Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01221 CCACACCAACCTAAGTTTTTCACATGTTCGAAAACCCGTGATAACTCTCCGAGTGTCACTCACTAAGTACTCGTGCTTCTGTTCTCGATTTTAGTAGAGGTACTTTGTAGTGTTTGTAATGAACTTGCTGTCTAGGAAGGTTTGTCTGGACTCCCACGGCCAAGACTCTTCTTACTTTCTAGGATGGCAAGAATACGAGAAAAATCCTTATCACCCAATTCAAAATCAAACAGGAATCATTCAGATGGGACTTGCAGAGAATCAGCTTTCATTTGACCTTCTTAAATCATGGCTTCGAAGAAATCCAGATACAATGGGCTTGAAGAAAAATGGAATATCCATTTTTAAAGAGCTTGCTTTGTTCCAAGATTACCACGGGTTACCAGCTTTAAAAACTGAACTGGTGGAGTTTATGGGAAAAATAAGAGGAGATGGAATAAAATTTGGTAGGGAGAATCTGATCCTCACAGCCGGTGCAACTGCCGCGAATGAGATTCTGATGTTTTGCCTTGCTGATCCAGGGGAGGCCTTCATTCTTCCCACACCCTATTATCCTGGGTTTGATAGAGATTTGAAATGGAGAACTGGGGTTGAGATTATTCCAGTGCATTGCTCGAGCTCAAATGGCTTCAGAATAACCTCCTCTGCTTTACAACAAGCCTTTGAAGAAGCTCAAAAATTGAATCTCAACGTTAAAGGGGTCCTAGTAACCAACCCCTCAAACCCATTGGGCATAACCATGAGCAAAACAGAGCTTAACCTTCTTGTGGATTTTGCAATTGACAACAACATTCACATAATAAGCGATGAAATATACTCGGGGACAGTGTTCGACTCACCCAAATTCATTAGCATCATGGAAGTGGTGAGTGAGAGAATTAGTATGAAAAATAACAATGGCATCTGCAATCGCATTCACATCGTTTATAGTCTCTCGAAAGACCTTGGCATACCGGGATTTCGAGTAGGCATGATTTACTCAAACAACAAAATGGTTGTGGCTGCTGCAACAAAAATGTCAAGCTTTGGATTAGTGTCCTCGCAAACTCAATATTTGGTGGCTAACTTACTGAAGGACAAGAAATTCACTTTGAAGTACATGGAAGAGACACAGAGGAGGCTCAAGAGGCGCAAGGAGATGCTCGTGTCTGGGCTCTGGAACGCAGGGATTCGGTGTCTGAAAAGTAATGCTGGGTTGTTCTGTTGGGTGGATATGAGACATTTATTAAGCTCTCCCACTTTCAAAGCAGAGAAAGAGCTTTGGGTGAAGATTCTTTACCGGGTTGGATTGAACATATCTCCTGGCTCTTCTTGCCACTGCTGTGAACCCGGGTGGTTCAGGATATGCTTTGCCAACATGTCTGAAGACACATTGAAAGTTGCAATGCGACGGATGAAGGCTTTTACAAACTCAACCATCTCGGCCATCAATGATTACACTCATCAGCAATGGAATTGC 1459 0.4263 MNLLSRKVCLDSHGQDSSYFLGWQEYEKNPYHPIQNQTGIIQMGLAENQLSFDLLKSWLRRNPDTMGLKKNGISIFKELALFQDYHGLPALKTELVEFMGKIRGDGIKFGRENLILTAGATAANEILMFCLADPGEAFILPTPYYPGFDRDLKWRTGVEIIPVHCSSSNGFRITSSALQQAFEEAQKLNLNVKGVLVTNPSNPLGITMSKTELNLLVDFAIDNNIHIISDEIYSGTVFDSPKFISIMEVVSERISMKNNNGICNRIHIVYSLSKDLGIPGFRVGMIYSNNKMVVAAATKMSSFGLVSSQTQYLVANLLKDKKFTLKYMEETQRRLKRRKEMLVSGLWNAGIRCLKSNAGLFCWVDMRHLLSSPTFKAEKELWVKILYRVGLNISPGSSCHCCEPGWFRICFANMSEDTLKVAMRRMKAFTNSTISAINDYTHQQWNC 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01221 447 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 271 284 IPR004838 GO:0003824|GO:0009058|GO:0030170
Pste2g01221 447 Gene3D Aspartate Aminotransferase, domain 1 29 425 IPR015422 GO:0003824
Pste2g01221 447 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 11 428 - -
Pste2g01221 447 FunFam 1-aminocyclopropane-1-carboxylate synthase 2 296 425 - -
Pste2g01221 447 Pfam Aminotransferase class I and II 41 425 IPR004839 GO:0009058|GO:0030170
Pste2g01221 447 CDD AAT_like 82 428 - -
Pste2g01221 447 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 225 248 - -
Pste2g01221 447 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 113 133 - -
Pste2g01221 447 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 297 320 - -
Pste2g01221 447 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 76 92 - -
Pste2g01221 447 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 189 213 - -
Pste2g01221 447 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 265 289 - -
Pste2g01221 447 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 43 69 - -
Pste2g01221 447 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 135 156 - -
Pste2g01221 447 SUPERFAMILY PLP-dependent transferases 10 429 IPR015424 -
Pste2g01221 447 Gene3D - 63 320 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01221 Pste-Chr2 13435974 13443379 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01221 2 13435974 13443379 Pste2g01221 2 13435974 13443379 ECH