Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01228 ATGGCTCCTATGAAGACTTTTGTGTGCATTTGTTTTATAAGCTTATTCGTGTATGTTAGTGCAGTTAAAGTCACTCATGATGGAAGAGCCATCAAAATTGATGGGAAAAGGAGGCTGCTAATATCTGGATCAATTCATTATCCTAGAAGCACTCCTCAGATGTGGCCTGATTTGATTAGAAAAGCAAAAGAAGGAGGGTTAGATACTATTGAAACCTACGTTTTCTGGAATGCACATGAACCTGTTCGTCGTGAATATGATTTCACTGGCAACAATGATCTCATCAGATTTCTCAAGACCATTCAAGATCAGGGACTTTTTGCTGTGCTTCGTATTGGGCCTTATGTTTGTGCCGAATGGAATTATGGAGGAATCCCTGTGTGGGTTCACAACCTACCTGGTGTAGAGATTCGGACGGCAAACAAAGTTTACATGAATGAAATGCAAAATTTCACCGCTTTGATTGTGAATATGGTGAGAAAAGAGAAATTGTTTGCTTCACAAGGAGGTCCTATAATTCTATCTCAGATCGAGAATGAATATGGGAATGTGATGTCGACTTATGGGGATGCTGGCAAAGCTTATATAGATTGGTGTGCTAACATGGCTGAATCCTTCAAAATTGGGGTTCCATGGATCATGTGCCAACAATCTGATGCTCCTCAACCAATGATCAATACATGCAATGGTTGGTATTGTCATGACTTCGAGTCCAATAACCCAAACAGTCCTAAGATGTGGACTGAAAACTGGGTTGGCTGGTTCAAGAATTGGGGTGGCAGAGATCCACACAGAACTGCGGAAGATGTAGCCTATGCTGTTGCTAGGTTTTTCCAAACCGGAGGCACATTCCAAAACTATTATATGTACCACGGTGGAACTAATTTTGGCAGAACAGCTGGTGGCCCATACATTACTACTACATACGATTACGACGCTCCTCTTGATGAATATGGAAACATTGCTCAACCAAAATGGGGCCACCTCAAAGAGCTTCACAGGGTTCTGAAATCAATGGAGAATAGTCTAACCAATTATGCAAACGTATCTGAAATTGACTTGGACAACTCTGTAAAGGCTACTGTGTACGCCACAAAGGATTCATCAAGCTGCTTCTTGACCAACACCAACACCAGTTTTGATGCCACAGTAACATTCAGAGGAAATAAATATAATGTTCCTGCTTGGTCTGTTAGTCTTCTTCCAGATTGCCATACTGAAGAGTACAACACAGCCAAGGTGAATGTTCAAACCTCCCTAATGGTCAAGGGTGAAAACAAAGCTGAAGATGAGCCAATGGCTTTGAAATGGGTGTGGAGAGCTGAGAATATTGATGATGCTCTCCTTGGTAAAGGAAATTTCTCTGCAAATACACTCATTGATCAAAAGAGAGCTGCTGCTGATGCCAGTGACTATCTTTGGTACATGACAAGACTTGATATTGATCAACATGATGCTGTTTGGTCAGCTAACATGTCTCTTAGGATTAATGGCAGCGGCCATGTAGTTCATGCATTCGTCAATGGAGAACATATCGGTTCCCATTGGGCCACATATGGTATCCGCAACGATAAATTTGAGCCTAGCATTAAGTTGAAGCCCGGAAAGAATATTATCAGTCTGCTTAGTGTCACAGTTGGACTTCAGAACTATGGGGGAGACTATGATAAATGGCACTCTGGTCTTGTTGGGCCTATTGAGTTAATTGGTAGAAAAGATGATGAAACCGTCGTCAAAGATCTATCCTTACACAAATGGTCCTACAAGTTAGGGTTGCATGGTATGGATAACAAATTCTTCAGTGAAGACTCACTTTATGCTCCTGCTTCCAAATGGGAATCTGAACACCTATCCTTAAACAGGATGCTCACTTGGTACAAGACCACTTTCAAAGCTCCTCTTGGGTCAGATCCTGTTGTTGTGGATATGCAAGGAATGGGAAAAGGTTATGCTTGGGTGAATGGTCAAAATATTGGTCGCATTTGGCCTAGTTATGATGCAACTGAAGAAGGTTGTAGTGATGATCCTTGTGACTACCGTGGTGAATATAGTGACAAAAAATGTGTTACTAATTGTGGCAAACCCACACAGAGATGGTATCATGTCCCTCGCTCCTTTATTCGAGATGGTCTTAACACATTGGTTTTGTTTGAGGAAATTGGGGGGAATCCATCACTAGTAAATTTCAAAACAGTTTATGTTGGCACTGCTTGTGGAAATACTCATGAGAATAAGACTTTGGAATTGTCCTGCCATGGACGTCCCATTTCGGCTATAAAGTTTGCAAGTTTCGGGAATCCACAAGGTGAATGTGGAACATTTAGTAAGGGCAGTTGCGAAAGCAAAAGGGATGCTTTGTCCATTCTTCAAAATGCATGCGTGGGGAAGGAATCGTGCACAATTGATGTTTCAGAAAAAACATTCGGGCCAACTAGTTGTGGAGATATTACCATGAGACTCGCCGTGGAAGCAGTTTGTTAA 2481 0.4172 MAPMKTFVCICFISLFVYVSAVKVTHDGRAIKIDGKRRLLISGSIHYPRSTPQMWPDLIRKAKEGGLDTIETYVFWNAHEPVRREYDFTGNNDLIRFLKTIQDQGLFAVLRIGPYVCAEWNYGGIPVWVHNLPGVEIRTANKVYMNEMQNFTALIVNMVRKEKLFASQGGPIILSQIENEYGNVMSTYGDAGKAYIDWCANMAESFKIGVPWIMCQQSDAPQPMINTCNGWYCHDFESNNPNSPKMWTENWVGWFKNWGGRDPHRTAEDVAYAVARFFQTGGTFQNYYMYHGGTNFGRTAGGPYITTTYDYDAPLDEYGNIAQPKWGHLKELHRVLKSMENSLTNYANVSEIDLDNSVKATVYATKDSSSCFLTNTNTSFDATVTFRGNKYNVPAWSVSLLPDCHTEEYNTAKVNVQTSLMVKGENKAEDEPMALKWVWRAENIDDALLGKGNFSANTLIDQKRAAADASDYLWYMTRLDIDQHDAVWSANMSLRINGSGHVVHAFVNGEHIGSHWATYGIRNDKFEPSIKLKPGKNIISLLSVTVGLQNYGGDYDKWHSGLVGPIELIGRKDDETVVKDLSLHKWSYKLGLHGMDNKFFSEDSLYAPASKWESEHLSLNRMLTWYKTTFKAPLGSDPVVVDMQGMGKGYAWVNGQNIGRIWPSYDATEEGCSDDPCDYRGEYSDKKCVTNCGKPTQRWYHVPRSFIRDGLNTLVLFEEIGGNPSLVNFKTVYVGTACGNTHENKTLELSCHGRPISAIKFASFGNPQGECGTFSKGSCESKRDALSILQNACVGKESCTIDVSEKTFGPTSCGDITMRLAVEAVC 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01228 826 CDD Gal_Rha_Lectin_BGal 742 826 - -
Pste2g01228 826 PRINTS Glycosyl hydrolase family 35 signature 303 319 IPR001944 GO:0004553|GO:0005975
Pste2g01228 826 PRINTS Glycosyl hydrolase family 35 signature 167 182 IPR001944 GO:0004553|GO:0005975
Pste2g01228 826 PRINTS Glycosyl hydrolase family 35 signature 283 298 IPR001944 GO:0004553|GO:0005975
Pste2g01228 826 PRINTS Glycosyl hydrolase family 35 signature 648 664 IPR001944 GO:0004553|GO:0005975
Pste2g01228 826 PRINTS Glycosyl hydrolase family 35 signature 34 51 IPR001944 GO:0004553|GO:0005975
Pste2g01228 826 PRINTS Glycosyl hydrolase family 35 signature 55 73 IPR001944 GO:0004553|GO:0005975
Pste2g01228 826 PRINTS Glycosyl hydrolase family 35 signature 110 129 IPR001944 GO:0004553|GO:0005975
Pste2g01228 826 PRINTS Glycosyl hydrolase family 35 signature 621 635 IPR001944 GO:0004553|GO:0005975
Pste2g01228 826 PRINTS Glycosyl hydrolase family 35 signature 246 261 IPR001944 GO:0004553|GO:0005975
Pste2g01228 826 Pfam Beta-sandwich domain in beta galactosidase 347 414 IPR041392 -
Pste2g01228 826 SUPERFAMILY Galactose-binding domain-like 398 571 IPR008979 -
Pste2g01228 826 FunFam Beta-galactosidase 581 672 - -
Pste2g01228 826 SUPERFAMILY (Trans)glycosidases 23 339 IPR017853 -
Pste2g01228 826 Gene3D - 729 826 IPR043159 -
Pste2g01228 826 ProSiteProfiles SUEL-type lectin domain profile. 741 826 IPR000922 GO:0030246
Pste2g01228 826 PANTHER BETA-GALACTOSIDASE RELATED 19 771 IPR001944 GO:0004553|GO:0005975
Pste2g01228 826 Gene3D - 376 571 - -
Pste2g01228 826 SUPERFAMILY Galactose-binding domain-like 584 746 IPR008979 -
Pste2g01228 826 Pfam Glycosyl hydrolases family 35 32 334 IPR031330 -
Pste2g01228 826 FunFam Beta-galactosidase 288 416 - -
Pste2g01228 826 Gene3D - 590 672 - -
Pste2g01228 826 Pfam Galactose binding lectin domain 749 826 IPR000922 GO:0030246
Pste2g01228 826 Gene3D Glycosidases 21 340 - -
Pste2g01228 826 FunFam Beta-galactosidase 20 340 - -
Pste2g01228 826 FunFam Beta-galactosidase 441 578 - -
Pste2g01228 826 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 169 181 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01228 Pste-Chr2 13559094 13564027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01228 1 826 Glycoside Hydrolase AT1G31740 61.957 0.0 1090
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01228 2 13559094 13564027 Pste2g01228 2 13559094 13564027 ECH