTTCTTTTTATCAGGATAGACTAGGTAAGGATATAAGGGCAAACATGTTCAAGACTGCACACCAACTAGATCCATCTGCTGCCCTATTTGTGAATGATTATCATGTTGAAGATGGATGTGACACCAGATCATCCCCAGATAAGTACATTCAACATATTCTTGATTTGCAAGGACAAGGTGCTCCAGTTGGGGGAATTGGAATTCAAGCTCACATAGATAGTCCCGTGGGGCCTATTGTTTGTTCTGCACTTGATAAAATGGGAACACTTGGCATACCAATATGGTTTACTGAGCTTGACGTGTCTTCCACTAATGAATATGTAAGAGCTGATGATCTAGAAGTTATGCTGCGAGAAGCCTTAGCACACCCTGCCATAGATGGTGTAATGCTCTGGGGATTTTGGGAGTTGTTTATGAGCAGGGAAAATTCGCACTTGGTGAATGCAGAAGGGGAACTCAACGAAGCTGGGAAAAGATACCTTGCTCTCAAACAAGAATGGTTGTCTCACAGCCATGGTTATGTTGATGAACAAGGGCAGTTTAACTTCAGAGGTTTCAGCGGAACATACAACGTGGAAGTTGTCACCTTAGCAAAGAAAGTTTCTAAGACATTCGTTGTTGACAAAGGTGACTCATCATCACTGGTGGTATCAATCGATTTA 2238 0.424 GCGPLASEAESPRITHTETRSKGCVYTEDESIIINPQFDDGLNNWSGRGCKIALHDSMGDGKILPKYGKFFASATERTQSWNGIQQEITGRVQRKLAYEVTAVVRIFGNNANTSDIRATLYVQAPDLREQYIGIANVQATDKDWVEMQGKFLLNGSPSKIVVYLEGPPAGTDILVNTLVIKHAPKTPPSTLPDCEDAAFGVNIIENSNLGNGTNGWFPLGNCTLSVGNGSPRVIPPMARDSLGPHESLSGRYILVTNRTQTWMGPAQMITEKLKLFLTYQVSAWVRIGSGATGPQNVNVALSVDNQWVNGGQVEVADGRWHEIGGSFRIEKQPSKVMVYIQGPASGVDLMLAGLQIFAADRRARFKYLRRQTDKIRKRDITLKFSGLDEIGNLGTLVRVRQIQNDFPIGSCISRSNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGKLNYKDADEMLDLCQKNKIETRGHCIFWEVDSTVQQWIKSLNKTDLMAAVQTRLNDLLTRYKGKFRHYDVNNEMLHGSFYQDRLGKDIRANMFKTAHQLDPSAALFVNDYHVEDGCDTRSSPDKYIQHILDLQGQGAPVGGIGIQAHIDSPVGPIVCSALDKMGTLGIPIWFTELDVSSTNEYVRADDLEVMLREALAHPAIDGVMLWGFWELFMSRENSHLVNAEGELNEAGKRYLALKQEWLSHSHGYVDEQGQFNFRGFSGTYNVEVVTLAKKVSKTFVVDKGDSSSLVVSIDL 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01242 746 Gene3D - 26 182 - -
Pste2g01242 746 Gene3D - 196 357 - -
Pste2g01242 746 PANTHER GLYCOSYL HYDROLASE 192 739 IPR044846 GO:0004553|GO:0005975
Pste2g01242 746 Pfam Carbohydrate binding domain 202 345 IPR003305 GO:0016798
Pste2g01242 746 Pfam Carbohydrate binding domain 31 168 IPR003305 GO:0016798
Pste2g01242 746 FunFam Glycosyl hydrolase family 10 protein 26 182 - -
Pste2g01242 746 SUPERFAMILY (Trans)glycosidases 396 696 IPR017853 -
Pste2g01242 746 PRINTS Glycosyl hydrolase family 10 signature 470 482 IPR001000 GO:0004553|GO:0005975
Pste2g01242 746 PRINTS Glycosyl hydrolase family 10 signature 584 596 IPR001000 GO:0004553|GO:0005975
Pste2g01242 746 PRINTS Glycosyl hydrolase family 10 signature 552 563 IPR001000 GO:0004553|GO:0005975
Pste2g01242 746 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 616 626 IPR031158 -
Pste2g01242 746 MobiDBLite consensus disorder prediction 1 21 - -
Pste2g01242 746 Gene3D Glycosidases 393 699 - -
Pste2g01242 746 FunFam Endo-1,4-beta-xylanase A 394 696 - -
Pste2g01242 746 SUPERFAMILY Galactose-binding domain-like 200 360 IPR008979 -
Pste2g01242 746 FunFam Glycosyl hydrolase family 10 protein 198 357 - -
Pste2g01242 746 Coils Coil 671 691 - -
Pste2g01242 746 Pfam Glycosyl hydrolase family 10 402 659 IPR001000 GO:0004553|GO:0005975
Pste2g01242 746 SMART glyco_10 439 689 IPR001000 GO:0004553|GO:0005975
Pste2g01242 746 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 393 688 IPR001000 GO:0004553|GO:0005975
Pste2g01242 746 SUPERFAMILY Galactose-binding domain-like 29 185 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01242 Pste-Chr2 13750738 13754909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01242 25 746 Glycoside Hydrolase AT1G58370 73.343 0.0 1149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01242 2 13750738 13754909 Pste2g01242 2 13750738 13754909 ECH